Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec05g2366 | ATGAACTGTCTTCAAAACCTTTCAATATCATTTTCTTTCCCGTTCCGGAGCTTCAAATGCCGACAGAGACAGCCTGAATTCCAGCTCTGTAACCTGGTGATAAGGAACTTTACCGATCTACATCGACGTTCTATCGTGAAGGCAGTGTCTGGCTCTACATCAAGTGCTGAAATGAGTGGCGCAGAGGTGGATGATGCCGAGGAAAAGGAGGAAAAATCTGAAATATACAGCCATAACATGACAGAAGCTATGGGTGCTGTATTGACGTATAGACATGAGCTGGGAATGAACTACAACTTTATTCGTCCAGATTTAATTGTAGGATCATGCCTACAGACTCCAGAGGATGTTGACAAGCTCCGCAGCATTGGAGTAAAAACAGTTTTCTGCTTGCAGCAAGATCCAGATTTGGAATATTTTGGGGTTGACATTGGTGCTATAATAGCATATACAAAGACATTTGATGATATTGAACATTTACGAGCTCAAATAAGGGATTTTGATGCATTTGACCTACGGCTAAGATTACCAGCTGTTGTAAGCAAATTTCATAAAGCCATAAACCGAAATGGTGGAGTGGCTTACATACATTGCACTGCTGGACTTGGAAGGGCTCCTGCTGTTGCGATGGCGTATATGTTTTGGGTTCAAGGCTACAAACTCAATGAGGCTCTAGAATTACTTCTGAGCAAACGCTCATGCTTCCCAAAAATAGATGCTATTAAAAATGCAACAGCCGATATTCTTTTAGGATTTAGAAAGAAGCCTGTCACTTTATCATGGGAAGATGACCAATGCTCAACTGTAGAAGTATCTGGACTTGATATTGGATGGGGCCAGAGGATTCCATTAAAATTCGACGAGGCACGAGGTGCATGGATTCTCAATAGGGAACTGCCGGAAGGACGATATGAATACAAATACATTATCGATGGTATATGGACGTGCAACGAAAACGAGCCCGTCACTCCACCCAACAAAGATGGCCACGTCAACAATTTCATTGAAGTTGTTGAAGAGGAGGATCCGGGTAGTGATAGGGCAATTCTTCGGGGAAGGTTAACCGGAGATGAAGCAAAACTCACAGCCGAAGAAAGAAGCAAAATAAGAGAATTTCTTGAAGCTTGCCCAGATGAAAATTGA | 1143 | 42.43 | MNCLQNLSISFSFPFRSFKCRQRQPEFQLCNLVIRNFTDLHRRSIVKAVSGSTSSAEMSGAEVDDAEEKEEKSEIYSHNMTEAMGAVLTYRHELGMNYNFIRPDLIVGSCLQTPEDVDKLRSIGVKTVFCLQQDPDLEYFGVDIGAIIAYTKTFDDIEHLRAQIRDFDAFDLRLRLPAVVSKFHKAINRNGGVAYIHCTAGLGRAPAVAMAYMFWVQGYKLNEALELLLSKRSCFPKIDAIKNATADILLGFRKKPVTLSWEDDQCSTVEVSGLDIGWGQRIPLKFDEARGAWILNRELPEGRYEYKYIIDGIWTCNENEPVTPPNKDGHVNNFIEVVEEEDPGSDRAILRGRLTGDEAKLTAEERSKIREFLEACPDEN | 380 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 34932563 | 34939262 | - | CePI673135_05g023660.1 | Cec05g2366 | 204169 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec05g2366 | 380 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 97 | 254 | IPR020422 | GO:0006470(InterPro) | |
Cec05g2366 | 380 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 94 | 238 | IPR029021 | - | |
Cec05g2366 | 380 | CDD | DSP_laforin-like | 96 | 243 | IPR045204 | GO:0019203(InterPro) | |
Cec05g2366 | 380 | CDD | E_set_AMPKbeta_like_N | 256 | 337 | - | - | |
Cec05g2366 | 380 | Pfam | Glycogen recognition site of AMP-activated protein kinase | 256 | 340 | IPR032640 | - | |
Cec05g2366 | 380 | Gene3D | Immunoglobulins | 252 | 344 | IPR013783 | - | |
Cec05g2366 | 380 | SUPERFAMILY | E set domains | 255 | 337 | IPR014756 | - | |
Cec05g2366 | 380 | Pfam | Dual specificity phosphatase, catalytic domain | 153 | 235 | IPR000340 | GO:0016311(InterPro) | |
Cec05g2366 | 380 | SMART | dsp_5 | 97 | 243 | IPR020422 | GO:0006470(InterPro) | |
Cec05g2366 | 380 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 174 | 232 | IPR000387 | GO:0016311(InterPro) | |
Cec05g2366 | 380 | FunFam | Phosphoglucan phosphatase DSP4, chloroplastic | 90 | 271 | - | - | |
Cec05g2366 | 380 | FunFam | Phosphoglucan phosphatase DSP4, chloroplastic | 252 | 342 | - | - | |
Cec05g2366 | 380 | PANTHER | DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN | 3 | 379 | IPR052832 | GO:0005983(PANTHER)|GO:0009507(PANTHER)|GO:0019203(PANTHER)|GO:0046838(PANTHER)|GO:2001070(PANTHER) | |
Cec05g2366 | 380 | Gene3D | Protein tyrosine phosphatase superfamily | 90 | 372 | IPR029021 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec05g2366 | Cec-Chr5:34932563 | Cec07g0550 | Cec-Chr7:6567984 | 3.30E-37 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec05g2366 | - | - | - | 0.0 |