Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g2368 ATGTTGGCAATGGAGAAGGATTTTGATGCCAAGTTGATGATTCAAAGCAACGCTTCTAATGGCGGCAATGTTCAGAGATCCAAGAGCTTTGCCTTTCGAGCTCCTCAGGAGAATTTTACAATTCAGGATTTTGAATTGGGAAAGATTTATGGGGTTGGTTCATATTCCAAGGTTGTGAGGGCGAAGAAGAAGGACACAGGAATTGTATATGCATTGAAGATAATGGACAAAAAATTCATCACCAAAGAAAATAAAACTGCTTATGTGAAGTTGGAAAGAATTGTACTTGATCAGTTGGACCATCCTGGTGTTGTCAGACTATTTTTTACCTTTCAGGATACTTTTTCTTTGTACATGGCATTGGAGTCTTGTGAAGGTGGAGAGCTTTTTGATCAGATAACTAGGAAAGGTCGTCTGTCAGAGGATGAAGCTCGGTTTTATACTGCAGAAGTGGTCGATGCCCTCGAATACATACACAACATGGGATTGATACACCGTGATATCAAGCCTGAAAACTTGCTACTTACTTCTGATGGACATATCAAAATAGCTGATTTTGGGAGTGTAAAGCCTATGGTTGATAGTCGAATTACTGTTCTCCCGAATGCAGCATCAGATGATAAAGCATGTACATTTGTGGGAACTGCTGCATATGTTCCTCCAGAAGTCCTTAATTCCTCCCCTGCAACTTTCGGAAATGACCTTTGGGCGCTCGGGTGCACCTTGTACCAGATGCTTTCAGGGACTTCTCCTTTTAAGGATGCAAGTGAGTGGCTTATTTTCCAAAAAATTGTAGCACGAGATATAAAATTCCCCAGCTATTTTTCTGAGCAAGCAAGGGACCTCATCGACCACCTATTGGATTTAGATCCCATCAAGAGACCGGGTGCCGGAGCAGAGGGTTATACTTCTCTCAAGAATCATCCCTTCTTTGAGGGGGTTGATTGGAACAACATAAGAGCACAAACTCCTCCCAGGCTTGCTTTAGAAGCAGGGAGTCATTCGAATGAGAACGATGATGGCTCCGAGTCCACTTGGAATCCTTCACATGTTGGAGACGGTGCATCAAGACAAAATGATGGGAATGCTGGTTCTGCATCAACTTCTGAAGGCTCACATCATATTACTCGACTTGCATCGATTGACTCCTTTGATTCAAAATGGCAACAATTCCTTGAGCCTGGAGAATCTGTTCTTATGATCTCAATGGTGAAAAAACTTCAGAAGCTAACAAGCAAAAAAGTTCAACTCATCCTCACCAACAAACCAAAGTTGATTTATGTTGATCCTTCAAAGCTCATTGTCAAGGGGAATATTATTTGGTCTGACAATCCTAATGACCTCAACATTCAAGTGACTAGTCCTTCACATTTCAAGATTTGCACACCAAAGAAGATTGCTTCTTTTGAGGATGCGAAACAGCGAGCATGGCAGTGGAAGAAGGCAATCGAGGGGCTTCAGAATCGGTGA 1470 42.18 MLAMEKDFDAKLMIQSNASNGGNVQRSKSFAFRAPQENFTIQDFELGKIYGVGSYSKVVRAKKKDTGIVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITRKGRLSEDEARFYTAEVVDALEYIHNMGLIHRDIKPENLLLTSDGHIKIADFGSVKPMVDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQKIVARDIKFPSYFSEQARDLIDHLLDLDPIKRPGAGAEGYTSLKNHPFFEGVDWNNIRAQTPPRLALEAGSHSNENDDGSESTWNPSHVGDGASRQNDGNAGSASTSEGSHHITRLASIDSFDSKWQQFLEPGESVLMISMVKKLQKLTSKKVQLILTNKPKLIYVDPSKLIVKGNIIWSDNPNDLNIQVTSPSHFKICTPKKIASFEDAKQRAWQWKKAIEGLQNR 489
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 34968503 34973465 + CePI673135_05g023680.1 Cec05g2368 204171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g2368 489 Pfam PH domain 386 488 IPR033931 -
Cec05g2368 489 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec05g2368 489 Gene3D Phosphorylase Kinase; domain 1 42 127 - -
Cec05g2368 489 ProSiteProfiles Protein kinase domain profile. 44 311 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g2368 489 MobiDBLite consensus disorder prediction 330 372 - -
Cec05g2368 489 FunFam 3-phosphoinositide-dependent protein kinase 2-like 128 326 - -
Cec05g2368 489 PANTHER SERINE/THREONINE-PROTEIN KINASE 29 325 IPR050236 GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER)
Cec05g2368 489 SMART serkin_6 44 311 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g2368 489 MobiDBLite consensus disorder prediction 338 372 - -
Cec05g2368 489 FunFam 3-phosphoinositide-dependent protein kinase 1 359 489 - -
Cec05g2368 489 FunFam 3-phosphoinositide-dependent protein kinase 2-like 42 127 - -
Cec05g2368 489 SUPERFAMILY PH domain-like 305 488 - -
Cec05g2368 489 Gene3D Transferase(Phosphotransferase) domain 1 128 323 - -
Cec05g2368 489 CDD STKc_PDK1 42 311 IPR039046 GO:0004674(InterPro)
Cec05g2368 489 Coils Coil 469 489 - -
Cec05g2368 489 SUPERFAMILY Protein kinase-like (PK-like) 41 363 IPR011009 -
Cec05g2368 489 Pfam Protein kinase domain 45 311 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g2368 489 Gene3D - 357 489 IPR011993 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g2368 Cec-Chr5:34968503 Cec06g1858 Cec-Chr6:31937018 1.70E-54 dispersed
Cec05g2368 Cec-Chr5:34968503 Cec02g1120 Cec-Chr2:24727069 9.30E-48 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72033 PF00069 Pkinase 1.30E-65 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g2368 K06276 - csv:101212874 940.258