Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec05g2368 | ATGTTGGCAATGGAGAAGGATTTTGATGCCAAGTTGATGATTCAAAGCAACGCTTCTAATGGCGGCAATGTTCAGAGATCCAAGAGCTTTGCCTTTCGAGCTCCTCAGGAGAATTTTACAATTCAGGATTTTGAATTGGGAAAGATTTATGGGGTTGGTTCATATTCCAAGGTTGTGAGGGCGAAGAAGAAGGACACAGGAATTGTATATGCATTGAAGATAATGGACAAAAAATTCATCACCAAAGAAAATAAAACTGCTTATGTGAAGTTGGAAAGAATTGTACTTGATCAGTTGGACCATCCTGGTGTTGTCAGACTATTTTTTACCTTTCAGGATACTTTTTCTTTGTACATGGCATTGGAGTCTTGTGAAGGTGGAGAGCTTTTTGATCAGATAACTAGGAAAGGTCGTCTGTCAGAGGATGAAGCTCGGTTTTATACTGCAGAAGTGGTCGATGCCCTCGAATACATACACAACATGGGATTGATACACCGTGATATCAAGCCTGAAAACTTGCTACTTACTTCTGATGGACATATCAAAATAGCTGATTTTGGGAGTGTAAAGCCTATGGTTGATAGTCGAATTACTGTTCTCCCGAATGCAGCATCAGATGATAAAGCATGTACATTTGTGGGAACTGCTGCATATGTTCCTCCAGAAGTCCTTAATTCCTCCCCTGCAACTTTCGGAAATGACCTTTGGGCGCTCGGGTGCACCTTGTACCAGATGCTTTCAGGGACTTCTCCTTTTAAGGATGCAAGTGAGTGGCTTATTTTCCAAAAAATTGTAGCACGAGATATAAAATTCCCCAGCTATTTTTCTGAGCAAGCAAGGGACCTCATCGACCACCTATTGGATTTAGATCCCATCAAGAGACCGGGTGCCGGAGCAGAGGGTTATACTTCTCTCAAGAATCATCCCTTCTTTGAGGGGGTTGATTGGAACAACATAAGAGCACAAACTCCTCCCAGGCTTGCTTTAGAAGCAGGGAGTCATTCGAATGAGAACGATGATGGCTCCGAGTCCACTTGGAATCCTTCACATGTTGGAGACGGTGCATCAAGACAAAATGATGGGAATGCTGGTTCTGCATCAACTTCTGAAGGCTCACATCATATTACTCGACTTGCATCGATTGACTCCTTTGATTCAAAATGGCAACAATTCCTTGAGCCTGGAGAATCTGTTCTTATGATCTCAATGGTGAAAAAACTTCAGAAGCTAACAAGCAAAAAAGTTCAACTCATCCTCACCAACAAACCAAAGTTGATTTATGTTGATCCTTCAAAGCTCATTGTCAAGGGGAATATTATTTGGTCTGACAATCCTAATGACCTCAACATTCAAGTGACTAGTCCTTCACATTTCAAGATTTGCACACCAAAGAAGATTGCTTCTTTTGAGGATGCGAAACAGCGAGCATGGCAGTGGAAGAAGGCAATCGAGGGGCTTCAGAATCGGTGA | 1470 | 42.18 | MLAMEKDFDAKLMIQSNASNGGNVQRSKSFAFRAPQENFTIQDFELGKIYGVGSYSKVVRAKKKDTGIVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDTFSLYMALESCEGGELFDQITRKGRLSEDEARFYTAEVVDALEYIHNMGLIHRDIKPENLLLTSDGHIKIADFGSVKPMVDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQKIVARDIKFPSYFSEQARDLIDHLLDLDPIKRPGAGAEGYTSLKNHPFFEGVDWNNIRAQTPPRLALEAGSHSNENDDGSESTWNPSHVGDGASRQNDGNAGSASTSEGSHHITRLASIDSFDSKWQQFLEPGESVLMISMVKKLQKLTSKKVQLILTNKPKLIYVDPSKLIVKGNIIWSDNPNDLNIQVTSPSHFKICTPKKIASFEDAKQRAWQWKKAIEGLQNR | 489 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 34968503 | 34973465 | + | CePI673135_05g023680.1 | Cec05g2368 | 204171 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec05g2368 | 489 | Pfam | PH domain | 386 | 488 | IPR033931 | - | |
Cec05g2368 | 489 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 163 | 175 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec05g2368 | 489 | Gene3D | Phosphorylase Kinase; domain 1 | 42 | 127 | - | - | |
Cec05g2368 | 489 | ProSiteProfiles | Protein kinase domain profile. | 44 | 311 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec05g2368 | 489 | MobiDBLite | consensus disorder prediction | 330 | 372 | - | - | |
Cec05g2368 | 489 | FunFam | 3-phosphoinositide-dependent protein kinase 2-like | 128 | 326 | - | - | |
Cec05g2368 | 489 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 29 | 325 | IPR050236 | GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER) | |
Cec05g2368 | 489 | SMART | serkin_6 | 44 | 311 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec05g2368 | 489 | MobiDBLite | consensus disorder prediction | 338 | 372 | - | - | |
Cec05g2368 | 489 | FunFam | 3-phosphoinositide-dependent protein kinase 1 | 359 | 489 | - | - | |
Cec05g2368 | 489 | FunFam | 3-phosphoinositide-dependent protein kinase 2-like | 42 | 127 | - | - | |
Cec05g2368 | 489 | SUPERFAMILY | PH domain-like | 305 | 488 | - | - | |
Cec05g2368 | 489 | Gene3D | Transferase(Phosphotransferase) domain 1 | 128 | 323 | - | - | |
Cec05g2368 | 489 | CDD | STKc_PDK1 | 42 | 311 | IPR039046 | GO:0004674(InterPro) | |
Cec05g2368 | 489 | Coils | Coil | 469 | 489 | - | - | |
Cec05g2368 | 489 | SUPERFAMILY | Protein kinase-like (PK-like) | 41 | 363 | IPR011009 | - | |
Cec05g2368 | 489 | Pfam | Protein kinase domain | 45 | 311 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec05g2368 | 489 | Gene3D | - | 357 | 489 | IPR011993 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec05g2368 | Cec-Chr5:34968503 | Cec06g1858 | Cec-Chr6:31937018 | 1.70E-54 | dispersed | |
Cec05g2368 | Cec-Chr5:34968503 | Cec02g1120 | Cec-Chr2:24727069 | 9.30E-48 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72033 | PF00069 | Pkinase | 1.30E-65 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec05g2368 | K06276 | - | csv:101212874 | 940.258 |