Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g2378 ATGTCCGACAAATTCACTCACCCAGATCTCCAGCAACTCATGGCCGACAAACCCAACTTTCCGACCACCGCCCCACAAACCCTAAACTCCTTCTTCCTCCACCACTCTCACCTGACACGTGGATTCTCTCCGGCGCCACCGCCACCGCTCCCCAAGTTCCAGCCTCTCCAGCTCGTCCTCACCGACCCCACCGGTTTGCCGGATGAGCTGCTTCATTTTGGCTGTTCCGATAATTCCACTACCGCTGGCGGCGTCGGGTCTTCCACGGGCACCGCCGCCGCATCGTCAGCTCCATTTTTGCGGCGGAATAAGTTGGTAATGGATAGTGAATGGTGTCCTTATGGAAACGACGTCGTTGGAGGAAGTATTAATGGAGCTAACAGTAGATGGCCAAGACAGGAAACCCTCACTCTTCTTGAGATCAGATCTCGTCTTGATTCCAAGTTTAAAGAGAGTAATCAGAAAGGTCCACTTTGGGATCAGGTTTCTAGAATGATGGCGGAGGAATATGGGTACAAAAGAAGTGGGAAGAAATGCAAAGAAAAGTTCGACAATTTGTACAAATACTACAAGAAAACAAAGGAAGGTAAAACTGGGAGACATGACGGGAAGCACTACAGATTCTTTCGTCAACTCGAAGCCATTTACGGCCAATCCAACGACCAATTATCATCACCAATTATAGAATCTAACTTCTACAGAAACTCCGCCACCGGATCGGAAACTCCGCCTCCCGGAAAACTCCCTGGAGAGAATCATCAAGAACCGCCCAATAATAATCATCAAGAAGCTGGCGGAATGAGCCTAAGCTTTTCAATATCATCTGATTTTGAAACGTCGTCGTCCGGGAACTACCACGACGACGATCTGTCGGCCATAGCATTTATGATGAACCAGAGGAAGGTAGAGAAATCGAGGGAAAACGACATGTCGAAAGGGGAGGGTGGTGTTAATAAGCTGGAAGGGAGTTGGAGAGAGGAGGTAGAGAAAATGGTTGATATGAAGTTTAGTACATTAATGGAAGTGCAAGAAAATTGGATGGAGAAGATAATGGCAAGTGTTGAAGATGGAGAAAAAGAGAGGATTGTGAAAGAGGAAGAATGGAGGAAGCAAGAAGTGGCTAGGTTTGATCATGAGATGCGTGAGTTTTGTGCGAGGGAAAGAGATTGGCTTCATGCTCGAGAACTTGCTTTCATGGAAATTGTGAAGAAATTTGCTGGCAAAGGGTAA 1230 47.15 MSDKFTHPDLQQLMADKPNFPTTAPQTLNSFFLHHSHLTRGFSPAPPPPLPKFQPLQLVLTDPTGLPDELLHFGCSDNSTTAGGVGSSTGTAAASSAPFLRRNKLVMDSEWCPYGNDVVGGSINGANSRWPRQETLTLLEIRSRLDSKFKESNQKGPLWDQVSRMMAEEYGYKRSGKKCKEKFDNLYKYYKKTKEGKTGRHDGKHYRFFRQLEAIYGQSNDQLSSPIIESNFYRNSATGSETPPPGKLPGENHQEPPNNNHQEAGGMSLSFSISSDFETSSSGNYHDDDLSAIAFMMNQRKVEKSRENDMSKGEGGVNKLEGSWREEVEKMVDMKFSTLMEVQENWMEKIMASVEDGEKERIVKEEEWRKQEVARFDHEMREFCARERDWLHARELAFMEIVKKFAGKG 409
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 35110296 35113294 + CePI673135_05g023780.1 Cec05g2378 204181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g2378 409 Gene3D - 130 192 - -
Cec05g2378 409 Pfam Myb/SANT-like DNA-binding domain 128 215 IPR044822 -
Cec05g2378 409 FunFam trihelix transcription factor PTL-like 130 192 - -
Cec05g2378 409 ProSiteProfiles Myb-like domain profile. 122 187 IPR001005 -
Cec05g2378 409 CDD GT1 128 194 - -
Cec05g2378 409 PANTHER FI21293P1 118 407 - -
Cec05g2378 409 MobiDBLite consensus disorder prediction 234 267 - -
Cec05g2378 409 MobiDBLite consensus disorder prediction 253 267 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g2378 Cec-Chr5:35110296 Cec10g1946 Cec-Chr10:34281072 2.30E-47 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29649 PF13837 Myb_DNA-bind_4 1.20E-19 CL0123 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g2378 - - - 0.0