Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g2384 ATGCCCAGTCTCCTTCCTTCCCCTCCTCCTCTTCTTCTTCTTCTCTCTTCTGCGGCGCCATTTTTACTGCGCCTCTCTTCGCTCCGACACCGTCCCCGATTCCCACGGGATTTAAGCTTTGAGAACTTCAGCACTTTTCGTAGACTCGATGGAACAGTTGAGAAGATTGGAGAAGGAACTTATGGTGTAGTTTACAAGGCACGCGATCGTGTCACAAATGAGACTATTGCGTTGAAGAAGATCCGTTTGGAGCAAGAAGATGAGGGAGTGCCAAGCACAGCCATTCGTGAAATTTCACTGTTGAAGGAAATGCAACATGGCAACATTGTAAGGTTACAAGATGTAGTGCATAGCGAGAAGCGGCTGTATCTTGTTTTTGAGTATCTGGATTTGGATTTGAAGAAGCATATGGACTCCTCTCCTGAATTTGCAAAGGATCCACGCCAAGTAAAAATGTTTCTTTATCAAATTCTTCGTGGCATTGCATACTGTCATTCTCATAGAGTTCTTCACCGAGATCTAAAACCCCAAAATCTACTGATTGATCGTCGTACCAATGCCCTGAAGCTTGCTGATTTTGGACTGGCAAGAGCGTTTGGTATTCCTGTTAGAACATTCACGCATGAGGTGGTGACCCTTTGGTACAGAGCACCAGAAATATTACTTGGTTCCCGACATTATTCCACCCCCGTGGATGTGTGGTCAGTGGGTTGTATATTTGCTGAGATGGTTAATCAGCGGCCATTGTTCCCTGGAGACTCTGAGATTGATGAACTGTTTAAGATATTTAGAGTTCTGGGAACTCCAAATGAAGATACGTGGCCTGGTGTTACATCTTTGCCTGATTTTAAATCTGCTTTCCCCAAGTGGCCTCCCAAGGACCTGGCTTCTGTAGTTCCTAATCTTGAAGCCGCTGGCATTGATCTTCTCTCTAAAATGCTTTGCTTGGATCCCACCAAAAGAGTCACTGCCAGGAGTGCCCTCGAGCATGAATACTTCAAAGATGTTGGGTTTGTTCCCTGA 1023 45.36 MPSLLPSPPPLLLLLSSAAPFLLRLSSLRHRPRFPRDLSFENFSTFRRLDGTVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFAKDPRQVKMFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPPKDLASVVPNLEAAGIDLLSKMLCLDPTKRVTARSALEHEYFKDVGFVP 340
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 35169465 35174804 + CePI673135_05g023840.1 Cec05g2384 204187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g2384 340 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec05g2384 340 FunFam Cell division control protein 2 homolog 132 338 - -
Cec05g2384 340 Pfam Protein kinase domain 53 333 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g2384 340 Gene3D Phosphorylase Kinase; domain 1 51 130 - -
Cec05g2384 340 SUPERFAMILY Protein kinase-like (PK-like) 53 336 IPR011009 -
Cec05g2384 340 Gene3D Transferase(Phosphotransferase) domain 1 132 338 - -
Cec05g2384 340 ProSitePatterns Protein kinases ATP-binding region signature. 56 79 IPR017441 GO:0005524(InterPro)
Cec05g2384 340 PANTHER CELL DIVISION PROTEIN KINASE 53 333 IPR050108 GO:0000082(PANTHER)|GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0004693(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)|GO:0010033(PANTHER)|GO:0010389(PANTHER)|GO:0010468(PANTHER)|GO:0030332(PANTHER)|GO:0051445(PANTHER)
Cec05g2384 340 SMART serkin_6 50 333 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g2384 340 CDD STKc_CDK1_CdkB_like 53 333 - -
Cec05g2384 340 ProSiteProfiles Protein kinase domain profile. 50 333 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g2384 340 FunFam Cell division control protein 2 49 130 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g2384 Cec-Chr5:35169465 Cec11g1943 Cec-Chr11:33537186 1.90E-92 dispersed
Cec11g1559 Cec-Chr11:29869735 Cec05g2384 Cec-Chr5:35169465 6.70E-24 dispersed
Cec05g2384 Cec-Chr5:35169465 Cec08g1784 Cec-Chr8:28927488 3.30E-76 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72034 PF00069 Pkinase 1.50E-79 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g2384 K02206 - csv:101217311 578.17