Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec05g2384 | ATGCCCAGTCTCCTTCCTTCCCCTCCTCCTCTTCTTCTTCTTCTCTCTTCTGCGGCGCCATTTTTACTGCGCCTCTCTTCGCTCCGACACCGTCCCCGATTCCCACGGGATTTAAGCTTTGAGAACTTCAGCACTTTTCGTAGACTCGATGGAACAGTTGAGAAGATTGGAGAAGGAACTTATGGTGTAGTTTACAAGGCACGCGATCGTGTCACAAATGAGACTATTGCGTTGAAGAAGATCCGTTTGGAGCAAGAAGATGAGGGAGTGCCAAGCACAGCCATTCGTGAAATTTCACTGTTGAAGGAAATGCAACATGGCAACATTGTAAGGTTACAAGATGTAGTGCATAGCGAGAAGCGGCTGTATCTTGTTTTTGAGTATCTGGATTTGGATTTGAAGAAGCATATGGACTCCTCTCCTGAATTTGCAAAGGATCCACGCCAAGTAAAAATGTTTCTTTATCAAATTCTTCGTGGCATTGCATACTGTCATTCTCATAGAGTTCTTCACCGAGATCTAAAACCCCAAAATCTACTGATTGATCGTCGTACCAATGCCCTGAAGCTTGCTGATTTTGGACTGGCAAGAGCGTTTGGTATTCCTGTTAGAACATTCACGCATGAGGTGGTGACCCTTTGGTACAGAGCACCAGAAATATTACTTGGTTCCCGACATTATTCCACCCCCGTGGATGTGTGGTCAGTGGGTTGTATATTTGCTGAGATGGTTAATCAGCGGCCATTGTTCCCTGGAGACTCTGAGATTGATGAACTGTTTAAGATATTTAGAGTTCTGGGAACTCCAAATGAAGATACGTGGCCTGGTGTTACATCTTTGCCTGATTTTAAATCTGCTTTCCCCAAGTGGCCTCCCAAGGACCTGGCTTCTGTAGTTCCTAATCTTGAAGCCGCTGGCATTGATCTTCTCTCTAAAATGCTTTGCTTGGATCCCACCAAAAGAGTCACTGCCAGGAGTGCCCTCGAGCATGAATACTTCAAAGATGTTGGGTTTGTTCCCTGA | 1023 | 45.36 | MPSLLPSPPPLLLLLSSAAPFLLRLSSLRHRPRFPRDLSFENFSTFRRLDGTVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFAKDPRQVKMFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSAFPKWPPKDLASVVPNLEAAGIDLLSKMLCLDPTKRVTARSALEHEYFKDVGFVP | 340 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 35169465 | 35174804 | + | CePI673135_05g023840.1 | Cec05g2384 | 204187 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec05g2384 | 340 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 169 | 181 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec05g2384 | 340 | FunFam | Cell division control protein 2 homolog | 132 | 338 | - | - | |
Cec05g2384 | 340 | Pfam | Protein kinase domain | 53 | 333 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec05g2384 | 340 | Gene3D | Phosphorylase Kinase; domain 1 | 51 | 130 | - | - | |
Cec05g2384 | 340 | SUPERFAMILY | Protein kinase-like (PK-like) | 53 | 336 | IPR011009 | - | |
Cec05g2384 | 340 | Gene3D | Transferase(Phosphotransferase) domain 1 | 132 | 338 | - | - | |
Cec05g2384 | 340 | ProSitePatterns | Protein kinases ATP-binding region signature. | 56 | 79 | IPR017441 | GO:0005524(InterPro) | |
Cec05g2384 | 340 | PANTHER | CELL DIVISION PROTEIN KINASE | 53 | 333 | IPR050108 | GO:0000082(PANTHER)|GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0004693(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)|GO:0010033(PANTHER)|GO:0010389(PANTHER)|GO:0010468(PANTHER)|GO:0030332(PANTHER)|GO:0051445(PANTHER) | |
Cec05g2384 | 340 | SMART | serkin_6 | 50 | 333 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec05g2384 | 340 | CDD | STKc_CDK1_CdkB_like | 53 | 333 | - | - | |
Cec05g2384 | 340 | ProSiteProfiles | Protein kinase domain profile. | 50 | 333 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec05g2384 | 340 | FunFam | Cell division control protein 2 | 49 | 130 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec05g2384 | Cec-Chr5:35169465 | Cec11g1943 | Cec-Chr11:33537186 | 1.90E-92 | dispersed | |
Cec11g1559 | Cec-Chr11:29869735 | Cec05g2384 | Cec-Chr5:35169465 | 6.70E-24 | dispersed | |
Cec05g2384 | Cec-Chr5:35169465 | Cec08g1784 | Cec-Chr8:28927488 | 3.30E-76 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72034 | PF00069 | Pkinase | 1.50E-79 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec05g2384 | K02206 | - | csv:101217311 | 578.17 |