Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec05g2404 | ATGGGGGTGCCTGCAACTGCAACTTTGGGGGATGATTTTCTGAGAGAAAGAGCGGCTAAGATGAGAGAATCACTGCAAAAGAGCCAAACTATTACTGATAACGTTGTCACCATTCTCGGTTCCTTTGACCACCGTCTTTCAGCTCTCGAAACCGCCATGCGCCCTACTCAGATCAGAACCAATTCTATTCGTAAAGCTCACGAGAACATTGATAAGACTTTGAAGGCTGCGGAGGTTATTTTAGCACAATTTGATCTCTCTCGTCAGGCAGAAACGAAAATACTTAGAGGGCCACATGAGGATTTGGAAAGTTATCTCGGGGCTATTGGTCAATTAAGAAACATTATCAAATTCTTTAGTGGCCATAAAGGTTTTAAGAGTAGCGAGGTAGTGCTTAACCAGGCAAATACGCTGCTTGCAAAAGCCATCTCAAAGCTGGAAGATGAGTTCAGACAGCTATTATCTTCCTACAGCAAACCTGTGGAGCCTGAGCGTCTTTTCGATTGCCTGCCAAAATCGTTGCAACCATCTTCAGAATCTCCTGGTCATGATTCAGGTGCAAAGAATCACTCCTCAAATCCTCATTCTGCACATCATGATAATAGCTTAGAGACTGCTGTCTACACACCTCCCACTCTCATACCACCACGTGTTCTACCACTGCTGCATGATTTATCACAGCAAATGGTTCAAGCTGGTCATCAACAACAAATTTTAAAAATCTACAGGGATACCCGTTCAGTCGTTCTGGAAGAAAGCCTACGAAAATTAGGAGTTGAAAAACTTAGCAAAGATGATGTCCAGAAGATGGCATGGGAGGTTTTAGAGGCAAAAATTGGGAACTGGATTCATTTTATGCGTATTGCAGTTAAACTGCTATTTGCTGGTGAACGAAAAGTTTGCGATCAAATATTTGAAGGCTTCGAATCGCTTAGAGACCAATCATTTGCAGAGGTTACAAGTAGTAGTGTGTCTGTGCTATTCAGTTTTGGGGAGGCGATTGCAAAAAGCAAGAGGTCACCAGAAAAGTTGTTTGTACTTTTGGACATGTATGAAATTATGCGAGAGCTTCACTCTGAGATAGAGACAATTTTTAAGGGTAAAGCATGCAATGAGATCAAGGAATCTGCATCGGGTTTGACCAAACGGCTTGCTCAGACAGCTAAGGATACATTTGGTGATTTTGAGGAAGCTGTTGAAAAAGATGCCACAAAAACTGCGGTGTTGGATGGAACTGTTCATCCTTTAACAAGCTATGTGATTAATTATGTCAAATTTCTTTTTGACTATCAAGCAACCTTGAAGCAACTTTTTCAAGAATTTGAAGATAGTGGTCAAACGAATTCGGAATTGGCCACTGTCACAATGCAAATAATGCAGGCTCTTCAATCTAATTTGGATGGAAAATCTAAGCATTACAGAGACCCTGCTTTGACTCACTTATTCCTCATGAACAACATTCACTATATAGTTAGATCTGTTCGCAGATCTGAAGCCAAGGATTTGCTAGGGGACGATTGGGTTCAGAGACATAGGAGGATCGTACAACAGCATGCAAATCAGTATAAAAGGAATGCTTGGTCAAAGATTCTGCAATGTCTCTCTGTTCAAGGGTTAACTTCATCTGGCGGTGGCAGTGTACCTGGTATAGATGGAGGAAATAGTAGCGGAGTTTCTAAGGCGCTTATTAAAGACAGGTTCAAGACTTTCAACATGCAGTTTGAGGAACTGCATCAAAGACAATCTCAATGGGCAGTTCCCGATACTGAGTTGCGGGAGTCTCTAAGACTTTCAGTTGCTGAAGTCTTACTTCCTGCATACAGATCCTTCCTAAAACGTTTTGGGCCACTGATTGATGGTGGAAAGAATCCCCAAAAGTATGTCAGATACCAGCCCGAGGATCTCGAAAGGATGCTCGGAGAATTTTTCGAAGGGAAGAACTTGAGTGAACCTAAGCGATCATTACGAGCCCTCTTCGTCAATGTTTTTATAGATTTAGAAAATTTCATAGTGGATCAGAACGAGAATGAATTCGAAAATTCAGGACATACTCATCTTGGCTCCACTCTCTTTTGGGGAGGAGTTTTTACATCTCGAGAGGCCAAAAAAGATGACACGCTGCGCGCCATTGAAGACTACCAAAATGAAGTTGTGGACGCAAAGGCTACCGGCTTTGCTTCGCTGCCGAGAAAATTGGACCATTCTCGAAGAATCAAACTCGCTCCGGTAATCATCAACTTCTTTCTTCTTCGTCTCACTCATCTGCATATTTGTTTCATCATTCTCTTCTCTTTACTTTATCTGGAACAATCTGGAAATTCCTTCTATACTAGGCTTCCTTCCTTACTGTTCCTAGAAATGCCGGGAGATGGTGGAATCACTGCGGATCCAACCATCGAAGCCTGCAGCAAGGAGGCAAGCGACTCCAAATTCGCGAAGCGTTTTGCCGACGATATCATGCCTCACATCCTCAATCTGTATGGATCTTCTGCAACGCCTCGGGATTTTGAAATCTACGCTCCCGATGCTTCGTTCGAGGATCCATTAACGAGAGCTCACGGAGTGAAGGAAATCAAATCGGCATTTTATTCTTTGTCCAAGGTCTTTAGTGAATCAAGAATTGTGGAATACAATGTCAAAGAAAAACTTATTTCTCCTGGAAAACACGAGATTATAGTCGATAATAAGCAACACTACAAGTTTATGGGAAGAAACATAGATTTGGAATCACTCATCAAGTTGTATGTTGTTGAAGGAAAAATAGTTCGTCATGAGGACTGGTGGAATAAGAAACCACTTTTGAACAGAGAAACAGTCCAGTTACCAATGGTTGGTCGAATTTTAGAAATGACTCGCAGATGTACAATGTTAGCAACTCATGCAATGATGGGATTTGGAAAAGATTAA | 2907 | 41.86 | MGVPATATLGDDFLRERAAKMRESLQKSQTITDNVVTILGSFDHRLSALETAMRPTQIRTNSIRKAHENIDKTLKAAEVILAQFDLSRQAETKILRGPHEDLESYLGAIGQLRNIIKFFSGHKGFKSSEVVLNQANTLLAKAISKLEDEFRQLLSSYSKPVEPERLFDCLPKSLQPSSESPGHDSGAKNHSSNPHSAHHDNSLETAVYTPPTLIPPRVLPLLHDLSQQMVQAGHQQQILKIYRDTRSVVLEESLRKLGVEKLSKDDVQKMAWEVLEAKIGNWIHFMRIAVKLLFAGERKVCDQIFEGFESLRDQSFAEVTSSSVSVLFSFGEAIAKSKRSPEKLFVLLDMYEIMRELHSEIETIFKGKACNEIKESASGLTKRLAQTAKDTFGDFEEAVEKDATKTAVLDGTVHPLTSYVINYVKFLFDYQATLKQLFQEFEDSGQTNSELATVTMQIMQALQSNLDGKSKHYRDPALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRIVQQHANQYKRNAWSKILQCLSVQGLTSSGGGSVPGIDGGNSSGVSKALIKDRFKTFNMQFEELHQRQSQWAVPDTELRESLRLSVAEVLLPAYRSFLKRFGPLIDGGKNPQKYVRYQPEDLERMLGEFFEGKNLSEPKRSLRALFVNVFIDLENFIVDQNENEFENSGHTHLGSTLFWGGVFTSREAKKDDTLRAIEDYQNEVVDAKATGFASLPRKLDHSRRIKLAPVIINFFLLRLTHLHICFIILFSLLYLEQSGNSFYTRLPSLLFLEMPGDGGITADPTIEACSKEASDSKFAKRFADDIMPHILNLYGSSATPRDFEIYAPDASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYNVKEKLISPGKHEIIVDNKQHYKFMGRNIDLESLIKLYVVEGKIVRHEDWWNKKPLLNRETVQLPMVGRILEMTRRCTMLATHAMMGFGKD | 968 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 35320135 | 35332345 | - | CePI673135_05g024040.1 | Cec05g2404 | 204207 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec05g2404 | 968 | MobiDBLite | consensus disorder prediction | 173 | 201 | - | - | |
Cec05g2404 | 968 | Pfam | Exocyst complex component Exo70 N-terminal | 73 | 155 | - | - | |
Cec05g2404 | 968 | Gene3D | Exocyst complex component Exo70 | 78 | 653 | - | - | |
Cec05g2404 | 968 | SUPERFAMILY | NTF2-like | 818 | 934 | IPR032710 | - | |
Cec05g2404 | 968 | FunFam | Exocyst subunit Exo70 family protein | 88 | 651 | - | - | |
Cec05g2404 | 968 | MobiDBLite | consensus disorder prediction | 171 | 201 | - | - | |
Cec05g2404 | 968 | SUPERFAMILY | Cullin repeat-like | 80 | 644 | IPR016159 | - | |
Cec05g2404 | 968 | PANTHER | EXOCYST COMPLEX PROTEIN EXO70 | 17 | 646 | IPR004140 | GO:0000145(InterPro)|GO:0000145(PANTHER)|GO:0006887(InterPro)|GO:0006887(PANTHER) | |
Cec05g2404 | 968 | Pfam | Exo70 exocyst complex subunit C-terminal | 281 | 640 | IPR046364 | GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro) | |
Cec05g2404 | 968 | Coils | Coil | 703 | 723 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec04g1189 | Cec-Chr4:31470636 | Cec05g2404 | Cec-Chr5:35320135 | 2.10E-281 | dispersed | |
Cec05g2404 | Cec-Chr5:35320135 | Cec07g1568 | Cec-Chr7:31196133 | 8.10E-104 | dispersed | |
Cec05g2404 | Cec-Chr5:35320135 | Cec03g0196 | Cec-Chr3:2030574 | 6.50E-77 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec05g2404 | K07195 | - | csv:101206262 | 1225.69 |