Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g2466 ATGGCAAAATTTCCTTCAATTTCCCTGTTTTTTCTCCTCTGCAACTTATGCCTTTCCAGGGCTTCTTTGAATGATGAGGCCAATGCCCTTTTATCATTCAAACAATCCATTACTGAAGACCCAGAGGGGTGTTTCAGCAACTGGAATTCTTCCGATGAAACCCCATGTGGTTGGAATGGAGTTACATGCAAGGATCTAAGAGTTGTTTCTCTTAGTATTCCTAAGAAGAAACTTAATGGGGTTATTCCTTCTTCTCTGGGGTTTCTGTCTGAGCTTCGTCATGTGAATCTCAGGAGTAATAAGCTCCATGGAACCTTGCCAATGGAGCTTTTTCAAGCTAATGGAATTCAAAGTTTGGTGCTTTATGGAAATTCCTTCACTGGGTCTCTTCCAAATGAGATTGGTAAGCTAAAAAACCTTCAAATCTTGGATTTGTCTCAGAATTTCTTTAATGGGTCCTTGCCTGTTTCCTTAATGCAATGCACAAGGTTGAGAGTTCTTGATATTGGTCAGAACAATTTTTCCAATTCTCTGCCTACTGGGTTTGGTTCCAGTTTGAATTTCTTGGAAACATTGGATCTTTCTTACAATAAATTTAATGGTTCAATTCCAATGGATATCGGTAATTTGTCTAGCTTACAAGGCACTGTTGATTTCTCACATAATTTGTTTTCTGGCTCTATCCCAGCCAGCCTGGGAAACCTTCCTGAAAAAGTTTATATTGATCTTACTTATAATAATTTGAGTGGTTCAATACCCCAAAATGGTGCTCTTATGAACAGAGGGCCAACTGCTTTTATTGGGAATCCTGGCCTTTGTGGGCCGCCGTTGAAGAACCCATGTTCTTCTGAAACTCCGGGCGCAAGTTCCCCGTCCTCGTTCCCATTTTTCCCAGACAATTATCCACCTGGGAGTTCTGAGGGTAATGGTAATAAGTATGACAAAGGAGGGCTGAGTAAGAGCACTTTGGTTGCAATAATCATCGGTGACATTGTCGGTATTTGCCTGATTGGGTTGCTGTTTTCATATTGCTATTCGAGGTTTTGCACTCATAGAAATGGGAAGAAGGCAGACCAATCTACTTATGGATTTGAGAAGAGTGGAAAAGGAAGAAAAGATTGTCTCTGCTTTCAAAAGGGTGAATCCGAGAACGTTTCGGAGCATATCGAGCAGTTTGATTTGGTACCTCTGGATTCACAAGTGACGTTTGATCTCGACGAACTTCTTAAGGCATCGGCATTTGTTTTGGGAAAAAGTGGTATCGGAATCGTGTATAAAGTTGTGCTTGAAGATGGACTCACTTTAGCTGTGAGAAGATTGGGTGAAGGAGGTTCTCAAAGATTAAAAGAATTTCAAACGGAAGTTGAAGCAATTGGGAAGTTGAGGCATCCGAATGTAGTTAGCCTTAGAGCATATTATTGGTCTGTTGATGAGAAACTGCTTATTTATGATTACATACCAAATGGGAACCTTGCATCTGCTATTCATGGAAAGCCTGGAACATCATCGTTTACACCGTTAGCGTGGTCTGTTCGGTTTAAAATCATGGAAGGCATTGCAAAAGGGTTGGTTTACTTGCACGAGTTTAGCCCGAAAAAGTATGTTCATGGTAATTTGAAAACAAACAACATACTTCTTGGACACGACATGACACCGCATATTTCTAATTTTGGGCTTGCCCGCCTTGTTAACATTGCTGGAGGATCGCCAACTGTGCGATCGAGTCATATAGCAGAGGAAAAACCACAAGAGAAACAACTAAAGTCTGCCACCTCTGAAGCTAGTACATTCAGTTCTAGCATGAGTACTTACTACCAAGCACCAGAAGCGTTCAAAGTCGTGAAGCCATCACAGAAATGGGACGTTTACTCGTATGGTGTGATATTACTTGAAATGATCACCGGAAGGTTGCCTATAGTTCAGGTGGGAGCGTCAGAAATGGATCTTGTTCAATGGATTCAACTCTGCATTGAGGAAAAGAAGCCGCTTTCAGATGTGATAGACCCATCTTTGGCTCCGGACGACGATGCAGACGAGGAGATTATTGCGGTTTTGAAGATAGCATTAGCTTGTGTTCAAAATAGTCCAGAAAGAAGACCTGCAATGAGACATGTTTGTGATGGATTGAGCAGGTTGGGTGTCACTCCAAACTGA 2154 41.6 MAKFPSISLFFLLCNLCLSRASLNDEANALLSFKQSITEDPEGCFSNWNSSDETPCGWNGVTCKDLRVVSLSIPKKKLNGVIPSSLGFLSELRHVNLRSNKLHGTLPMELFQANGIQSLVLYGNSFTGSLPNEIGKLKNLQILDLSQNFFNGSLPVSLMQCTRLRVLDIGQNNFSNSLPTGFGSSLNFLETLDLSYNKFNGSIPMDIGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGSIPQNGALMNRGPTAFIGNPGLCGPPLKNPCSSETPGASSPSSFPFFPDNYPPGSSEGNGNKYDKGGLSKSTLVAIIIGDIVGICLIGLLFSYCYSRFCTHRNGKKADQSTYGFEKSGKGRKDCLCFQKGESENVSEHIEQFDLVPLDSQVTFDLDELLKASAFVLGKSGIGIVYKVVLEDGLTLAVRRLGEGGSQRLKEFQTEVEAIGKLRHPNVVSLRAYYWSVDEKLLIYDYIPNGNLASAIHGKPGTSSFTPLAWSVRFKIMEGIAKGLVYLHEFSPKKYVHGNLKTNNILLGHDMTPHISNFGLARLVNIAGGSPTVRSSHIAEEKPQEKQLKSATSEASTFSSSMSTYYQAPEAFKVVKPSQKWDVYSYGVILLEMITGRLPIVQVGASEMDLVQWIQLCIEEKKPLSDVIDPSLAPDDDADEEIIAVLKIALACVQNSPERRPAMRHVCDGLSRLGVTPN 717
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 35796823 35799053 - CePI673135_05g024660.1 Cec05g2466 204269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g2466 717 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 23 184 - -
Cec05g2466 717 Gene3D Phosphorylase Kinase; domain 1 378 485 - -
Cec05g2466 717 Pfam Leucine Rich Repeat 116 137 IPR001611 GO:0005515(InterPro)
Cec05g2466 717 Pfam Leucine Rich Repeat 189 210 IPR001611 GO:0005515(InterPro)
Cec05g2466 717 Pfam Leucine Rich Repeat 217 235 IPR001611 GO:0005515(InterPro)
Cec05g2466 717 Pfam Leucine Rich Repeat 139 161 IPR001611 GO:0005515(InterPro)
Cec05g2466 717 Pfam Leucine Rich Repeat 163 184 IPR001611 GO:0005515(InterPro)
Cec05g2466 717 MobiDBLite consensus disorder prediction 278 313 - -
Cec05g2466 717 FunFam Leucine-rich repeat receptor-like protein kinase 188 283 - -
Cec05g2466 717 Pfam Protein kinase domain 416 706 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g2466 717 SUPERFAMILY Protein kinase-like (PK-like) 415 707 IPR011009 -
Cec05g2466 717 Gene3D Transferase(Phosphotransferase) domain 1 486 715 - -
Cec05g2466 717 CDD STKc_IRAK 416 712 - -
Cec05g2466 717 ProSiteProfiles Protein kinase domain profile. 410 712 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g2466 717 PANTHER OS05G0588300 PROTEIN 178 712 IPR050994 -
Cec05g2466 717 Pfam Leucine rich repeat N-terminal domain 23 63 IPR013210 -
Cec05g2466 717 FunFam Leucine-rich repeat receptor-like protein kinase 393 485 - -
Cec05g2466 717 SUPERFAMILY L domain-like 24 278 - -
Cec05g2466 717 Gene3D Ribonuclease Inhibitor 182 282 IPR032675 -
Cec05g2466 717 Gene3D Ribonuclease Inhibitor 22 181 IPR032675 -
Cec05g2466 717 FunFam Leucine-rich repeat protein kinase family protein 486 715 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g2466 Cec-Chr5:35796823 Cec10g1964 Cec-Chr10:34432659 1.00E-63 dispersed
Cec02g0841 Cec-Chr2:10121719 Cec05g2466 Cec-Chr5:35796823 5.00E-77 transposed
Cec04g0128 Cec-Chr4:5096488 Cec05g2466 Cec-Chr5:35796823 8.10E-76 transposed
Cec05g1201 Cec-Chr5:11034017 Cec05g2466 Cec-Chr5:35796823 7.70E-73 transposed
Cec11g1436 Cec-Chr11:28520153 Cec05g2466 Cec-Chr5:35796823 1.10E-110 transposed
Cec01g0594 Cec-Chr1:6301208 Cec05g2466 Cec-Chr5:35796823 1.00E-212 wgd
Cec11g0759 Cec-Chr11:8732896 Cec05g2466 Cec-Chr5:35796823 1.40E-133 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72036 PF00069 Pkinase 4.40E-29 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g2466 - - - 0.0