Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g2507 ATGGCTAACGATACTGCTCACCGGAAGCACCGCCGATCTGCTTCCGATGAAGACGATGAGAAATCTTCTAAGCGTCACAAACACCGTCACCATCGCCGCCACCACCGACATCGTCACAGCAGCAATAAGAACGAAGAAGAAAGCTGCCGTGACCAGGAGGATAGTGTTGCTCCTGTTGCTAATCGTAGATCTCGGCCGGAAGATGACGTCGAGGAAGGCGAAATTCTCGAAGAGGAAGAGTCTGGCGTTCGCGAAAACGAGAGCTCGATGAAGGAGGTGGATGTGGAATTTGGGAAATTTGAAGATGATGAAATTTCCGGTAGAATTGACCAGCCCGCTATGGAGTGTCATGAGGTGGATGAATCATCTAAGGCTAATTTAATCGTGAAAGAGGGGGCAGGAAACAGTGCTCAAGATTGGAAGATCTCGAAAGTGGACAGTAAGTTCTATAATTTAGATAAGGAAAAAGGTGGCTATTATGCAAAAATAGATACAGACAAGGAAAACATGATGCTCTATCAAACTGACTCTGGCTGTAAGCATGGCAACGATGGTAGCTTTTCCACGGGTGAAGTGGCTGGAATTAAATACAATAATCTTGAACGTTGTCGAGAGGGTCACAGTAAAGGGGATTTTGGTCACGAATCTCTGAAGTTAGATGAGAGGCAGCACAAACGAATGTTATCTCCTTCTAAAGGGGGTATTAAGAAAATAAGCAACAATGGCAATGGAAAGGTGGCGACAGATGGAAGCACCTTGGGGAATGGGAAAAGGCCACAGTTAGAAAGGACTGAAGACAAGTCTCAGGATTTTACGCCATCAACATCTCAAGATCGATTCATTGACGCATCAGATTGTAGGAGTAGATCGAGGTCAAATTGTCATTCTAGGGGGCAATCTCAGTCTCGTGAAACAGTAGAAGAGGAGGCAGAGTCAAAGAGTAGACATGATCATGGTTGGGATCACCCAATATTTGATGATAAAGGTAAAATTCACACCGACTTGGATGATGATTACACTGAATGTGCTAGGGGAGAGGGAAGGCATCGAAGCAGGGATATGAAGGACAGAGGGAGAAGTAAGATGGAGGTGGATAGGGACTGGTCCAAGGAAAATGAAATGGGAAAAAACAAAGATAAAGATAGGGGGATAGATAAGCAAAAGTATGATGACAGAGAGAGAGGTAGGAGTAAAGATAGAAGAAAGGAGATGGAACAAAACAGGAGCAGGGAGAGAGAGACGGATAGGGATAGGAGAAGGGAAAGGGAAAGGGATGCGGAAAGAGATAGGAGAGTGAAGGAAAGAGGTAGGAGTAGGGAAAGAGAGGTGCAAAGACATAGAAGAGTGGAGAGGGAAAGAGGTTGGAGTAGGGAGAGAGAGGTAGAAAGGGATAGAAGAATGGAGAAGGAGAGAGGTTGGAGCAAGGAAAGAGAGGTGGACAGGGATAGAAGAGCAGAAAAGGAAAGATGTAGGAGCACTGATAGAGAGGGTAATAGGGATAGAAGAAGAGAAAGGGAAAAAGATAGGAGCAAGGAAAAGGAAGTAGATTGGGATGGGAGAAGGGATAGGGACAGGGATCGGAATGATGATAAGGCTGAATATAGTGATAGAAATAGAGACAAGGAAAGGGTGAGAGAGATGCAAAAGGACCGGTATAGGGACAAAGAATTTGATAGGGAGAGACAAGATGATAGAAACAAGAATAAATCCAGTGACATTTTAACTAGTAAGGACAAGTATGGGAATCTTGAACATGGCTATGTTAAAGGTTCTAAGCAGTCTAGGCATTATGATAATGAATTTGGTCTGGATGGGGGAAGAACTAATGCTGTCGAAAAGCAGGGTAGTTTTAAGAGAAATAATCGTGAAGAAGGTGAAGACAAGCTAATGAGTGATCACGATGGGGAGGAAGAGGATGGGGACAGCATGTCATTTCAATTAGCCGATGAAGAAGAGGAGGATCTTAACAGAATCAAGGAGGAGAGTAGAAGACGGAGGCAAGCAATCTTAGAAAAATACAAATGCCAGCAGTTAGAGAAACAAGTAGAGCCTTCTTTGAAGGAATCTGAGAAAGGTAAGGATTCTGCATATGATTCTTCTCAATCAGAAGCTGCTGCTCATGCTATTCCAGAATTGGTTGATGGGGCGGTGGATGATAGTGTTACTGACTCATCTTTTGCTGTGGAGAAATCCCCACAACAAAATGGAGTAAATGCGACGGATAAAACTGCTGGTACTAAAGGACTTGGAGAGGGTACTCCAAAGGCTGAGGGGTCAGATGGATTATTCTGTGATGACATTTTTGGAGAAACACCTGCTGCAGTTCGTAAAATGGGCAAAGGTGATGGTTTGCAGATAGAGAGGAGTGGTCTTCATGACAATTGGGACGATGCGGATGGATATTATAACTACCGATTTGGTGAAGTGCTTGATGGTCGGTATGAAATTGCTGCTGCACATGGCAAAGGTGTTTTTTCAACCGTAGTCCGTGCAAAGGATCTCAAAGCTGGTCATGGCGAACCAGAAGAAGTGGCAATCAAAATTTTGCGTAGTAATGAAACAATGTACAAGGCTGGTCTGGAGGAGTTGGTCATATTGAAAAAGCTAGTAGGTGCAGATCCAGATGACAAGCGTCACTGTGTTCGTTTTCTTTCAAGTTTCAAATATAGGAATCATCTTTGTTTAGTTTTTGAATCTCTTCATATGAATCTCCGTGAGGTCTTGAAGAAATTTGGGCGCAATATTGGCCTTAAGCTAACTGCTGTGAGGGCATACGCTAAGCAGCTTTTTATTGCCCTGAAGCATTTGAGAAACTGTGGTGTTCTCCACTGTGATATAAAGCCGGATAATATGCTGGTTAATGAGGCAAAAAATGTGCTGAAGCTTTGTGATTTTGGTAATGCCATGTTTGCTGGTAAAAATGAAATCACCCCATACCTTGTTAGCCGGTTTTATCGTGCACCTGAAATAATTTTAGGGCTGTCATATGACCATCCAATGGATATCTGGTCTGTGGGTTGCTGTTTGTACGAGCTCTCTACAGGAAAAGTTCTTTTTCCAGGTCCTTCTAATAATGACATGCTGCGCCTACACATGGAATTAAAGGGACCTTTTCCGAAGAAGATGCTTCGTAAGGGAGCATTTACTGACCAACATTTTGACCAGGACCTGAACTTCCATGCTTCTGAGGAGGATCCTGTAACCAAAAAGACCATAAAGCGAATAATAGTCAATATAAAGCCTAAAGATATTGGATCAATTATTAGGGGATCTCCTGGTGAAGATCCAAAGATGTTAGCCAATTTTAAGGATCTTCTAGACAAAATTTTTGTGTTGGATCCAGAAAAAAGGATGACAGTATCACAGGCATTGAATCATCCATTCATCACTGGCAATCTTCTTTATGATGACCTAAGCTTCTGGCACATTTATGGGATGGTTGAATTCAGAAGGGGTCATATTGGTCAGGAGTGGCGGGTTCTTTCAGTCGAATGTACTGTTTCTATTGATGTCTGCTTCTGCTCTGAGAGAACCTTCCAGTGCTTAAGTGAATTAGAGGCACTCAGGAGAAGGATCATTTTTGAACTCTTGATTGTAGTATCTTTGAAATGTTGCTTGGCATCGTTTATGGAGGCACTTGCATTGGAGAGGTTAACTGCTGTGGCACCATGTGAAGTAGTGTTGCAGGCGAACTGCATATCATCCCCATTCTCTTGGCACTTTCAATTAGAGATGCATGAATACGGAAGGATGATCGGCATTGAGCAATCAACCCAAAAGCCTTCTGCAATTCATTCTAAGGGCACCGTGATTCTTTTGTTACGTATCCAGAAAATGCGTTGGGTTGTGAGGGATTTATCAGTTATGAACACAATCGATGAGGTTCTCTGTTTTGTTGCTGGAGAGTCTTTCTATTGGGTGCTCACAATAATCATTTCTCATGGCCTACTTGTTTCTGTGGCTGTTATTCCTATCATCAAGAATTTTCGTATCTTTATTTGTAATGGCAGCTTGAAGCGTAAGCCTAAGAGATTGTTTTTTGGTGCTGTCCATCTAGCAGTAATGTTGCCGCAAGAGGCAATATCCGTGAAATTCATTGTGTCCTCTGAGAAAGTCGTTGAGAACACTATGGTAACTTGCCTGCATACTTGGATTTGTGTTTACAGCAAGACTGCCTCTTTCCCTCCGAGAAAGGAGAAGTTGTCGGAGTTTCCATACCAAAGATTTCTCAGGAACATGGGAAAGAAGCTGGATGCACTGCTGGGAAGAAGCTTCAAGACCACAAGGTTCAAAGCTCTTGTGAATCTGGCCATATCTCGCCTCGCTGTTCTTGCAAACCAGCGCCAAGTCAGATCTTCCCAGGCTCGTTCTGACGTAGTTCAGTTGCTGCAGCTTGGCCACCAAGAGAGAGCCCTCTTTCGGGTGGAGCAAGTGATTAAGGACCAGAAACTGCTGGATGCGTATGCGATCATAGAGAGTTATTGTGAGGTTGTACTGGAAAGAATCAAGCTACTTGAACATGAGAGAGAATGTCCAGAAGAACTTAAGGAGGCAATTTCAGGTTTGATTTTTGCATCTTCTAGATGTGGGGATTTCCCAGAGCTTATAGAAATTCGTTCAGTAATTACCAGTCGTTTTGGGAAGGAGTTTACTGCTCGTGCTATTGAGTTACGCAACAATTGTGCTGTTGGTCCAATGATAGTACAGAAGCTGTCAGCTAGGCCACCAAGCTTGGAGATCAAATTGAAGTTACTTAAGCAAATTGCTTCTGAACATGGCATTACTTTGAAAGATTTGGAAGCTTATGAAGTTTCAACTGAGACGCAGGAGAAAGTTGTGGCAGAAGAGAAGAAGGATCAACCACAGCAGGAAACCAAAGTGGAAGGTGTTTTTCAGATTTTACCTGAAGAGATGGAGAAAGACAATCGGTATGCTGATTCGATGAGAGGAAGAAAGAAGTACAAAGATGTGGCAGACGCTGCTCAGGCAGCATTCGAGTCAGCAGCTTATGCAGCAGCTGCAGCAAGAGCTGCTGTGGAACTATCTCAATCTAAATCACTTGATCACGATGACCCGAGTAGTCTGAGTCCAAAACCAAGAAAATCCACTGAAACTCTTGAATCGAAGAACACTGAGATAGAATTTGAATCAGAAAACAAGGAAACACACAGTGGAAGTAGGTCTATAGGAGTGGAGGAGAGTGAAAATGGAACAGAATCGAAGCAGCCAGTGTCTTCTTCTAGTTCGGAAGCCAGGAATGCTAGTTTAAAGGAAAATGAGATTCCAATAGAAGCACTAATTGATCTTCTGGAGAAGGATTTGGTTTTGGACGAGAGTGATATTGATGCTGGGAATGGAGAAAGCAGCAGTTCAACTCTTGAGGAGAGGAATTCGAGCTTCGAGTGTCATGAGAAGATGGAATCAGAGTCTGCAGAGATCACAGCAAACAATGAGGAATCTGATAACAAAAATACTGCACAAAATTTAAGCATAGAGAATAAGGCTGTTATAAGGACAATAGATGTCCGTGGGCACTGA 5538 43.1 MANDTAHRKHRRSASDEDDEKSSKRHKHRHHRRHHRHRHSSNKNEEESCRDQEDSVAPVANRRSRPEDDVEEGEILEEEESGVRENESSMKEVDVEFGKFEDDEISGRIDQPAMECHEVDESSKANLIVKEGAGNSAQDWKISKVDSKFYNLDKEKGGYYAKIDTDKENMMLYQTDSGCKHGNDGSFSTGEVAGIKYNNLERCREGHSKGDFGHESLKLDERQHKRMLSPSKGGIKKISNNGNGKVATDGSTLGNGKRPQLERTEDKSQDFTPSTSQDRFIDASDCRSRSRSNCHSRGQSQSRETVEEEAESKSRHDHGWDHPIFDDKGKIHTDLDDDYTECARGEGRHRSRDMKDRGRSKMEVDRDWSKENEMGKNKDKDRGIDKQKYDDRERGRSKDRRKEMEQNRSRERETDRDRRRERERDAERDRRVKERGRSREREVQRHRRVERERGWSREREVERDRRMEKERGWSKEREVDRDRRAEKERCRSTDREGNRDRRREREKDRSKEKEVDWDGRRDRDRDRNDDKAEYSDRNRDKERVREMQKDRYRDKEFDRERQDDRNKNKSSDILTSKDKYGNLEHGYVKGSKQSRHYDNEFGLDGGRTNAVEKQGSFKRNNREEGEDKLMSDHDGEEEDGDSMSFQLADEEEEDLNRIKEESRRRRQAILEKYKCQQLEKQVEPSLKESEKGKDSAYDSSQSEAAAHAIPELVDGAVDDSVTDSSFAVEKSPQQNGVNATDKTAGTKGLGEGTPKAEGSDGLFCDDIFGETPAAVRKMGKGDGLQIERSGLHDNWDDADGYYNYRFGEVLDGRYEIAAAHGKGVFSTVVRAKDLKAGHGEPEEVAIKILRSNETMYKAGLEELVILKKLVGADPDDKRHCVRFLSSFKYRNHLCLVFESLHMNLREVLKKFGRNIGLKLTAVRAYAKQLFIALKHLRNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMFAGKNEITPYLVSRFYRAPEIILGLSYDHPMDIWSVGCCLYELSTGKVLFPGPSNNDMLRLHMELKGPFPKKMLRKGAFTDQHFDQDLNFHASEEDPVTKKTIKRIIVNIKPKDIGSIIRGSPGEDPKMLANFKDLLDKIFVLDPEKRMTVSQALNHPFITGNLLYDDLSFWHIYGMVEFRRGHIGQEWRVLSVECTVSIDVCFCSERTFQCLSELEALRRRIIFELLIVVSLKCCLASFMEALALERLTAVAPCEVVLQANCISSPFSWHFQLEMHEYGRMIGIEQSTQKPSAIHSKGTVILLLRIQKMRWVVRDLSVMNTIDEVLCFVAGESFYWVLTIIISHGLLVSVAVIPIIKNFRIFICNGSLKRKPKRLFFGAVHLAVMLPQEAISVKFIVSSEKVVENTMVTCLHTWICVYSKTASFPPRKEKLSEFPYQRFLRNMGKKLDALLGRSFKTTRFKALVNLAISRLAVLANQRQVRSSQARSDVVQLLQLGHQERALFRVEQVIKDQKLLDAYAIIESYCEVVLERIKLLEHERECPEELKEAISGLIFASSRCGDFPELIEIRSVITSRFGKEFTARAIELRNNCAVGPMIVQKLSARPPSLEIKLKLLKQIASEHGITLKDLEAYEVSTETQEKVVAEEKKDQPQQETKVEGVFQILPEEMEKDNRYADSMRGRKKYKDVADAAQAAFESAAYAAAAARAAVELSQSKSLDHDDPSSLSPKPRKSTETLESKNTEIEFESENKETHSGSRSIGVEESENGTESKQPVSSSSSEARNASLKENEIPIEALIDLLEKDLVLDESDIDAGNGESSSSTLEERNSSFECHEKMESESAEITANNEESDNKNTAQNLSIENKAVIRTIDVRGH 1845
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 36103855 36122451 + CePI673135_05g025070.1 Cec05g2507 204310

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g2507 1845 MobiDBLite consensus disorder prediction 1780 1845 - -
Cec05g2507 1845 FunFam Serine/threonine-protein kinase PRP4 homolog 874 1130 - -
Cec05g2507 1845 MobiDBLite consensus disorder prediction 234 258 - -
Cec05g2507 1845 MobiDBLite consensus disorder prediction 40 70 - -
Cec05g2507 1845 MobiDBLite consensus disorder prediction 1 24 - -
Cec05g2507 1845 MobiDBLite consensus disorder prediction 25 39 - -
Cec05g2507 1845 MobiDBLite consensus disorder prediction 1683 1759 - -
Cec05g2507 1845 PANTHER DUAL SPECIFICITY PROTEIN KINASE 409 1132 IPR050494 GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0018107(PANTHER)
Cec05g2507 1845 ProSitePatterns Serine/Threonine protein kinases active-site signature. 941 953 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec05g2507 1845 CDD STKc_PRP4 813 1129 IPR044092 GO:0004674(InterPro)|GO:0006468(InterPro)|GO:0045292(InterPro)
Cec05g2507 1845 ProSiteProfiles Protein kinase domain profile. 814 1129 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g2507 1845 MobiDBLite consensus disorder prediction 650 697 - -
Cec05g2507 1845 MobiDBLite consensus disorder prediction 1797 1812 - -
Cec05g2507 1845 MobiDBLite consensus disorder prediction 204 704 - -
Cec05g2507 1845 SMART serkin_6 814 1129 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g2507 1845 Pfam Regulator of Vps4 activity in the MVB pathway 1431 1594 IPR005061 GO:0015031(InterPro)
Cec05g2507 1845 MobiDBLite consensus disorder prediction 301 602 - -
Cec05g2507 1845 Coils Coil 1803 1823 - -
Cec05g2507 1845 FunFam serine/threonine-protein kinase PRP4 homolog 784 873 - -
Cec05g2507 1845 Gene3D Phosphorylase Kinase; domain 1 784 873 - -
Cec05g2507 1845 MobiDBLite consensus disorder prediction 1729 1755 - -
Cec05g2507 1845 MobiDBLite consensus disorder prediction 82 118 - -
Cec05g2507 1845 Gene3D - 1418 1604 IPR042277 -
Cec05g2507 1845 SUPERFAMILY Protein kinase-like (PK-like) 801 1139 IPR011009 -
Cec05g2507 1845 MobiDBLite consensus disorder prediction 727 757 - -
Cec05g2507 1845 MobiDBLite consensus disorder prediction 1 118 - -
Cec05g2507 1845 MobiDBLite consensus disorder prediction 727 742 - -
Cec05g2507 1845 MobiDBLite consensus disorder prediction 204 228 - -
Cec05g2507 1845 Gene3D Transferase(Phosphotransferase) domain 1 874 1130 - -
Cec05g2507 1845 MobiDBLite consensus disorder prediction 1683 1728 - -
Cec05g2507 1845 MobiDBLite consensus disorder prediction 1813 1834 - -
Cec05g2507 1845 Pfam Protein kinase domain 818 1129 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g2507 1845 MobiDBLite consensus disorder prediction 630 649 - -
Cec05g2507 1845 Coils Coil 648 668 - -
Cec05g2507 1845 FunFam Vacuolar protein sorting-associated protein IST1 1421 1603 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g2507 K08827 - - csv:101220260 1841.24
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0124 Cec-Chr2:1316823 Cec05g2507 Cec-Chr5:36103855 3.50E-13 dispersed
Cec05g2507 Cec-Chr5:36103855 Cec08g0547 Cec-Chr8:16137552 3.00E-67 dispersed
Cec01g0545 Cec-Chr1:5657560 Cec05g2507 Cec-Chr5:36103855 7.60E-38 transposed
Cec01g1814 Cec-Chr1:32572855 Cec05g2507 Cec-Chr5:36103855 2.90E-42 transposed
Cec03g0967 Cec-Chr3:15979050 Cec05g2507 Cec-Chr5:36103855 5.70E-20 transposed
Cec03g0968 Cec-Chr3:15998586 Cec05g2507 Cec-Chr5:36103855 2.00E-11 transposed
Cec03g1642 Cec-Chr3:34608932 Cec05g2507 Cec-Chr5:36103855 2.10E-37 transposed
Cec04g1780 Cec-Chr4:36702367 Cec05g2507 Cec-Chr5:36103855 5.40E-36 transposed
Cec05g1331 Cec-Chr5:13847556 Cec05g2507 Cec-Chr5:36103855 3.80E-58 transposed
Cec08g0303 Cec-Chr8:6633490 Cec05g2507 Cec-Chr5:36103855 1.10E-34 transposed
Cec11g0639 Cec-Chr11:7021477 Cec05g2507 Cec-Chr5:36103855 2.80E-42 transposed
Cec05g2507 Cec-Chr5:36103855 Cec08g0543 Cec-Chr8:16046638 9.20E-48 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g289 . . . . . Bpe10g00940 . Bma15g00084 . Cmo18g01044 . Cma18g01031 . Car18g00954 Sed06g1874 Cpe09g00289 Cpe01g01779 Bhi07g01341 Tan04g0880 Cmetu10g0761 Lac13g0479 Hepe01g1205 . . Cla05g02312 . Cec05g2507 Cco05g2549 Clacu05g2480 Cmu05g2341 Cre05g2458 Cone13ag0839 . . Cone9ag0468 Lsi04g00267 Csa05g02599 Chy10g01134 Cme10g00273 Blo06g00966 . . . Bpe11g01695 Bpe02g02080 . . . Cmo04g02140 . Cma04g02037 . Car04g01983 . . . . . . . . . . . . . . . . . . . Chy09g00604 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003313 0 1 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 2 1 1 1 10 7 1 50
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72038 PF00069 Pkinase 3.30E-46 CL0016 Cec PK