Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g2546 ATGTACAACAGTTATGTCAGCTCAACTGTATATTCCATTCGGAGTAAAGGGCCTCTTTCCCATTGCTTTAATGAGCGTCTCATCTCCTTAAATGAAAGATGGAATGGGAACGCATTGCATCTTCCATCATCGTCATCATCATGTTGTTCTTGTTGTGTTTGTTATACATTTCCAACCCACAGAGTGGCTGTAGGCCCTAGCATGTTCTATGGGCCGAGGCAATCCACCTTGCTTCAATGGTCGATCTCTAGGAGGTTGATGTTGGGTTGCCGAAACCGGTTCTGTTATACGCTTCCTGAATATGGGCGTGTTCTGGATTGTTATGAGGCTCCTTTTTCTATAAGTGATGGTAGGACTTGTCATTGCAGTGATGGAAGGAGATATAGAAGATGTTGTATGATTTCTGATAGTAATTGTGAATTTGACAAATCGGACGGATTTGATGAAGAGGACATTGCTGAGGCCATGATCAGTTTGATAAGGGAGGGTTTTGGAAGCCAGGAAAAAATTAAGTCATCCAAGAGAGTGGAAGTGGGAAACCAAAGAAAGTGTGGAGCGAAGGAGAGAAATTTGAGTTCATCTAGACGAGTAGAACTGGAGAAAAAGGTGAGAAGAGGTGTTGAGGAGAAAATTTTAAGTTCATTTGAAAAGATAAGAATAGACAGGGAAAGAGAGAGTAACAGTCAGCGAGAAAGAGAAGAGAGGAAAAGCAATAAGTTTGGTTGTTTAACTAGTAAACATAATAACAAAGTTGGATCAGTGGCAGTTGAGTTGAGGAAAGATGGATCTGGACTGAATGGTGATTGCCACTTGAGGAGGAACTCAGAGAATAAACTTAATGAAATGTCAACAACAGTAACATCCTCCATAAGTGGAACCTCTGATATGAACACAAGATTGTCAAGGGCCAGGGAGAGTGGTTATGTAAGTACTTCAAGTTCCAAGAAGAAGTTTGTTGACAAGAAAGAGGAATTGAAAATGGCCGTGACTTCGAATGAGCAATCAAAACAATATGATGTATCAGGTAAGAAAGTGGGTGGTGTGTTTATAAATGAAGGGAAAAAACTTGCAGAAGTATCAGAAATAAGCCACAGTGGTGCAGAAGAAATATCTCGTTCTCATAAAAGACTAACCATTAGGAATGAAAACCTAGAATTAGATGCAAATTTTATCAAGAAAGCAAGCAACAACAATCATGAAACTGGCCAGCCTGTCCTTAAAGAAAAAAGTTCAAGACGAAGTTCGTCATTTCAACAACTTATGTCAGAAAATAGGAAAGCTGAGAGAGAAAGGACCTCTCATCTGACAAGCCAGTCTGATGCAAATGAAAGTACAGGTCTCCATCTAACTTCTAATCAGGAGGTTGAAGAAAGACATCATCAAATAGGACATCATCCCACTGGAGAAGTGGAGTCGAGACAAAAGTTTCTTCATCTTGGTGTTATATCAGCAATCAAAGAGGGTAATACCAGCACCTATGTTTCAAGTTCTGAAATTAGAACACAAAATGAGGAACAAAATGCAGCATCAGTTAATGCATCAAATTTTGTGGCTGAAGACATAAAGTCTTTGACAGATCAGAAAGCTTCTCAGAGAGTTATGTCCAGAAAAGGTTCCCGAGATGCCTCTAACAGTTCAGTGGTTCATGGTACCGATAAAATATCTGCTACACATTCTGAAAAAACATTTGAAAATAGAATCTTCAAGCAAGAAACTGATAAATCATTAGTGGAAAGAACTGTCAAGAAAACCATAATAATACATGGTCAAAATAATGATCGTGTGCTGCAAACTGAATCGGGAAAAGTGGTTAAAAATCATGTAGAAAAACCAAAAGTTCAAGGATCCATTAATTTAAGTTCCCAAAGTAGTTTTCAAGGGATTGGTGTGAATAATAAAGAAAATAAAAGGTCACAGGCAGCGTTAATGCCTCCTCCATTTCAGCTTGTAGCTAGAGATCCACTACGAATAGATTCTACTAGTGAAACGGCAAGCCAAGTAGTTTCCAGAAGAACATCAGTAAGCAGTTCAGGTGCTTCCTACATGCAGTCGGGAGGAAGTCCAGCTTTGGACCGTAAATCCTACCGAGGAAGTGGGGCAGATGAGAGTGTCGAGGATTCTGTATACCTTATCACTCCTGATGATACTCTAGGTTCAGCTGACCGTTTAGAGAGATCATCTGCACAGTTTGTTGGTGAGTTCATGGAGAAGTCCAGGGATGAACTCTTAATTTCTGAAAACCGTAAGGAGAAAAACATCTCTGAGGTTGATTTACTACATGAAGAGAAGCAGGGAGAAAATAATTTGGTAGATTATCAAATGAAGGACCATGACTCAAGGCTCTCGTCTGGGAGTTCTGGAACCAAGGGTCCTTCTGATGAAATGTGGCATGTAATTGACTCAACTACTGAGCAGCCTTCCAAAACTGATGATCCTGAGATTACTGGACACAGTGAGAATGCAATTGTCAAGAGAAGTGGCAAATCCTTGTGGAACGTCATTTCAGACATAGTTCATCTCCGTTGGCATTCACGTGCTGAAACCTCTGAGTCAGCTTTAAGATCAGGTGGAAGAAATTCACCAAACGAGTCTGTTAGTAATGAAACATGGTTTTCCGGCCGTGAACATGAGGAGACTGATAATAAGAAAATGGAAAGAACCACAGTTTCTGAATTCACTTCTTCAGATCAGTTGGAAGAACCAAATCCTTCTGTCCAAGGCCAAGATTTATCTGATGATAAGAGAGCAGAAAGTAAATACTATGAAGTAGATACTCCATCTTCCCCAAATATAATAGAGACCAAGCCATCAGGTGGGACTATGTTAGTTTCTGGAGAAGCGATCTTAACAGATGGTAGGAAGGTTGACGTTATTTCTTCTGGTTTGGATATAGAACAGTCATCATTACCAGTCTCTACCCAAGGCATAAGAGGATCTTCCATTATCCAAGAAATGTCTCATAGTGGTAAAAGTAATGCCTTTGCAAGCAGCTCTGCAGATCAGTTGGGGCATTCTTCTGATGCTACATTATCAGAGATATCAACAACTGGAACCAAGGATGGGGAAGTGAAGCAAAGGAAGCTTCAAAGAAACAAGCAAGTTCTAAAAGATCGGTTTGATGAATGGGAAGAAGCATACCTACTAGAGACCGAGCAGCGAAAAATTGACGAAATGTTTATGAGGGAAGCCCTAGCTGAAGCCAAGAAGGCTGCTGATACTTGGGAAGTGCCTGTTGGAGCAGTGTTGGTGAAACATGGAAAAATTATTGCTCGTGGCTGCAACCTGGTTGAAGAGTTGCGAGATTCCACAGCCCATGCCGAAATGATTTGCATTCGGGAGGCTTCAAAGCAATTAAAGACATGGAGGCTTGCTGAGACAACTCTTTACGTGACACTTGAGCCTTGCCCGATGTGTGCTGGAGCGATACTTCAAGCACGAATCGAAAATCTTGTGTGGGGAGCACCAAATAAGCTTCTTGGAGCTGATGGCAGCTGGATCAGACTTTTCCCTGATGGTGGAGAGGGAAATGTCTCAGACCAGTCTGAGAAGCCTGCTGCACCCGTCCACCCGTTCCACCCGAAAATGAAAATCCGACGAGGTGTATTGGCATCGGAATGTGCTGATGTAATGCAACAATTCTTTCAGTTAAGGAGAAGAAAGAAGCAAAAGAAAGAAAACACTCCACCTCTAGCCATTACGCATCATCCATCAAAATTTATTACTAAGATGCATGACATTTTCCACATATTGTTCTGTTTGTAA 3762 41.02 MYNSYVSSTVYSIRSKGPLSHCFNERLISLNERWNGNALHLPSSSSSCCSCCVCYTFPTHRVAVGPSMFYGPRQSTLLQWSISRRLMLGCRNRFCYTLPEYGRVLDCYEAPFSISDGRTCHCSDGRRYRRCCMISDSNCEFDKSDGFDEEDIAEAMISLIREGFGSQEKIKSSKRVEVGNQRKCGAKERNLSSSRRVELEKKVRRGVEEKILSSFEKIRIDRERESNSQREREERKSNKFGCLTSKHNNKVGSVAVELRKDGSGLNGDCHLRRNSENKLNEMSTTVTSSISGTSDMNTRLSRARESGYVSTSSSKKKFVDKKEELKMAVTSNEQSKQYDVSGKKVGGVFINEGKKLAEVSEISHSGAEEISRSHKRLTIRNENLELDANFIKKASNNNHETGQPVLKEKSSRRSSSFQQLMSENRKAERERTSHLTSQSDANESTGLHLTSNQEVEERHHQIGHHPTGEVESRQKFLHLGVISAIKEGNTSTYVSSSEIRTQNEEQNAASVNASNFVAEDIKSLTDQKASQRVMSRKGSRDASNSSVVHGTDKISATHSEKTFENRIFKQETDKSLVERTVKKTIIIHGQNNDRVLQTESGKVVKNHVEKPKVQGSINLSSQSSFQGIGVNNKENKRSQAALMPPPFQLVARDPLRIDSTSETASQVVSRRTSVSSSGASYMQSGGSPALDRKSYRGSGADESVEDSVYLITPDDTLGSADRLERSSAQFVGEFMEKSRDELLISENRKEKNISEVDLLHEEKQGENNLVDYQMKDHDSRLSSGSSGTKGPSDEMWHVIDSTTEQPSKTDDPEITGHSENAIVKRSGKSLWNVISDIVHLRWHSRAETSESALRSGGRNSPNESVSNETWFSGREHEETDNKKMERTTVSEFTSSDQLEEPNPSVQGQDLSDDKRAESKYYEVDTPSSPNIIETKPSGGTMLVSGEAILTDGRKVDVISSGLDIEQSSLPVSTQGIRGSSIIQEMSHSGKSNAFASSSADQLGHSSDATLSEISTTGTKDGEVKQRKLQRNKQVLKDRFDEWEEAYLLETEQRKIDEMFMREALAEAKKAADTWEVPVGAVLVKHGKIIARGCNLVEELRDSTAHAEMICIREASKQLKTWRLAETTLYVTLEPCPMCAGAILQARIENLVWGAPNKLLGADGSWIRLFPDGGEGNVSDQSEKPAAPVHPFHPKMKIRRGVLASECADVMQQFFQLRRRKKQKKENTPPLAITHHPSKFITKMHDIFHILFCL 1253
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 36457502 36461873 - CePI673135_05g025460.1 Cec05g2546 204349

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g2546 1253 Hamap tRNA-specific adenosine deaminase [tadA]. 1060 1218 IPR028883 GO:0002100(InterPro)|GO:0008251(InterPro)
Cec05g2546 1253 MobiDBLite consensus disorder prediction 394 448 - -
Cec05g2546 1253 MobiDBLite consensus disorder prediction 222 244 - -
Cec05g2546 1253 CDD nucleoside_deaminase 1072 1167 - -
Cec05g2546 1253 MobiDBLite consensus disorder prediction 846 939 - -
Cec05g2546 1253 MobiDBLite consensus disorder prediction 802 821 - -
Cec05g2546 1253 MobiDBLite consensus disorder prediction 870 889 - -
Cec05g2546 1253 MobiDBLite consensus disorder prediction 658 707 - -
Cec05g2546 1253 MobiDBLite consensus disorder prediction 394 422 - -
Cec05g2546 1253 MobiDBLite consensus disorder prediction 923 937 - -
Cec05g2546 1253 Pfam MafB19-like deaminase 1057 1167 IPR028883 GO:0002100(InterPro)|GO:0008251(InterPro)
Cec05g2546 1253 Coils Coil 367 387 - -
Cec05g2546 1253 Gene3D Cytidine Deaminase, domain 2 1044 1230 - -
Cec05g2546 1253 MobiDBLite consensus disorder prediction 528 553 - -
Cec05g2546 1253 SUPERFAMILY Cytidine deaminase-like 1039 1220 IPR016193 GO:0003824(InterPro)
Cec05g2546 1253 MobiDBLite consensus disorder prediction 283 308 - -
Cec05g2546 1253 MobiDBLite consensus disorder prediction 658 684 - -
Cec05g2546 1253 Coils Coil 1025 1045 - -
Cec05g2546 1253 MobiDBLite consensus disorder prediction 890 909 - -
Cec05g2546 1253 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 1054 1176 IPR002125 -
Cec05g2546 1253 MobiDBLite consensus disorder prediction 222 241 - -
Cec05g2546 1253 MobiDBLite consensus disorder prediction 849 869 - -
Cec05g2546 1253 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 1034 1223 - GO:0009507(PANTHER)
Cec05g2546 1253 MobiDBLite consensus disorder prediction 804 818 - -
Cec05g2546 1253 FunFam tRNA-specific adenosine deaminase 1049 1229 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g2546 K11991 - - csv:101215576 1599.33
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g220 . . . . . . Bma14g01686 . . Cmo18g01080 . Cma18g01058 . Car18g00983 Sed08g1290 Cpe09g00259 . Bhi07g01388 Tan04g0923 Cmetu02g0302 Lac13g0441 Hepe10g1853 . . Cla05g02348 Cam05g2519 Cec05g2546 Cco05g2588 Clacu05g2514 Cmu05g2376 Cre05g2492 Cone13ag0870 Cone19ag0871 . . Lsi04g00307 Csa05g02561 Chy10g01101 Cme10g00309 . Blo11g00821 Bda07g01517 . Bpe11g01679 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010359 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 32