Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g2547 ATGCAGAAGAGAAGACCCTTTCAGAGCAGAAAAACAGTCGCCATTGGTGGTGAGCTTCTGAGAAAACTTGCCGAATTCGAAACAATCATGCCAGAAGAGAAGAAAATTTGGTGGTTGAAAGAATTAAAGCGCGGTTTCTTGAGAAGTGGAGAGAAAAATGCGAGAGATCGAGTCCAAGTCTTCCTATTTGATGGCTTTACGCCGAAACGCTTTGGCGGTATCTGGCATTTCTTGATAAAGTTGAAGGTTTCTGTTTCTGGGTTCTACTTTGCAAAAGAACTTTCAAAGATTCATATCATTTATTTGAGGATTCGATTTGGGTTGTTTAAGTTTCTTTTAGTTGTACCGTGTAAATTCGTGTTTGTGGGAACTTCAATCGGTGGAATTGAAAAAATGAGTCGCGGCAGAAGGAGAAAGCTGCATTTTAGCAAGATCTACTCGTTTGCATGTGGGAAAGCTTCTTTAAAGGATGATCATTCACAACTTGGGGGTCCGGGGTTTTCTCGAGTTGTTTTCTGTAACGAACCAGAATGTTTTGAGGCAGAAATTCGTAACTACATAGACAATCATATTAGTACAACCAAGTATACTCTAGCTACTTTCCTCCCTAAGTCTTTGTTTGAGCAATTCAGGAGGGTGGCCAATTTCTATTTTTTAGTCAGTGGGATCCTTGCTTTTACTCCTCTTGCTCCTTACACGGCTGTTAGCGCGATTATCCCTCTTATTCTTGTCATTTCAGCGACAATGATCAAAGAAGGGATTGAGGATTGGAGGCGGAAGAAACAGGATATTGAGGTTAACAATAGAAAGGTTAAAGTGCATCAAGGTGATGGAGTTTTTGCTTATACAGAGTGGAAGAATCTGAGAGTGGGTAATATTGTGAGAGTGGAGAAGGATGAATTCTTTCCAGCAGATATTATCTTGCTTTCATCCAGTTATGAGGATGCAATCTGCTATGTTGAGACAATGAACCTTGATGGTGAGACAAATTTGAAACTAAAACAAGCATTGGAGGTGACTTCACATATGCATGAGGATTCTATGTTCAACAGCTTTAAGGCTATCATAAAATGCGAGGATCCAAATGCAAATTTGTACAGTTTTGTTGGTAGTATGGAGTTGGAAGAGCAACAATATCCTCTATCTCCTCAACAACTACTCCTTCGAGACTCTAAACTCCGGAATACAGATTATATATATGGGGTGGTTGTCTTTACTGGTCGTGACACAAAGGTTATTCAAAATTCTACGGATCCACCTTCAAAGAGAAGCAAAGTTGAGAGGAAAATGGATAAGATTATATATATTTTGTTCTGTCTTCTATTTTTGCTTGCTCTTGTAGGATCTATATTTTTTGGCCTTGTGACTGACGAGGATTTGGAAAATGGAAGAATGAAGAGATGGTATCTCAGGCCTGATGATGCCAAAATTTTCTTTGATCCAAAAAGGGCTCCAATAGCTGCAATATTTCATTTTCTTACGGCACTGATGTTATATAATTACTTCATTCCAATCTCACTGTATGTATCAATAGAAATTGTCAAAGTTCTTCAGAGCATATTTATCAATCAAGATATTAATATGTATTATGAAGAAGCTGATAAACCTGCTCGTGCTCGCACCTCAAATTTGAATGAAGAACTTGGTCAAGTTGATACAATACTCTCTGACAAGACTGGAACTCTGACCTGTAATTCAATGGAGTTCATTAAGTGTTCTGTGGCAGGGAGGGCTTATGGACGGGGTTTCACAGAGGTAGAAAGGACTATAGGTAGACAAAAGGATTCACCCCTGCATGAAGCTGTAAATGGGGGGAATCACCATGAGGATGCCAATGATAAAACTTCACATATCAAGGGCTTTAATTTTAAGGATGATAGGATCATGAATGGGAACTGGGTTAACGAGCCTCATGCAAATGTAATTCAAATGTTTTTCCGTCTTCTTGCAACTTGTCATACGGCAATACCTGAAATCAATGAGGACACTGGAGAGGTTTCTTACGAGGCTGAATCTCCAGATGAAGCAGCATTTGTGATTGCAGCTAGAGAACTCGGCTTTGAATTCTACAAAAGAGCACAGACAAGCATATCACTGCACGAGTTTGATCCTTCCTTAGGCAAGAAAGTTGATAGGACATATAAACTGCTGCATGTTCTGGAGTTTAATAGCTCAAGAAAGCGGATGTCTGTCATAGTAAGAGATGAAGAGGATAAAATATTATTATTCTGTAAAGGTGCAGACAGTATCATGTTTGAAAGACTTGGAAAGAATGGAAGGGAGTTTGAAGAGGAGACCAAAGAACATGTCAATGAGTATGCTGATGCAGGATTGAGGACTTTGATACTTGCCTATCGTGAGCTTGAAGAGGAAGAATACAGAGAATTTGATGACAAGTTCACTAAGGCCAAAAGTTCAGTTAGTGCAGATCGAGAATCACTGATTGAGAAAGTAACTGACAACATTGAGAGGAATTTAATTCTTCTTGGTGCCACTGCTGTTGAGGACAAGCTTCAAAATGGGGTTCCTGAGTGCATTGACAGGCTTGCTCAGGCGGGAATTAAGATTTGGGTTTTGACCGGGGACAAAATGGAGACTGCCATTAATATTGGTTTTGCCTGTAGCTTACTAAGACAAGATATGAAGCAGATTGTTATTACCCTGGAGACATCAGAAATTAAGGCGCTAGAAAAGACAGGGGATAAGGCTTCTATCACCAAGGCATCAACGCAATGCGTCCTCGATCAAATTACTCGAGGGAGAGCTCAGATCACTTCACCAAATGGGTTATCTGAAGCATTTGCATTAATTATTGATGGGAAATCACTTTCTTATGCTTTAGAGGACAGTATGAAGGCATTGTTTCTTGAGGTAGCAACACATTGTGCTTCTGTTATTTGCTGCCGTTCATCTCCAAAACAGAAGGCACTGGTAACAAGGTTAGTTAAATCTGGAACACGGAAAACAACTTTAGCTATTGGCGATGGTGCCAATGATGTAGGGATGCTTCAAGAAGCGGACATTGGAGTCGGAATTAGTGGTGCGGAAGGAATGCAGGCCGTTATGTCAAGTGATGTTGCAATTGCACAGTTTAAATATTTAGAGCGCCTGCTTCTTGTGCATGGACATTGGTGCTACAGAAGGATATCATCAATGATTTGCTACTTTTTCTATAAGAATATTACTTTTGGTTTTACCATATTCCTATACGAAGCATTCACATCATTCTCTGGGCAACCTGTATATAATGATTGGTTTTTATCGCTTTACAATGTTTTCTTCTCGTCGCTTCCAGTGGTAGCTTTGGGAGTTTTTGATCAGGATGTATCTGCAAGACTCTGTCTCCAGTTTCCTCTCTTATACCAACAAGGGGTGCAGAATGTTCTTTTCAGCTGGCTCCGAATACTCAGTTGGATGTTTAATGGATTGTGCAGTGCTGTGATCATTTTCTTCCTTTGCACTAGAGCACTCGAGCATCAGGCATTCAACTCTGATGGGAAAACTGCAGGGCGGGATATTTTGGGTGCAACAATGTACTCTTGTGTTGTTTGGGTTGTGAACTTGCAAATGGCGCTCGCTGTTAGTTACTTCACCTTGATACAGCATCTTTTCATCTGGGGTTCGATTTCGATCTGGTACATTTTTCTCCTGATCTATGGGTCCATGACCCCCACCTTTTCAACCAATGCTTACCAGATTTTCATCGAAGTCCTTGCCCCTGGTCCTTTCTACTGGTTTGTGCTTCTGTTTGTGGTGATCACAACACTCATTCCTTACTTCTCCTACTCAGCTATACAGATGAGGTTCCTTCCCATGTATCATCAAATGATTTTATGGATTAGGAATGAAGGGCAACTAGACAACCAAGAGTACTGTGATATTTTCCGGAACACTTCCACTTTCCGATCAACGAGCGTGGGTTCCACTGCACGAAAGGGGAATGAACTCGATCTACGCAAATGTAAGGCCGAGAAAATCCGCGGCGGATTTGGCCATCACGGTGGTGAATTCGTTGAAGCTAATTACGCCGTCGCCGTCGGTATCGGCCTGTCGCATCATCTCGGAGAGTTCGCGGTAGGTCAGAGGATGGCCCATCTTCGCCATGGAACCAGCGAGCTCGGCAGCGGTGATGTAGCCATTGCCATCGCGATCGAAAGATCTGAAAACCTCCAACAACTGCTCTTGATTGACGAGAATATCGTCGTTCATGTCGGGGAGAATGGCATTGACGAGTTCATCGAATTCGATAGAGCCGTTGCCGTTGGAATCCATGTTGGAGAGGAGAGAATGGAGTTGGTCGCCGGAGGGTTTGATGCCGAGGGAGCGGAGAAGGGCGCCGAGCTCGAGCTGCGTGAGGCTGCCGTCGGAGTTCATGTCGAAACGCCTGAAAATGTCGTGCAGCTGCTTGAGCTGCGGGTCGGATTGAATGGAAGCCATGGATTTGGTTCTTCAGACGATTCGACAAGATCCGCAAGGAGGAGTTCGTCGAAGTTGGGGGATTTGGAAAATGGGGAGATTGGACATGCATACCCTCGAAAGTCTCTCTCAAATCGTAGTCTCTGTCGGAAAGTGGATGGTGGAAGTTGA 4587 42.38 MQKRRPFQSRKTVAIGGELLRKLAEFETIMPEEKKIWWLKELKRGFLRSGEKNARDRVQVFLFDGFTPKRFGGIWHFLIKLKVSVSGFYFAKELSKIHIIYLRIRFGLFKFLLVVPCKFVFVGTSIGGIEKMSRGRRRKLHFSKIYSFACGKASLKDDHSQLGGPGFSRVVFCNEPECFEAEIRNYIDNHISTTKYTLATFLPKSLFEQFRRVANFYFLVSGILAFTPLAPYTAVSAIIPLILVISATMIKEGIEDWRRKKQDIEVNNRKVKVHQGDGVFAYTEWKNLRVGNIVRVEKDEFFPADIILLSSSYEDAICYVETMNLDGETNLKLKQALEVTSHMHEDSMFNSFKAIIKCEDPNANLYSFVGSMELEEQQYPLSPQQLLLRDSKLRNTDYIYGVVVFTGRDTKVIQNSTDPPSKRSKVERKMDKIIYILFCLLFLLALVGSIFFGLVTDEDLENGRMKRWYLRPDDAKIFFDPKRAPIAAIFHFLTALMLYNYFIPISLYVSIEIVKVLQSIFINQDINMYYEEADKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGRAYGRGFTEVERTIGRQKDSPLHEAVNGGNHHEDANDKTSHIKGFNFKDDRIMNGNWVNEPHANVIQMFFRLLATCHTAIPEINEDTGEVSYEAESPDEAAFVIAARELGFEFYKRAQTSISLHEFDPSLGKKVDRTYKLLHVLEFNSSRKRMSVIVRDEEDKILLFCKGADSIMFERLGKNGREFEEETKEHVNEYADAGLRTLILAYRELEEEEYREFDDKFTKAKSSVSADRESLIEKVTDNIERNLILLGATAVEDKLQNGVPECIDRLAQAGIKIWVLTGDKMETAINIGFACSLLRQDMKQIVITLETSEIKALEKTGDKASITKASTQCVLDQITRGRAQITSPNGLSEAFALIIDGKSLSYALEDSMKALFLEVATHCASVICCRSSPKQKALVTRLVKSGTRKTTLAIGDGANDVGMLQEADIGVGISGAEGMQAVMSSDVAIAQFKYLERLLLVHGHWCYRRISSMICYFFYKNITFGFTIFLYEAFTSFSGQPVYNDWFLSLYNVFFSSLPVVALGVFDQDVSARLCLQFPLLYQQGVQNVLFSWLRILSWMFNGLCSAVIIFFLCTRALEHQAFNSDGKTAGRDILGATMYSCVVWVVNLQMALAVSYFTLIQHLFIWGSISIWYIFLLIYGSMTPTFSTNAYQIFIEVLAPGPFYWFVLLFVVITTLIPYFSYSAIQMRFLPMYHQMILWIRNEGQLDNQEYCDIFRNTSTFRSTSVGSTARKGNELDLRKCKAEKIRGGFGHHGGEFVEANYAVAVGIGLSHHLGEFAVGQRMAHLRHGTSELGSGDVAIAIAIERSENLQQLLLIDENIVVHVGENGIDEFIEFDRAVAVGIHVGEERMELVAGGFDAEGAEKGAELELREAAVGVHVETPENVVQLLELRVGLNGSHGFGSSDDSTRSARRSSSKLGDLENGEIGHAYPRKSLSNRSLCRKVDGGS 1528
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 36480150 36490890 + CePI673135_05g025470.1 Cec05g2547 204350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g2547 1528 MobiDBLite consensus disorder prediction 1480 1509 - -
Cec05g2547 1528 Pfam Cation transport ATPase (P-type) 651 755 - -
Cec05g2547 1528 Gene3D - 246 417 - -
Cec05g2547 1528 FunFam Phospholipid-transporting ATPase 671 829 - -
Cec05g2547 1528 FunFam Phospholipid-transporting ATPase 829 1033 - -
Cec05g2547 1528 CDD P-type_ATPase_APLT_Dnf-like 188 1153 - -
Cec05g2547 1528 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 160 1275 - GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER)
Cec05g2547 1528 ProSitePatterns E1-E2 ATPases phosphorylation site. 557 563 IPR018303 -
Cec05g2547 1528 PRINTS P-type cation-transporting ATPase superfamily signature 993 1012 - -
Cec05g2547 1528 PRINTS P-type cation-transporting ATPase superfamily signature 555 569 - -
Cec05g2547 1528 SFLD Haloacid Dehalogenase 539 1044 - -
Cec05g2547 1528 Pfam Phospholipid-translocating P-type ATPase C-terminal 1021 1271 IPR032630 -
Cec05g2547 1528 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 620 830 IPR023299 GO:0000166(InterPro)
Cec05g2547 1528 MobiDBLite consensus disorder prediction 596 615 - -
Cec05g2547 1528 Gene3D - 677 828 IPR023299 GO:0000166(InterPro)
Cec05g2547 1528 SUPERFAMILY Calcium ATPase, transduction domain A 270 414 IPR008250 -
Cec05g2547 1528 SUPERFAMILY Calcium ATPase, transmembrane domain M 184 1271 IPR023298 -
Cec05g2547 1528 Gene3D - 829 1033 IPR023214 -
Cec05g2547 1528 FunFam Phospholipid-transporting ATPase 247 417 - -
Cec05g2547 1528 Pfam Phospholipid-translocating ATPase N-terminal 171 237 IPR032631 -
Cec05g2547 1528 NCBIfam phospholipid-translocating P-type ATPase 186 1277 IPR006539 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro)
Cec05g2547 1528 NCBIfam HAD-IC family P-type ATPase 961 1075 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cec05g2547 1528 SFLD p-type atpase 539 1044 IPR044492 -
Cec05g2547 1528 SUPERFAMILY HAD-like 550 1048 IPR036412 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g2547 Cec-Chr5:36480150 Cec05g2714 Cec-Chr5:37662051 7.20E-256 dispersed
Cec06g0880 Cec-Chr6:11370136 Cec05g2547 Cec-Chr5:36480150 0.00E+00 transposed
Cec09g0074 Cec-Chr9:619213 Cec05g2547 Cec-Chr5:36480150 0.00E+00 transposed
Cec01g1685 Cec-Chr1:31468922 Cec05g2547 Cec-Chr5:36480150 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g2547 K01530 - csv:101207148 2211.42