Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g2567 ATGGGGTTATGGAGTACTGAAAGTGGTACATTATCTGAAATGGGGAATGTGGATGTAGTTAGGAACCAGGATATGGTTGGTTGTTCTTCTTCCACTGCTCCTGTGGTAGAGTCATTTAGCCCTACTATCTGGGAACAAGCAGCTAATTGTCAAAACTTGGGAATTTGCAACATTCAAGGCCATAACAACTCTACTACTTCAAATACCATAGCAATGAGTAAGGCCAGTGGCTGTCCAGTTTCTTTGAGCAGTGACATTGATAGAACACTTGACATCAGCTGGAACCTGTCACATAATATGTTAAAAGGGGGAGTTTACCTACCTAATTTTCCCAGTGTGATCCCGCCAAGCTTATCTCAACTGCCAGCTGATTCTTCATTTATTGAGCGTGCAGCCAGGTTTTCCTGCTTTAGTGGTGGAAATTTTGGTGATATTGTTGGCCATTTCAGCATTCCTGAGCCTATTGGTGTTTTTTCTAGAGGCATGGGAGTAATACCTGAGAGATGGGATGAGATTCCACGAAATGGGTTAGGTTCGGTATCCGGAACTGGAGGACAATCTCAAAGAAACATGGTTAACAGTGAATCTTCCAAGCCTCTTTCTTTGACTAATGAACATGGAGCTACTGAAAGGGGATCGCCTAAAAATGGAAGCCCTTTGAAATGGGATGATCGTGGTAAACATGCTGTTGATGGTTCTGCTAATGAATCTGATGAAGCTGAGTTTAGCGGTCATGATGGTTCGGGTGAGCCATGTACGTTAGAGGCCCCAGGTAAGGAACTTTCTGCCAAGGGCCTCGGCTCAAGGAAAAGGAAAAGAAGTGGACAGAAGACTGAACTTGATCAAGCCAATGGACCTCTGCAACAAACTACGGTTTCAGCTAAGGACGATGCTGAAACTCAGCGAAAAGGAGATCAAAATCCGAGTTCAACTGCAAACAAGTGTACAGGAAAACATAATCAACAGGTACCTCAACCTTCTGATCCACCAAAGGAAGAGTATATTCATGTTAGAGCTCGAAGAGGCCAGGCAACAAACAGCCACAGTCTTGCAGAGAGGGTAAGGAGGGAGAAGATCAGTGAGAGGATGAAGTTTCTTCAAGAACTAGTCCCTGGTTGCAGCAAGGTTACGGGAAAGGCGGTGATGCTAGATGAAATCATTAACTATGTCCAATCACTGCAGCGACAAGTCGAGTTTTTATCAATGAAACTCGCTACCGTGAATCCAAGGTTGGATATTAACATTGATGGACTCATAGCCAAAGATATTCTTCAATCACGAGTTGGTCCATCGTCGACATTGGGATTTTCTTCACATATGCCCATTGCTTGTCCCCCACCTCATATTTCTCATCATGGACATATCCCAAGCAATTTTCCTGCCATAGGGAGCTCTGAGATGTTAAGAAGCACAATGAATTCCCAGATGACTACAAGGTCTGGTGGATTTAAGGATCCTACTCAGATAAAGAATGTGTGGGATGGTGAACTCCAAAACATTGTGCAGATGAGCTTTGGGATGTCCACTACCCCCAATTGTTTAGAAATTGAAGGATCTGATTCACCAGGCAACACAAAAAAATTGCCCCGTGACAATTGCCCAGAAATCAGTGACCTGGTAGAGAAACTAGTTTCTAATCTCGTTAGTTCATATTATAGGAGAGTTGTTGCCTTAGTCGATGTACAGGGGTCGAGGAATCGATATCTGAAAACTGAGGAACCGCTTGAGGTTTAG 1734 43.71 MGLWSTESGTLSEMGNVDVVRNQDMVGCSSSTAPVVESFSPTIWEQAANCQNLGICNIQGHNNSTTSNTIAMSKASGCPVSLSSDIDRTLDISWNLSHNMLKGGVYLPNFPSVIPPSLSQLPADSSFIERAARFSCFSGGNFGDIVGHFSIPEPIGVFSRGMGVIPERWDEIPRNGLGSVSGTGGQSQRNMVNSESSKPLSLTNEHGATERGSPKNGSPLKWDDRGKHAVDGSANESDEAEFSGHDGSGEPCTLEAPGKELSAKGLGSRKRKRSGQKTELDQANGPLQQTTVSAKDDAETQRKGDQNPSSTANKCTGKHNQQVPQPSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDINIDGLIAKDILQSRVGPSSTLGFSSHMPIACPPPHISHHGHIPSNFPAIGSSEMLRSTMNSQMTTRSGGFKDPTQIKNVWDGELQNIVQMSFGMSTTPNCLEIEGSDSPGNTKKLPRDNCPEISDLVEKLVSNLVSSYYRRVVALVDVQGSRNRYLKTEEPLEV 577
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 36652382 36656000 + CePI673135_05g025670.1 Cec05g2567 204370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g2567 577 MobiDBLite consensus disorder prediction 175 331 - -
Cec05g2567 577 CDD bHLH_AtBPE_like 333 418 - -
Cec05g2567 577 MobiDBLite consensus disorder prediction 304 327 - -
Cec05g2567 577 MobiDBLite consensus disorder prediction 264 278 - -
Cec05g2567 577 Gene3D - 340 413 IPR036638 GO:0046983(InterPro)
Cec05g2567 577 MobiDBLite consensus disorder prediction 179 211 - -
Cec05g2567 577 Pfam Helix-loop-helix DNA-binding domain 346 394 IPR011598 GO:0046983(InterPro)
Cec05g2567 577 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 118 505 IPR024097 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(InterPro)
Cec05g2567 577 MobiDBLite consensus disorder prediction 217 245 - -
Cec05g2567 577 FunFam Basic helix-loop-helix transcription factor 340 412 - -
Cec05g2567 577 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 343 393 IPR011598 GO:0046983(InterPro)
Cec05g2567 577 MobiDBLite consensus disorder prediction 279 295 - -
Cec05g2567 577 SMART finulus 349 399 IPR011598 GO:0046983(InterPro)
Cec05g2567 577 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 341 411 IPR036638 GO:0046983(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0741 Cec-Chr1:8134303 Cec05g2567 Cec-Chr5:36652382 1.20E-104 dispersed
Cec05g2567 Cec-Chr5:36652382 Cec05g2888 Cec-Chr5:39026225 7.30E-44 dispersed
Cec05g2567 Cec-Chr5:36652382 Cec02g0524 Cec-Chr2:4933702 1.30E-37 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29664 PF00010 HLH 6.50E-06 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g2567 - - - 0.0