Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g2588 ATGGGGAAAACCGGGGCCAAGTTGCCAAGTTTCTGCCTGAACCGGATCCGGCCTCATGTTCGAGTTCCTATTCAATCCAAACCGGACTCTGTTTCTGTAAAAACCGGTCCGAACAAGAAGGCTGATGATTCCGTTGATGACATTCAAGTTGGAGCTAAGCCAGTTTTGGGAATTGGAAGGAAGATCATGATTGTGGTTGATTCCACCATTGAAGCTGAAGGAGCTCTTCATTGGGCTCTCTCTCACACTGTCCAAAATCAAGACAACATTCTTCTTCTTCATCTCACTAAGCCTTCAACGTCAAAAGGAGAAGGACTGAGTAAGGAGACAGCACCAAGAGCTTATGAATTGGTTCATTCCATGAGAACTTTATGCCAATTGAAGAGACCTGAGGTGGAAACGGAAGTTGCGGTGGTGGAAGGAGGGAAGGAGAAAGGGGCAGTGATAGTGGAAGAAGCGAGAAAGCGAGGGGTGTCGTTGCTGGTTTTGGGGCAGAAGAAACGGTCGACGACATGGCGGCTTCTGATGGTGTGGGCAGGCCACCGGTGGGGCAGCGGAGGCGGCGGTGGCGGTTTGGTGGAGTATTGTATACAAAATGCGAGCTGTATGGTGATTGCGGTGAGAAGGAAGAGCAAGAAATTGGGTGGTTATTTGATCACTACAAAGCGTCAAAAGGATTTCTGGCTTTTGGCTTAA 696 48.85 MGKTGAKLPSFCLNRIRPHVRVPIQSKPDSVSVKTGPNKKADDSVDDIQVGAKPVLGIGRKIMIVVDSTIEAEGALHWALSHTVQNQDNILLLHLTKPSTSKGEGLSKETAPRAYELVHSMRTLCQLKRPEVETEVAVVEGGKEKGAVIVEEARKRGVSLLVLGQKKRSTTWRLLMVWAGHRWGSGGGGGGLVEYCIQNASCMVIAVRRKSKKLGGYLITTKRQKDFWLLA 231
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 36772815 36773706 - CePI673135_05g025880.1 Cec05g2588 204391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g2588 231 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 60 211 - -
Cec05g2588 231 CDD USP_Like 61 207 - -
Cec05g2588 231 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 1 231 - -
Cec05g2588 231 Pfam Universal stress protein family 60 208 IPR006016 -
Cec05g2588 231 Gene3D HUPs 59 215 IPR014729 -
Cec05g2588 231 MobiDBLite consensus disorder prediction 25 45 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g2588 Cec-Chr5:36772815 Cec11g1621 Cec-Chr11:30493876 2.00E-21 dispersed
Cec01g1703 Cec-Chr1:31658091 Cec05g2588 Cec-Chr5:36772815 5.40E-43 wgd
Cec05g2588 Cec-Chr5:36772815 Cec06g1745 Cec-Chr6:30966767 1.50E-48 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g2588 - - - 0.0