Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g2593 ATGTCGTCCGCCGAGAAGGAAAGAGAGACGCAGGTCTACATGGCCAAGCTTGCAGAACAGGCCGAACGCTATGACGAAATGGTGGAGTGTATGAAGAAAGTTGCTAAACTAGACGTTGAGCTAACCGTGGAAGAGAGAAACTTGCTTTCTGTTGGATACAAAAATGTTATAGGTGCTAGACGAGCTTCTTGGCGCATCATGTCCTCGATTGAACAGAAGGAAGAGTCCAAAAGCAATGAGAATAATGTTAAACTTATTAAGAGTTACCGTCAGAAGGTCGAGGAAGAGCTTTCCAAGATCTGTACCGATATTCTGACTATTATTGACAAGCACCTCATCCCTTCTTCAACCTCTTCAGAAGCATCGGTTTTCTATTACAAGATGAAAGGTGACTATTACCGATATCTTGCTGAGTTCAAAACAGATCAAGAAAGAAAGGAGGCAGCTGACCAGTCATTGAAGGGATACGAGACTGCTTCGACCACCGCCAATACCGAACTTCCATCAACTCACCCTATCCGTCTTGGCCTTGCCCTCAACTTTTCTGTCTTCTACTATGAGATTATGAATTCCCCTGAAAGGGCTTGCCACTTGGCTAAACAAGCTTTTGACGAGGCAATTGCAGAGTTGGATACTTTGAGTGAGGAATCATACAAGGACAGTACCCTCATAATGCAGTTGCTGAGAGATAACCTCACTCTCTGGACATCTGATTTACCAGAAGATGGAGGTGAAGAGAACGTCAAAGGTGAGGATTCCAAACCGGCAGCACCAGCCCCCGAGCAGCATTAA 792 45.08 MSSAEKERETQVYMAKLAEQAERYDEMVECMKKVAKLDVELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKSNENNVKLIKSYRQKVEEELSKICTDILTIIDKHLIPSSTSSEASVFYYKMKGDYYRYLAEFKTDQERKEAADQSLKGYETASTTANTELPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEENVKGEDSKPAAPAPEQH 263
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 36814886 36817329 + CePI673135_05g025930.1 Cec05g2593 204396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g2593 263 Coils Coil 14 34 - -
Cec05g2593 263 Gene3D - 1 250 IPR036815 -
Cec05g2593 263 MobiDBLite consensus disorder prediction 237 263 - -
Cec05g2593 263 ProSitePatterns 14-3-3 proteins signature 1. 46 56 IPR023409 -
Cec05g2593 263 SMART 1433_4 8 250 IPR023410 -
Cec05g2593 263 ProSitePatterns 14-3-3 proteins signature 2. 218 237 IPR023409 -
Cec05g2593 263 PRINTS 14-3-3 protein zeta signature 209 238 IPR000308 -
Cec05g2593 263 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
Cec05g2593 263 PRINTS 14-3-3 protein zeta signature 155 181 IPR000308 -
Cec05g2593 263 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
Cec05g2593 263 PRINTS 14-3-3 protein zeta signature 182 208 IPR000308 -
Cec05g2593 263 PRINTS 14-3-3 protein zeta signature 120 142 IPR000308 -
Cec05g2593 263 Pfam 14-3-3 protein 14 236 IPR023410 -
Cec05g2593 263 MobiDBLite consensus disorder prediction 242 263 - -
Cec05g2593 263 PIRSF 14-3-3 2 248 IPR000308 -
Cec05g2593 263 PANTHER 14-3-3 PROTEIN 7 241 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Cec05g2593 263 FunFam 14-3-3 protein epsilon 3 249 - -
Cec05g2593 263 SUPERFAMILY 14-3-3 protein 7 238 IPR036815 -
Cec05g2593 263 Coils Coil 196 216 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g2593 Cec-Chr5:36814886 Cec08g1137 Cec-Chr8:23287433 1.50E-108 dispersed
Cec05g2593 Cec-Chr5:36814886 Cec08g1069 Cec-Chr8:22549304 4.00E-130 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g2593 K06630 - csv:101221275 485.723