Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g2595 ATGGCTTCGATCACAGCCGTAATTCAGTCTCCAATCCATCGGTTACCTTCCTTTCGATTGTCGTCTCCTAATAGAACAGTTCCCGCCAATTATTTCGTTCTTCAATGTCGATCACTTGCTTCTAATGCTTTGAACTCGCCGTTTTCACCGTTGACGGAGAATCGAACTGTTTCGCCATCGGTGGAACTATCTAGCAAGGCTATTGGGCTCTTAAGTTCTAGACAACCGTTAAAGTCTCGAAGTGTAGTTCGTCTGCCGGTGGTGAGGGCGGCTGCAGCTGAAGCCGACGGAGCTTCCGATGGGTTGAATAGCCCTTCGAAGAGCTTTGCTGCAAGATTTCCAGCACTCATTACTGGTTTCTACTTCTTTATGTGGTACTTTTTAAATGTTATCTTCAACATACTCAACAAAAAAGTTTATAATTATTTTCCATATCCATACTTTGTCTCTGTCATACATCTTCTTGTTGGAGCTGGATATTGTCTCATTTCTTGGGCTGTAGGTCTCCCAAAACGTGCCCCGATAGATAAGGAGCTCTTGCTATTATTGACTCCAGTTTCGCTATGTCATGCACTTGGACATGTGATGTCAAATGTTTCATTTGCAGCTGTTGCTGTGTCCTTCACTCACACCATTAAAGCTCTGGAGCCATTCTTTAATGCTGCTGCTTCTCAATTTGTTTTGGGACATCAAATTCCCTTCAGCTTGTGGCTTTCTCTAGCACCTGTTGTTTTAGGTGTGTCAATGGCATCACTAACGGAACTTTCCTTCAATTGGACTGGCTTTGTGAGTGCAATGATTTCAAACGTTGCATTTACCTATAGAAGTATCTATTCGAAGAAAGCAATGACAGGAATGGACAGCACAAACGTGTATGCATACACCACAATAATCGCTCTTTTGTTTTGCATTCCTCCTGCAGTTACGATTGAGGGACCGCAGTTGCTGCAGTATGGTTTTAAGGATGCCATTGCCAAAGTGGGTCTACAAAAGTTCCTGTCTGACCTTTTCTGGATCGGCATGTTTTATCATCTATACAATCAGCTTGCCGCTAATACTCTTGAACGTGTTGCACCATTAACACACGCTGTAGGAAACGTATTGAAGCGAGTTTTTGTGATTGGATTCTCCATTGTTGTTTTTGGCAATAAGATTTCAACTCAAACTGGAATTGGTACTGCTATAGCAATTGCCGGTGTCGCCATCTACTCCTTGATTAAAGCAAACTTGGAGGAACAAAAACGGAGGGCTGCTAAAATTCCATCATCATAG 1272 42.69 MASITAVIQSPIHRLPSFRLSSPNRTVPANYFVLQCRSLASNALNSPFSPLTENRTVSPSVELSSKAIGLLSSRQPLKSRSVVRLPVVRAAAAEADGASDGLNSPSKSFAARFPALITGFYFFMWYFLNVIFNILNKKVYNYFPYPYFVSVIHLLVGAGYCLISWAVGLPKRAPIDKELLLLLTPVSLCHALGHVMSNVSFAAVAVSFTHTIKALEPFFNAAASQFVLGHQIPFSLWLSLAPVVLGVSMASLTELSFNWTGFVSAMISNVAFTYRSIYSKKAMTGMDSTNVYAYTTIIALLFCIPPAVTIEGPQLLQYGFKDAIAKVGLQKFLSDLFWIGMFYHLYNQLAANTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAIAIAGVAIYSLIKANLEEQKRRAAKIPSS 423
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 36826736 36830596 + CePI673135_05g025950.1 Cec05g2595 204398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g2595 423 PANTHER SOLUTE CARRIER FAMILY 35 112 405 IPR050186 GO:0005794(PANTHER)|GO:0015297(PANTHER)
Cec05g2595 423 SUPERFAMILY Multidrug resistance efflux transporter EmrE 333 405 - -
Cec05g2595 423 Pfam Triose-phosphate Transporter family 118 404 IPR004853 -
Cec05g2595 423 SUPERFAMILY Multidrug resistance efflux transporter EmrE 155 253 - -
Cec05g2595 423 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 116 414 IPR004696 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g2033 Cec-Chr4:38445239 Cec05g2595 Cec-Chr5:36826736 2.40E-149 dispersed
Cec05g1631 Cec-Chr5:26008810 Cec05g2595 Cec-Chr5:36826736 4.10E-62 dispersed
Cec05g2595 Cec-Chr5:36826736 Cec10g0534 Cec-Chr10:6427648 2.60E-62 dispersed
Cec05g2595 Cec-Chr5:36826736 Cec04g1920 Cec-Chr4:37587002 3.20E-65 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g2595 K15283 - csv:101221040 692.96