Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g2614 ATGGCGCGGCGACTTTCATTCCCCGCGTTTTGTCTATGCCTTCTGTCTTTCTCTCTGTTGAACGATCCTATTCTCTGTAAAACCCTTAAACGTGATGTGAAAGCATTGAATGAGATCAAGGCTTCTCTTGGCTGGAGAGTGGTGTATTCTTGGGTTGGAGACGATCCGTGTGGCGATGGTGATCTGCCTCCTTGGTCTGGTGTCACTTGTACTACTCAAGGAGATTATAGAGTGGTTACTAAATTGGAAGTTTATGCGGTTTCGATCGTTGGCCCGTTTCCCACTGCTGTAACCAATCTCTTGGATCTTACTAGGCTTGATTTTCACAATAACAAGTTGACTGGACCAATTCCTCCTCAAATTGGACGGTTGAAGCGTCTCCAGATACTTAACTTGAGATGGAATAAGCTGCAAGATGTCATACCTCCTGAAATTGGTGAACTCAAGAGTTTAACTCATTTATATTTGAGCTTCAATAATTTCAAGGGAGAAATTCCGAGGGAGTTTGCTAGTCTTCCAGAGCTTCGCTACCTACACCTACAAGAAAATCGTTTCATTGGACGAATTCCTTCTGAATTGGGCACCCTGCAACATCTTCGCCATTTGGATGTTGGTAACAATCATTTGGTCGGCACCATTAGGGAACTCATACGCATTGATGGCTGCTTTCCATCTCTTCGCAACTTGTATCTTAATGATAATTATTTTACTGGAGGAGTTCCAGCTCAACTTGCAAACTTGACAAACTTGGAAATCTTGTATTTATCACACAACAAGATGTCCGGAATAATTCCTGCTGAATTAGCCCGCATGCCAAGACTTACTTATTTATTCTTGGACTACAACCAATTTAGTGGGAGAATCTCAGATGCTTTTTACAAACATCCATTATTGAAAGAGATGTTCATCGAGGGCAATGCTTTTAGGCAAGGTGTTAAGCCAATAGGCTTTCACAAAGTTCTTGAAGTTTCAGACACAGATTTCCTTTCTCAAGATTCTATCATCAAACTTAAAATGGCAACAATGGCCTCCAAAGTCTTGTTCCTCGTTCTAATTTGCTTCTTTTCATTTTCATCTTCCATTTTAGCAGAATTCGTTAAAGTTTCAGTGAAAGGAGTGACCACCATTGCTGAAACTGACAACTATTTCATTTGTGCTACTATAGATTGGTGGCCTTCTAATAAATGCGATTATGGCCAATGCCCATGGGGAAAAGCTGGCGTTCCTAATTTGGATCTTCAGAACGTTATCTTAACCAAAGCAATCAAGGAGTTCAATCCTTTGAGAATCCGAGTTGGAGGATCACTTCAAGATCAAATCATTTACAGAGTTGGAAACTCGGTGAAGAAGTGTCCTCAAATGAAGAAACAGAGTGATGGTTTGTTTGGATTCAGCAAAGGTTGTTTTACCATGGAAAGATGGGATGATTTTAATGAGCTATTCAACAAAACATCAGCTCGGGTTACGTTTGGTTTGAATGCTCTGATGGGTAAAACACCAGCCAAAGATGGAAGTATCAACTGGGTTGGTGATTGGGATCCTCGTAATGCTCGAGATTTCATTCGATACACTGCCTCTAAAGGATACAAAATCGATTCTTATGAACTGGGAAATGAGCTTTGTGCGAGCGGAGTTTCAGCAAGGCTTGAGCCAGATCAATATGGTAAAGATCTGACTCTAATGAGAAAAGTAGTTGAAGAGGTTTATCCTGATGCCAACAACAGACCCAAAATTCTTGGACCAGCGGGTTTCTTTGACAAAGAATGGTTCAAAACTTTCCTTCAAAACACTGCCCCAAATGTTGTGGATGGAGTCACTCACCATATTTACAATCTTGGAGCAGGTGTTGATCCTACTCTTATAAATAAGGTTCAAGACCCTTATGTTTTGGACCAAATTGCTCAAACTTTTAAGGAAGCTATGGAAGTTTCACAGAGCTTTGGGCCATGGTCTAAGCCTTGGGTTGGTGAATCTGGTGGTGCTTATAACAGTGGTGGCAAAACTGTTTCTCATACTTTTGCCAATGGATTCTGGTACTTGGATCAACTGGGGATGACTGCCACATTCAATCATCAGGTTTATTGCAGACAAGCCTTGATTGGTGGAAACTATGCTTTGCTTAATACCACTAGTTTCATCCCTAACCCTGATTATTATAGCGCTCTGCTATGGCACAGATTAATGGGAAAGAAGGTCCTCTCAGCATCCCACGACAGCTCTCCATACCTTCGTGTTTATTCTCACTGCACCAAAAACAACGAAGGCGTTACAGTGCTTCTAATCAACATGTCAAATTCGACCACGTTCGATGTAAATATTGTAAACGACAGAAATGTTTATCCAAACTTGATGATAGGCAGCAAATTAAAGGCAAGAGAAGAGTACCATTTAACTCCCAAAGACGGCAATATTCAAAGCGACGTCATGCTTTTGAATGGAACTCCTCTTCAACTTACTCCAACCTTGGACATTCCCGACATGTCGCCCAAGCTCGTCGATCCCACTTCCGCTGTGTCGGTTGCCCCTGATTCTTACGTTTTTGTCTCCATCAAAGACTTCAAAGCTCCTGCTTGCGCCTAA 2580 41.63 MARRLSFPAFCLCLLSFSLLNDPILCKTLKRDVKALNEIKASLGWRVVYSWVGDDPCGDGDLPPWSGVTCTTQGDYRVVTKLEVYAVSIVGPFPTAVTNLLDLTRLDFHNNKLTGPIPPQIGRLKRLQILNLRWNKLQDVIPPEIGELKSLTHLYLSFNNFKGEIPREFASLPELRYLHLQENRFIGRIPSELGTLQHLRHLDVGNNHLVGTIRELIRIDGCFPSLRNLYLNDNYFTGGVPAQLANLTNLEILYLSHNKMSGIIPAELARMPRLTYLFLDYNQFSGRISDAFYKHPLLKEMFIEGNAFRQGVKPIGFHKVLEVSDTDFLSQDSIIKLKMATMASKVLFLVLICFFSFSSSILAEFVKVSVKGVTTIAETDNYFICATIDWWPSNKCDYGQCPWGKAGVPNLDLQNVILTKAIKEFNPLRIRVGGSLQDQIIYRVGNSVKKCPQMKKQSDGLFGFSKGCFTMERWDDFNELFNKTSARVTFGLNALMGKTPAKDGSINWVGDWDPRNARDFIRYTASKGYKIDSYELGNELCASGVSARLEPDQYGKDLTLMRKVVEEVYPDANNRPKILGPAGFFDKEWFKTFLQNTAPNVVDGVTHHIYNLGAGVDPTLINKVQDPYVLDQIAQTFKEAMEVSQSFGPWSKPWVGESGGAYNSGGKTVSHTFANGFWYLDQLGMTATFNHQVYCRQALIGGNYALLNTTSFIPNPDYYSALLWHRLMGKKVLSASHDSSPYLRVYSHCTKNNEGVTVLLINMSNSTTFDVNIVNDRNVYPNLMIGSKLKAREEYHLTPKDGNIQSDVMLLNGTPLQLTPTLDIPDMSPKLVDPTSAVSVAPDSYVFVSIKDFKAPACA 859
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 36940426 36948315 + CePI673135_05g026140.1 Cec05g2614 204417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g2614 859 Pfam Leucine Rich Repeat 103 124 IPR001611 GO:0005515(InterPro)
Cec05g2614 859 Pfam Glycosyl hydrolase family 79, N-terminal domain 367 684 IPR005199 GO:0016020(InterPro)|GO:0016798(InterPro)
Cec05g2614 859 Gene3D Glycosidases 405 726 - -
Cec05g2614 859 Pfam Leucine rich repeat N-terminal domain 30 71 IPR013210 -
Cec05g2614 859 FunFam Leucine-rich repeat receptor protein kinase EMS1 222 314 - -
Cec05g2614 859 PANTHER HEPARANASE-RELATED 365 859 - GO:0004566(PANTHER)|GO:0009505(PANTHER)
Cec05g2614 859 FunFam Leucine-rich repeat (LRR) family protein 31 143 - -
Cec05g2614 859 Gene3D Ribonuclease Inhibitor 25 219 IPR032675 -
Cec05g2614 859 Gene3D Ribonuclease Inhibitor 220 329 IPR032675 -
Cec05g2614 859 FunFam heparanase-like protein 3 403 726 - -
Cec05g2614 859 Pfam Leucine rich repeat 126 185 IPR001611 GO:0005515(InterPro)
Cec05g2614 859 Pfam Leucine rich repeat 224 284 IPR001611 GO:0005515(InterPro)
Cec05g2614 859 SUPERFAMILY L domain-like 32 312 - -
Cec05g2614 859 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 144 221 - -
Cec05g2614 859 SUPERFAMILY (Trans)glycosidases 379 728 IPR017853 -
Cec05g2614 859 SMART LRR_typ_2 100 124 IPR003591 -
Cec05g2614 859 SMART LRR_typ_2 247 270 IPR003591 -
Cec05g2614 859 SMART LRR_typ_2 172 196 IPR003591 -
Cec05g2614 859 SMART LRR_typ_2 148 171 IPR003591 -
Cec05g2614 859 SMART LRR_typ_2 271 294 IPR003591 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g2614 Cec-Chr5:36940426 Cec11g0350 Cec-Chr11:3748161 7.10E-136 dispersed
Cec09g2319 Cec-Chr9:40077458 Cec05g2614 Cec-Chr5:36940426 4.20E-47 transposed
Cec01g1742 Cec-Chr1:32011863 Cec05g2614 Cec-Chr5:36940426 1.40E-161 wgd
Cec05g2614 Cec-Chr5:36940426 Cec06g1785 Cec-Chr6:31314897 4.70E-156 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g2614 K07964 - csv:101214214 929.472