Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g2623 ATGGGTGACGATGATGAACAGCCGCCGCCGCCGCCGCCGTCCAAATCTTTGAGACCCACTATTAATCTGCCCCCACGGACTTCTATGGAGTCACTCTTCAGCGGTGGGTCGGGTTTGGGATTTGGGCTTAGCCCAGGACCGATGACCCTCGTCTCGAGCTTCTTCTCTGATTCCGACGACTGCAAGTCTTTTTCTCAGCTCCTCGCCGGAGCTATGGCATCGCCGGTGCCTGCCGTTCCTCCGTCGGCGTCTGAGTTTAAGGCTTCTACCGGTCTGCTCGAATCTCCGGAGCTTTTCTCGCTTGGTCAAGGACCTTTCGGAATGACTCATCAGCAAGCTTTGGCTCAGGTTACTATGCAGGCTGCAGAAGCCTATTCTCATAATCAAATGCAAGCAGCATCTTTTTCTTCATCAGTAGCACCCTCTGCATCCTCCTCACAACTTTTGACATCCTTGCCGGTCGAGAAGACTAAAGATCAGCCGATGCAACCTCCCTTCCAGGACTCTGCAGTTGCATCCAAGGAGCCATCAGATAACTCTCAATCACAGCAGAGATTGCAATCTTCTTTGTGTAATGTTGATAGGCCTACTGATGATGGATACAATTGGAGAAAATATGGACAGAAACAAGTGAAGGGCAGTGAATTTCCTCGAAGCTACTACAAGTGCACGCACCCGAATTGTCCTGTCAAGAAAAAGGTTGAACGATCTCTGGAAGGACAAGTCACTGAAATCATCTACAAGGGTGAGCACAACCATAAACGACCTCAACCGAATAAGCGGGCAAAGGATGTCGGAAATTCTAATGGATATTTGAGTATTCATGGAAATCCTGAGCTATCTTCTCAAGTTCAGAGTGGATATTTGAATAAATTGAATGAGCAGACATCTGTGTCTTCCACTGGAAAGAAGGATCAAGAATTGAGTCATGTTACACACGAGCAGTTGTCGGGTACTAGTGATGGTGAGGGAGGGAGTGAGATAGAAACTGGAGTGAATCGAAAAGATGAAGATGAACCTGATGCCAAGAGACGGAACACTGAGGTTAGAATTTCTGAGCCAGCATCTTCTCATAGAATTCTCACAGAATCCAGAATCATTGTGCAGACTACAAGTGAAGTCGATTTATTAGATGATGGCTACAGGTGGCGTAAGTATGGGCAGAAAATTGTTAAAGGCAACCCTTACCCAAGGAGCTATTATAAATGCACAACTCCAGGATGCAATGTTCGTAAACATGTAGAGAGAGCTTCAACAGACCCGAAAGCTGTCATAACGACCTACGAAGGTAAACACAATCATGATGTTCCAGTTGGTAAAATCAGCAGCCACTGTTCAGTCAACAGTAACAATCCTCAACTAAAATCACAAAATATAGTTACTGAGAAAAAATTTTCAAGTAACAACACTGATCCTGGGAACTCTCGTCAACAGCCTGCTGGACTTTTACTGTTAAAGGAAGAACAAATAACATAG 1476 45.6 MGDDDEQPPPPPPSKSLRPTINLPPRTSMESLFSGGSGLGFGLSPGPMTLVSSFFSDSDDCKSFSQLLAGAMASPVPAVPPSASEFKASTGLLESPELFSLGQGPFGMTHQQALAQVTMQAAEAYSHNQMQAASFSSSVAPSASSSQLLTSLPVEKTKDQPMQPPFQDSAVASKEPSDNSQSQQRLQSSLCNVDRPTDDGYNWRKYGQKQVKGSEFPRSYYKCTHPNCPVKKKVERSLEGQVTEIIYKGEHNHKRPQPNKRAKDVGNSNGYLSIHGNPELSSQVQSGYLNKLNEQTSVSSTGKKDQELSHVTHEQLSGTSDGEGGSEIETGVNRKDEDEPDAKRRNTEVRISEPASSHRILTESRIIVQTTSEVDLLDDGYRWRKYGQKIVKGNPYPRSYYKCTTPGCNVRKHVERASTDPKAVITTYEGKHNHDVPVGKISSHCSVNSNNPQLKSQNIVTEKKFSSNNTDPGNSRQQPAGLLLLKEEQIT 491
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 37015293 37017924 + CePI673135_05g026230.1 Cec05g2623 204426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g2623 491 MobiDBLite consensus disorder prediction 295 357 - -
Cec05g2623 491 MobiDBLite consensus disorder prediction 248 279 - -
Cec05g2623 491 FunFam WRKY transcription factor 33 364 430 - -
Cec05g2623 491 Gene3D WRKY domain 362 438 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec05g2623 491 Gene3D WRKY domain 183 257 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec05g2623 491 MobiDBLite consensus disorder prediction 1 38 - -
Cec05g2623 491 FunFam WRKY transcription factor 181 257 - -
Cec05g2623 491 MobiDBLite consensus disorder prediction 312 326 - -
Cec05g2623 491 SMART WRKY_cls 197 255 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec05g2623 491 SMART WRKY_cls 377 436 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec05g2623 491 MobiDBLite consensus disorder prediction 154 208 - -
Cec05g2623 491 Pfam WRKY DNA -binding domain 378 435 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec05g2623 491 Pfam WRKY DNA -binding domain 198 254 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec05g2623 491 MobiDBLite consensus disorder prediction 262 279 - -
Cec05g2623 491 MobiDBLite consensus disorder prediction 1 19 - -
Cec05g2623 491 MobiDBLite consensus disorder prediction 154 195 - -
Cec05g2623 491 SUPERFAMILY WRKY DNA-binding domain 369 437 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec05g2623 491 MobiDBLite consensus disorder prediction 328 352 - -
Cec05g2623 491 MobiDBLite consensus disorder prediction 464 491 - -
Cec05g2623 491 SUPERFAMILY WRKY DNA-binding domain 196 256 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec05g2623 491 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 127 461 IPR044810 GO:0003700(InterPro)
Cec05g2623 491 ProSiteProfiles WRKY domain profile. 198 256 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec05g2623 491 ProSiteProfiles WRKY domain profile. 372 437 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cec05g2623 491 MobiDBLite consensus disorder prediction 20 34 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g2623 Cec-Chr5:37015293 Cec11g0476 Cec-Chr11:5119750 8.80E-115 dispersed
Cec02g0284 Cec-Chr2:2626157 Cec05g2623 Cec-Chr5:37015293 9.70E-57 transposed
Cec02g2013 Cec-Chr2:37960284 Cec05g2623 Cec-Chr5:37015293 3.10E-58 transposed
Cec03g0015 Cec-Chr3:179653 Cec05g2623 Cec-Chr5:37015293 3.70E-67 transposed
Cec03g1078 Cec-Chr3:22360113 Cec05g2623 Cec-Chr5:37015293 1.80E-64 transposed
Cec06g1425 Cec-Chr6:27788348 Cec05g2623 Cec-Chr5:37015293 6.10E-42 transposed
Cec10g0393 Cec-Chr10:4729290 Cec05g2623 Cec-Chr5:37015293 3.10E-74 transposed
Cec10g0454 Cec-Chr10:5399467 Cec05g2623 Cec-Chr5:37015293 5.90E-70 transposed
Cec10g2249 Cec-Chr10:36799289 Cec05g2623 Cec-Chr5:37015293 5.90E-65 transposed
Cec05g2623 Cec-Chr5:37015293 Cec08g1027 Cec-Chr8:22188316 2.50E-21 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29669 PF03106 WRKY 8.40E-26 CL0274 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g2623 - - - 0.0