Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g2690 ATGGAGGTAATCGCTGAAGATGGGAAAGTTGAGTCTCGGGAAGTGAGGGAATCGAAGGGGAAGAAGAAGCAGAAGAACAACAAGGAACAAGTTGAAACTGTGGAAGAGGTGACTGGTTGTTGGATTGCTCTGAGGATTTTTGGTAGCTGCATTTCTTCGAGATCCAAAGTTGATAGTTCGATAAGTGGGACTAGTATCAACTATGCTGAAAGCAAGTCTACGGCTGATTCAAGTAGAGACCAACCAACACCTAGAGACATATCTTCAACAAACACAAGTATGAGTAATGCAGAGAGTAATTCATCAACTTCCAAATTAGAAGAGGAACTTAAAATTTCTCCTCATCTACGGAAATTTTCATTCAATGATCTTAAGTTGGCTACAAGGAACTTCAGACCCGAGAGTCTTCTTGGTGAGGGTGGTTTTGGTTGTGTTTTTAAGGGTTGGGTTGAAGAAAATGGAACTGCTCCAGTTAAACCTGGCACAGGACTCACTGTTGCTGTTAAAACCCTCAACCATGATGGTCTTCAGGGCCACAAAGAATGGATGGCTGAAGTGAATTTTCTCAGTGATCTCAAACATCCCAACTTGGTCAGACTTATTGGTTACTGCAATGAAGATGATCAAAGACTGCTTGTATATGAGTTCATGCCTAGAGGAAGCCTGGAGAATCATCTTTTCCGGAGATCTCTACCCCTTCCGTGGTCTATTAGGATGAAAATTGCACTAGGTGCTGCCAAGGGTCTTGCTTTTCTTCATGAGGAAGCAAAAAGACCTGTGATATATCGTGATTTTAAAACATCCAACATTCTATTAGATGCTGAATACAATGCCAAGCTTTCTGATTTTGGACTTGCAAAAGATGGACCCGATGGAGATAAAACCCATGTCTCTACTCGTGTGATGGGAACATATGGCTATGCAGCTCCAGAATACGTTATGACTGGACATCTTACATCCAGGAGTGATGTTTACAGTTTTGGGGTGGTTCTTCTCGAAATGTTAACTGGCAGAAGATCCATGGATAAAAACCGTCCTAATGGTGAGCATAACCTTGTCGAATGGGCACGCCCATACCTAGGAGAGAAAAAGAGATTCTATCGCTTGATAGATCCTAGGCTTGAAGGTCATTTTTCAATAAAAGGTGCCCAAAAAGCAGTACAATTAGCTGCTCAATGCCTTAGCCGAGATCAAAAGGTCAGACCTTTGATGAGTGAAGTTGTTGAAGCCTTGAAGCCTCTCCCAAACCTCAAGGATATGGCAAGTTCATCTTATTATTTTCAGACAATGCAAGCTGACCGCATACGATCCAGCCCAATGGCGAGAAACGGCTACCACACAGTAGCTGGACCGGTTCCAAAGAACGGGCAGCAACTACGCAGCTATTCAGTCGCGAATGGTTCTCATGCTTCTCCATATCATCATCAGCAACCCCATCCATCTCCGAAACCCAATGTCAAAGCCTAA 1467 43.22 MEVIAEDGKVESREVRESKGKKKQKNNKEQVETVEEVTGCWIALRIFGSCISSRSKVDSSISGTSINYAESKSTADSSRDQPTPRDISSTNTSMSNAESNSSTSKLEEELKISPHLRKFSFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWMAEVNFLSDLKHPNLVRLIGYCNEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAKRPVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPDGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPYLGEKKRFYRLIDPRLEGHFSIKGAQKAVQLAAQCLSRDQKVRPLMSEVVEALKPLPNLKDMASSSYYFQTMQADRIRSSPMARNGYHTVAGPVPKNGQQLRSYSVANGSHASPYHHQQPHPSPKPNVKA 488
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 37472925 37476369 - CePI673135_05g026900.1 Cec05g2690 204493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g2690 488 Gene3D Transferase(Phosphotransferase) domain 1 217 433 - -
Cec05g2690 488 Gene3D Phosphorylase Kinase; domain 1 89 216 - -
Cec05g2690 488 MobiDBLite consensus disorder prediction 1 29 - -
Cec05g2690 488 SMART serkin_6 131 414 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g2690 488 SUPERFAMILY Protein kinase-like (PK-like) 107 411 IPR011009 -
Cec05g2690 488 ProSitePatterns Serine/Threonine protein kinases active-site signature. 260 272 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec05g2690 488 MobiDBLite consensus disorder prediction 69 103 - -
Cec05g2690 488 Pfam Protein tyrosine and serine/threonine kinase 135 411 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec05g2690 488 FunFam Probable serine/threonine-protein kinase PBL8 217 432 - -
Cec05g2690 488 CDD STKc_IRAK 137 414 - -
Cec05g2690 488 ProSitePatterns Protein kinases ATP-binding region signature. 137 169 IPR017441 GO:0005524(InterPro)
Cec05g2690 488 MobiDBLite consensus disorder prediction 467 488 - -
Cec05g2690 488 FunFam Serine/threonine-protein kinase BIK1 98 216 - -
Cec05g2690 488 ProSiteProfiles Protein kinase domain profile. 131 417 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g2690 488 PANTHER OS01G0588500 PROTEIN-RELATED 97 415 IPR050823 -
Cec05g2690 488 MobiDBLite consensus disorder prediction 69 107 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g0765 Cec-Chr4:27004753 Cec05g2690 Cec-Chr5:37472925 8.60E-56 dispersed
Cec05g2690 Cec-Chr5:37472925 Cec06g1311 Cec-Chr6:26359186 4.80E-137 dispersed
Cec05g2690 Cec-Chr5:37472925 Cec08g0922 Cec-Chr8:21060702 1.50E-114 wgd
Cec05g2690 Cec-Chr5:37472925 Cec09g1949 Cec-Chr9:36510395 2.10E-201 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72043 PF07714 PK_Tyr_Ser-Thr 1.20E-46 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g2690 - - - 0.0