Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec05g2724 | ATGGATTTGCTGCTTCACCTTCAGCTTCAACCGTGGCAGCTTCATCTCTTCCTTTTCTTCCTTTCTGTTTCCCCTGTTTGTTATTGCCAACTCAGTCCCCCTCAAAATATCGAAACCTTCTACCCTTCCCCATTTATTCCTCAACCACCGTCGCCAATTTCGCCGTCGTCTTCACTTGACCATCCGCCGTCGTCCACGTCAACCAAGACCATCGCCACGGCGGTGGCTGTCACTGCAGTGGGTGTGGCTCTGCTTTCCACGTTGTTCTTCTTCTTAATACAGAGATATGTGATCGGAAGAAAACGAAAAACAGAGGAGGCAAATTCAGGGACCGGTCCGGGTTTAGTCTCGCAGCCGGCGGTTGCTCAGAATGAATTTTCACGTGTTGATGGGAATCTTAAAGGGTTTATTGTGGATGAAAATGGGTTGGATGTGATTTATTGGAAGAGACTTGAAAGAAAGAAATCCAAGAATAGCTTTGATCGGAGTGACGGAGAAAGAAATGTTAAGGAAAATCGAAGCAAAAAGTCAGAGTCTGTTCAAGAAATTCCTCTGCTTCGAGGAAAATCTTCAACTTCACATGTTAAAATTGCACCGGAAGATGAAGAATACAGTCGGAATACATCTCCTCCGCCCCCTCCACCGCCCCAGATTAACAACCCTCCGCCATTTGCTGGGAATTCTGTTCAGTCAGTTGGAAAACCATCGAGTAGTTCAAATCTTTCATTAACAGCACCACCGCAACCGGCGGCAATTCCAGTACCTCCGTCACAATCTCTCATGGCTGTTCCCAACAATAAGAGCTCTGTTCCGCCACCGCCCCCACCGATTCCAGCAAAGACAAATTCAAGTCTGCCGCCGCCCCCACCTCCCATTCCTGCCAAGACCAATTCAAGACCGCCGCCACCACCTATTCAATCCAAGACCAATTCAGCAGCTCCACCTCCCCCTCCTATACCGGCCAAGGCAAATCCGGCAGCACCAGCGCCGCCACCGCCCAAGGCCGGCGGTTCAAAATTGCCCTTAAGGCATGCACCTCAAAAAGAGGGTAATAAATCCTCTAGAGAGGGTTCTTCATCAGCCGACAATGGTCAGGTTAAAATGAAGCCCCTGCATTGGGATAAAGTGAACACTGCAAATGCCGATCATTCCATGGTTTGGGACAAAATGAGCGCCGGTTCTTTCAAATTTGATGGGGATCTTATGGAAGCTCTGTTTGGATATGTCGCAACCAACCGGAAATCCCCACGGAGTGAAGCTAGTTCTACAGCAAACGCCGTTGGCCGAAACTCAGGGCCGTCGCAAACTTTCATTCTTGAACCGAAAAAATCTCAGAACATAGCCATTGTGGTCAAGTCCTTGACTATTCCTCGCAACGAAATCCTCGATGCGCTCAACGAAGGTCAAGGACTCGAAACAGAGATTCTTGAAAAACTCACAAGAATTGCTCTGACTCAAGAAGAAATTTCCCAAATTCTTGCTTACAAAGGAGACCCCCAGCAGCTTGCTGATGCTGAATCTTTCCTTTACCATCTTCTCAAATCGGTTCCATCTGCCTTTGCTCGTTTCAATGCCATGCTTTTCCGATCGAATTTCACTTCGGAGATTCTCCATCTCAAGGAATCTCTAGAAACTCTGGAGTCCGCCTGCAAGCAGCTTAGAACTCGAGGGCTGTTTTTAAAATTGCTTGAAGCAATTCTCAAAGCTGGGAATCGGCTAAATGCAGGAACTGCAAGAGGAAATGCCAGAGCTTTCAACCTTACAGCTCTTCGGAAGCTCTCTGATGTTCGAAGCACTGATGGGAAAACCACTTTGCTTCACTTTGTAGTGCAAGAAGTGATCAGGGCAGAAGGGAAAAAGTGTGTTTTAAACAAGAACAAGAGCTTGAGCCGTAATAGCAGCCATAGCAGTGCCAACAGCTTTAGCAGCTTCGAAAATTCGACTGCGAAGGAGGACAGAGTAAAGGAATATATGATGTTGGGACTGCCAGTTGTGGGAGGTCTAAGCGCTGAATTCTCTAATGTAAAGAAAGCAGCAGCGATCGACTTCGAGAGCTTCGTCAAGGCTGGGTCATCTCTGACTAGCCGAACCGCAGAAATCCGGCAGCTCTTAACTCAAATTGGGAACAACGAAGGTGGTTTTGCTAAAGAAATGAGAGGGTTTCTTGAGGCAGCAGAGAATGAGCTGAAGGTGGTGAGAGAAGAACAGACAAAAGTGATGGAGTTAGTGATGAAGACAACAGAGTATTATCAGGCAGGAAGTTCAAAAGATAAAGAAGCAAATCGGCTTCAATTATTCATCATAGTAAAAGATTTCCTAGAAATGGTAGATCGGGTTTGTGTTGAAATTACTCGAGATCTCCAGAGGAGGAGATCATCGGGAGTAAATGTGGGTTCGGGTTCATCACCGGTGAGATCGAAGGCCATCTTCCATAACTTGCCGGAAAATTTTATGTCAGACAAGTCCAGAGGCAGTTCTAGTGATACAGATGATGAATTCTGA | 2502 | 46.76 | MDLLLHLQLQPWQLHLFLFFLSVSPVCYCQLSPPQNIETFYPSPFIPQPPSPISPSSSLDHPPSSTSTKTIATAVAVTAVGVALLSTLFFFLIQRYVIGRKRKTEEANSGTGPGLVSQPAVAQNEFSRVDGNLKGFIVDENGLDVIYWKRLERKKSKNSFDRSDGERNVKENRSKKSESVQEIPLLRGKSSTSHVKIAPEDEEYSRNTSPPPPPPPQINNPPPFAGNSVQSVGKPSSSSNLSLTAPPQPAAIPVPPSQSLMAVPNNKSSVPPPPPPIPAKTNSSLPPPPPPIPAKTNSRPPPPPIQSKTNSAAPPPPPIPAKANPAAPAPPPPKAGGSKLPLRHAPQKEGNKSSREGSSSADNGQVKMKPLHWDKVNTANADHSMVWDKMSAGSFKFDGDLMEALFGYVATNRKSPRSEASSTANAVGRNSGPSQTFILEPKKSQNIAIVVKSLTIPRNEILDALNEGQGLETEILEKLTRIALTQEEISQILAYKGDPQQLADAESFLYHLLKSVPSAFARFNAMLFRSNFTSEILHLKESLETLESACKQLRTRGLFLKLLEAILKAGNRLNAGTARGNARAFNLTALRKLSDVRSTDGKTTLLHFVVQEVIRAEGKKCVLNKNKSLSRNSSHSSANSFSSFENSTAKEDRVKEYMMLGLPVVGGLSAEFSNVKKAAAIDFESFVKAGSSLTSRTAEIRQLLTQIGNNEGGFAKEMRGFLEAAENELKVVREEQTKVMELVMKTTEYYQAGSSKDKEANRLQLFIIVKDFLEMVDRVCVEITRDLQRRRSSGVNVGSGSSPVRSKAIFHNLPENFMSDKSRGSSSDTDDEF | 833 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 37755204 | 37757786 | - | CePI673135_05g027240.1 | Cec05g2724 | 204527 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec05g2724 | 833 | MobiDBLite | consensus disorder prediction | 223 | 246 | - | - | |
| Cec05g2724 | 833 | SMART | it6_source | 358 | 791 | IPR015425 | - | |
| Cec05g2724 | 833 | Pfam | Formin Homology 2 Domain | 361 | 776 | IPR015425 | - | |
| Cec05g2724 | 833 | MobiDBLite | consensus disorder prediction | 267 | 337 | - | - | |
| Cec05g2724 | 833 | MobiDBLite | consensus disorder prediction | 156 | 182 | - | - | |
| Cec05g2724 | 833 | MobiDBLite | consensus disorder prediction | 413 | 437 | - | - | |
| Cec05g2724 | 833 | Coils | Coil | 536 | 556 | - | - | |
| Cec05g2724 | 833 | Gene3D | Formin, FH2 domain | 378 | 794 | IPR042201 | - | |
| Cec05g2724 | 833 | Coils | Coil | 715 | 742 | - | - | |
| Cec05g2724 | 833 | MobiDBLite | consensus disorder prediction | 414 | 437 | - | - | |
| Cec05g2724 | 833 | MobiDBLite | consensus disorder prediction | 206 | 222 | - | - | |
| Cec05g2724 | 833 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 358 | 802 | IPR015425 | - | |
| Cec05g2724 | 833 | PANTHER | FORMIN-RELATED | 32 | 831 | IPR027643 | GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro) | |
| Cec05g2724 | 833 | MobiDBLite | consensus disorder prediction | 156 | 370 | - | - | |
| Cec05g2724 | 833 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 434 | 789 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cec05g2724 | Cec-Chr5:37755204 | Cec08g0918 | Cec-Chr8:21009271 | 2.50E-117 | dispersed | |
| Cec05g2724 | Cec-Chr5:37755204 | Cec05g1657 | Cec-Chr5:27272658 | 5.20E-83 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec05g2724 | K28090 | - | csv:101208197 | 1177.93 |