Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g2725 ATGGCCAGAAACTCCATCTTCTCCCGCCGCCGGAGGTCCGATCCGTTCGAGGGTTTAGATCGTTTCACCACCTCTGATTCCGAGGTTCATGTTCTCGCCGTCGATGACAACCTCGTCGACCGTACAGTAATTGAACGTCTCCTCCGCCTCACTGCCTGTCGAGTTACTGCAGTGGATAGTGGAATTAGAGCTTTACAATATCTCGGATTGCAAGAGGAGACTAGTTCCCAAGTTGGTTTTGATAGCTTGAAGGTCGATATGATCATAACCGACTACTGTATGCCCGGAATGACAGGATATGAATTGCTAAAGAAAATTAAGGAATCATCAACTCTGAGAGAGATTCCGGTGGTGATTATGTCGTCGGAGAACGTGGTGGCGAGGATAGACAGGTGTTTGGAGGAAGGGGCAGAGGATTTCATAGTGAAGCCGGTGAAATTAGCAGATGTGAAACGGCTCAGGGAATATATGGTGGGGGACGAAAAGACTGGAAGTGAAAGAAGTGGGATCAACAAAAGGAAGCTACGAGAGCCGTGTGATCAACCTTCGTCATCGCCGTCCATTTCATCGCCAGCATCATCGGATTCCTCTCCATCATGTCCATCATCTTCATCACCGTCAGATTCGCTTCAATCAACCCCATCATCGTCAGAGCCGTCTTCTCCGACGTCTACTCCTCAATCCGACGGCTCTAAATGA 699 48.93 MARNSIFSRRRRSDPFEGLDRFTTSDSEVHVLAVDDNLVDRTVIERLLRLTACRVTAVDSGIRALQYLGLQEETSSQVGFDSLKVDMIITDYCMPGMTGYELLKKIKESSTLREIPVVIMSSENVVARIDRCLEEGAEDFIVKPVKLADVKRLREYMVGDEKTGSERSGINKRKLREPCDQPSSSPSISSPASSDSSPSCPSSSSPSDSLQSTPSSSEPSSPTSTPQSDGSK 232
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 37768331 37769313 - CePI673135_05g027250.1 Cec05g2725 204528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g2725 232 MobiDBLite consensus disorder prediction 180 232 - -
Cec05g2725 232 Pfam Response regulator receiver domain 31 150 IPR001789 GO:0000160(InterPro)
Cec05g2725 232 Gene3D - 29 187 - -
Cec05g2725 232 SUPERFAMILY CheY-like 29 154 IPR011006 -
Cec05g2725 232 PANTHER TWO-COMPONENT RESPONSE REGULATOR 26 218 IPR045279 GO:0009736(InterPro)
Cec05g2725 232 MobiDBLite consensus disorder prediction 161 232 - -
Cec05g2725 232 CDD REC_typeA_ARR 31 153 - -
Cec05g2725 232 MobiDBLite consensus disorder prediction 161 179 - -
Cec05g2725 232 SMART REC_2 29 154 IPR001789 GO:0000160(InterPro)
Cec05g2725 232 ProSiteProfiles Response regulatory domain profile. 30 158 IPR001789 GO:0000160(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g2725 Cec-Chr5:37768331 Cec05g2913 Cec-Chr5:39237960 5.40E-38 dispersed
Cec01g0759 Cec-Chr1:8308253 Cec05g2725 Cec-Chr5:37768331 4.30E-39 transposed
Cec10g1628 Cec-Chr10:30724162 Cec05g2725 Cec-Chr5:37768331 1.60E-39 transposed
Cec05g2725 Cec-Chr5:37768331 Cec06g1863 Cec-Chr6:31985770 2.00E-48 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29685 PF00072 Response_reg 1.20E-21 CL0304 Cec TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g2725 K14492 - csv:101209506 339.732