Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g2734 ATGTCCGTATCGATTTCCAACTGCTTCTCTAATTTACTCTGTCAAGAAGATTCTTCCGGCGTCTTCTCCGGCGAGACGCCGGGGTGTTCTTCCGACCTTGATTCTCCGGCTTGCGTCGAGGAATCTATTTCCGTCTTCATCAAGAATGAGCGTCACTTCGTCCCCGATTACGACTGTTTGTCGCGCTACCAATCTCCGTCGCTTGATGCGGCCGCTAGATTAGACTCTATTGCATGGATTCTTAAGGTTCAAGCGTATTACGGTTTTCAGCCGTTAACAGCGTATCTCTCCGTCAACTACTTGGATCGCTTCCTTAGTTCACGCCGTTTGCCGCAAACAAATGGGTGGCCATTCCAACTCCTCTCTGTTGCTTGTCTCTCACTCGCTGCTAAAATGGAGGAACCTCTTGTTCCCGCATTACTGGATCTTCAGGTTGAAGGGGCTAAATATATATTTGAACCCAGAACGATATGCAGGATGGAATTATTGGTGCTGAGGGTATTGGATTGGCGGCTGCGTTCAGTAACACCCTTCAATTTCATAGCATTCTTTGCTTGCAAGCTCGACCCATCTGGAGATTTCATTGGATTTCTTATCTCAAGAGCAACAGAAATTATACTGTCGCATATCCGAGAGGTAATATTTCTGGAGTACTGGCCATCGTGTATTGCGGCGGCCGCGTTGCTTTGTGCAGCAAATGAAGTCCCGAATTTGTCTGTTGTCAATCCAGAACATGCTGAATCATGGTGCAGTGGTCTAAGGAAAGAAAATATCATCGGCTGCTACCGGTTAATGGAAGAGATTGTGCTTGATAATAGCCGGAGAAACTCCCCCAAAATCATACCTCAGTTTAGAGTGACAGTTCGCACTAGAATGAGATCCAGCGATTTATCTTCCACCTTCTCTTCCTCTTCCTCATCTTCGTCATCACCAAACAAAAGGAGAAAATTAAACCAGACCCATCTCTGGGTAGATGATGAGAAAGATTCCCAATGGGAGGGGAAACTAAAGGGAAAGAGGGGTTTGTTTGATTTTGAGGGAAATGGCAGAGCGTTGAATAAGTGGAGTCCATATGGATATCATAGTGTTAAATGTACTATTATGAGAATGGGCTCTCCCTCAAACCAGCTGGCTGGCCCCTCCGATCAGCTAAACTCCGGTGACCTCCTGCCGTGGCTGCTTTCATCTTAG 1191 46.43 MSVSISNCFSNLLCQEDSSGVFSGETPGCSSDLDSPACVEESISVFIKNERHFVPDYDCLSRYQSPSLDAAARLDSIAWILKVQAYYGFQPLTAYLSVNYLDRFLSSRRLPQTNGWPFQLLSVACLSLAAKMEEPLVPALLDLQVEGAKYIFEPRTICRMELLVLRVLDWRLRSVTPFNFIAFFACKLDPSGDFIGFLISRATEIILSHIREVIFLEYWPSCIAAAALLCAANEVPNLSVVNPEHAESWCSGLRKENIIGCYRLMEEIVLDNSRRNSPKIIPQFRVTVRTRMRSSDLSSTFSSSSSSSSSPNKRRKLNQTHLWVDDEKDSQWEGKLKGKRGLFDFEGNGRALNKWSPYGYHSVKCTIMRMGSPSNQLAGPSDQLNSGDLLPWLLSS 396
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 37842827 37846415 + CePI673135_05g027340.1 Cec05g2734 204537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g2734 396 CDD CYCLIN_AtCycD-like_rpt1 72 170 - -
Cec05g2734 396 FunFam D2/4-type cyclin 56 173 - -
Cec05g2734 396 SUPERFAMILY Cyclin-like 157 274 IPR036915 -
Cec05g2734 396 SUPERFAMILY Cyclin-like 34 172 IPR036915 -
Cec05g2734 396 SMART cyclin_7 78 166 IPR013763 -
Cec05g2734 396 MobiDBLite consensus disorder prediction 297 317 - -
Cec05g2734 396 PANTHER CYCLINS 37 268 IPR039361 GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER)
Cec05g2734 396 Pfam Cyclin, N-terminal domain 43 173 IPR006671 -
Cec05g2734 396 Gene3D - 56 173 - -
Cec05g2734 396 Gene3D - 46 236 - -
Cec05g2734 396 Pfam Cyclin, C-terminal domain 175 285 IPR004367 -
Cec05g2734 396 ProSitePatterns Cyclins signature. 73 104 IPR048258 -
Cec05g2734 396 CDD CYCLIN_AtCycD-like_rpt2 175 265 - -
Cec05g2734 396 MobiDBLite consensus disorder prediction 297 320 - -
Cec05g2734 396 SMART Cyclin_C_2 175 311 IPR004367 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g2278 Cec-Chr5:34146285 Cec05g2734 Cec-Chr5:37842827 4.70E-37 dispersed
Cec05g2734 Cec-Chr5:37842827 Cec09g2170 Cec-Chr9:38626386 5.80E-125 dispersed
Cec05g2734 Cec-Chr5:37842827 Cec08g1180 Cec-Chr8:23697968 1.00E-44 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g2734 K18810 - csv:101209417 588.571