Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g2747 ATGGCATCAAGATCCCCCACAAACTTTTTGGACCTGGCTTCTGGAGATTTACTGGATGTCCCCCGTACACCCAGGTCCCTGCCACGGGTAATGACTGTTCCTGGAATTATTTCTGAATTGGATGATTATGGAAGTAATGACGGAGATTCGGAGTCTTCATCTGTGTACCGTGAGAGGAAAATCATAGTTGCGAATATGTTGCCCTTGCACGCTAAAAAAGATGGGGAATCTGGCAAATGGTGCTTCAGTTTAGATGAGGATTCAATTTTATTGCAGCTAAAGAATGGGTTTTCGCCTGAGATGGAGGTTATATACATTGGTTCCCTCAAGGTTGAAATCGACGCCAGCGAACAGGAAGAGGTTGCTCAGAAGCTGTTCGACAATTTTAATTTTGTACCTACATTTCTTCCTTCTGATCTCCAGAAAAACTTTTATCTTGGGTTTTGCAAACAGCAGCTTTGGCCCTTATTCCATTACATGCTACCCATGTGCCCAGAGCACGGTGATCGCTTCGATCGGCAGCTTTGGCAAGCCTATGTTTCTGCGAATAAAATGTTTGCCGACAAGGTGATGGAAATCATCAATCCTGAGGAAGATTCTATTTGGGTTCATGATTATCATTTAATGGTTCTTCCAACGTTCCTGAGGAAGCGCTACAATCGAGTTAAACTTGGATTTTTTCTGCATAGCCCGTTTCCATCATCAGAAATCTATCGAACTTTACCAGTCCGGGATGAGATTCTCCGTGGCCTGTTAAACTGTGATTTACTTGGTTTTCATACGTTTGATTATGCACGTCACTTCCTCTCATGCTGCAGCAGAATGTTGGGCTTGGACTATGAATCTAAGCGGGGACATATTGGACTGGATTATTATGGTCGCACGGTATATATCAAAATTCTGCCCGTAGGAATTCACATGGGTCGGCTGGAATCAGTGATGAATCTTCCATCTACATTTGCTAAAGTCAAAGAAATTCGAGATCAGTTCATGGGGAAGAAACTAATTCTTGGTATTGATGACATGGACATTTTTAAGGGTATAAGCCTGAAGCTTCTCGCTGTGGAACAGCTTTTACGGCAACATCATGAGTTGCGGGGCAAAATAGTCCTGGTTCAAATAGTGAACCCTGCAAGGGGTTCAGGAAAAGATGTACATGAAGCTCAGAAGGAAACCTATTTGGCTGCTGAAAGGATCAATCAAGCTTACGGTTCAAATAACTACAAACCAGTAATTCTGATTGATCGCCCAGTTCCACGTTTTGAGAAGACTGCTTATTATGCTTTAGCAGAATGCTGCATAGTGAGTGCTGTAAGGGATGGCATGAATTTGGTTCCATACAAGTATATTGTCTGCAGGCAAGGAACTCCTCTTATGGATGAGGCTATGGGCTTACAAATTGGTTCTCCGCGGACGAGTATGCTTGTAGTGTCTGAGTTTATTGGTTGCTCGCCCTCTTTAAGTGGAGCAATCAGGGTTAACCCTTGGGACATTGAAGCTGTTGCCGATGCCTTGGAACTAGCCATAACAATGCCGGAGTCAGAGAAGCAGCTGCGGCATGAAAAACATTATCGATATGTCAGTTCCCACGATATAGGATATTGGTCTCGTAGTTTTATGCAAGATTTAGACAGAGCATGTCAAGATCACTATAGTAAACGGTGCTGGGGGATTGGCCTGGGTCTGCGTTTTAGAGTTGTTTCTCTTTCTCCTGGGTTTAGGAAGTTAACTATTGATCACATTGTCTCAGCTTATAAAAGAACTCATAGAAGAGCGATATTTTTGGATTACGATGGCACTATCATTTCACAAAGCTCTATAATTAAGACACCAAGCCCTGAAGTTATCTCTGTCTTGAGTACGCTTTGCAATGACCCCTGTAACACTGTGTTCATTGTTAGTGGGAGGGGGAGAAGTTCTTTAGGTCAGTGGTTTGCGTCTTGTGAGATGTTGGGGATTGCAGCAGAACATGGGTACTTCATTAGGTGGGGTGGAACTTCAGAATGGGAAACCAGTCCATTGTCTTCTGATCTGGATTGGATTAAAATTGTAGAGCCAGTGATGAGATTATATACAGAAGCAACAGATGGCTCGTGCATAGAACCCAAAGAGAGTGCTTTAGTCTGGCATCATCAAGATGCTGATTCTGACTTCGGATCCTGTCAAGCCAAGGAATTGCTGGACCATCTAGAAAATGTACTTGCCAACGAACCGGCCGTTGTTAAAAGGGGCCAACATATTGTTGAAGTGAAGCCACAGGGAGTAAGCAAAGGGTTGGTCGCAGAAAAGGTTCTCTCGAGAATGGTAGATAGTGGAAGACCACCTGATTTCGTGATGTGCATTGGAGATGATCGATCAGATGAAGATATGTTTGAGAGCATATTAAGCACTGTCTCCAGTCCCTCACTGCCTTCCGCTCCAGAAATTTTTGCCTGTACTGTTGGGCGAAAGCCAAGCAAGGCCAAGTTTTACCTTGATGATACTTCCGACGTCGTGAAATTGCTGCAATGCCTTGCCTCTTCGTCACGTCCAAGACCTCGGCAACTACCACAGATGCGTGTTTCTTTTGAGAGTGTTTTTTGA 2583 43.79 MASRSPTNFLDLASGDLLDVPRTPRSLPRVMTVPGIISELDDYGSNDGDSESSSVYRERKIIVANMLPLHAKKDGESGKWCFSLDEDSILLQLKNGFSPEMEVIYIGSLKVEIDASEQEEVAQKLFDNFNFVPTFLPSDLQKNFYLGFCKQQLWPLFHYMLPMCPEHGDRFDRQLWQAYVSANKMFADKVMEIINPEEDSIWVHDYHLMVLPTFLRKRYNRVKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLLGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYYGRTVYIKILPVGIHMGRLESVMNLPSTFAKVKEIRDQFMGKKLILGIDDMDIFKGISLKLLAVEQLLRQHHELRGKIVLVQIVNPARGSGKDVHEAQKETYLAAERINQAYGSNNYKPVILIDRPVPRFEKTAYYALAECCIVSAVRDGMNLVPYKYIVCRQGTPLMDEAMGLQIGSPRTSMLVVSEFIGCSPSLSGAIRVNPWDIEAVADALELAITMPESEKQLRHEKHYRYVSSHDIGYWSRSFMQDLDRACQDHYSKRCWGIGLGLRFRVVSLSPGFRKLTIDHIVSAYKRTHRRAIFLDYDGTIISQSSIIKTPSPEVISVLSTLCNDPCNTVFIVSGRGRSSLGQWFASCEMLGIAAEHGYFIRWGGTSEWETSPLSSDLDWIKIVEPVMRLYTEATDGSCIEPKESALVWHHQDADSDFGSCQAKELLDHLENVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLSRMVDSGRPPDFVMCIGDDRSDEDMFESILSTVSSPSLPSAPEIFACTVGRKPSKAKFYLDDTSDVVKLLQCLASSSRPRPRQLPQMRVSFESVF 860
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 37948522 37951267 - CePI673135_05g027470.1 Cec05g2747 204550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g2747 860 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 720 851 - -
Cec05g2747 860 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 52 311 - -
Cec05g2747 860 FunFam Alpha,alpha-trehalose-phosphate synthase 313 528 - -
Cec05g2747 860 Gene3D - 720 848 IPR023214 -
Cec05g2747 860 Gene3D - 590 709 IPR023214 -
Cec05g2747 860 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 590 707 - -
Cec05g2747 860 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 24 840 IPR001830 GO:0003824(InterPro)|GO:0004805(PANTHER)|GO:0005829(PANTHER)|GO:0005992(PANTHER)|GO:0005992(InterPro)|GO:0070413(PANTHER)
Cec05g2747 860 NCBIfam HAD-IIB family hydrolase 592 793 IPR006379 -
Cec05g2747 860 NCBIfam trehalose-phosphatase 589 839 IPR003337 GO:0005992(InterPro)
Cec05g2747 860 CDD HAD_TPP 592 833 - -
Cec05g2747 860 SUPERFAMILY HAD-like 591 839 IPR036412 -
Cec05g2747 860 Gene3D Glycogen Phosphorylase B; 52 311 - -
Cec05g2747 860 Gene3D Glycogen Phosphorylase B; 312 528 - -
Cec05g2747 860 Pfam Trehalose-phosphatase 594 829 IPR003337 GO:0005992(InterPro)
Cec05g2747 860 CDD GT20_TPS 59 543 IPR001830 GO:0003824(InterPro)|GO:0005992(InterPro)
Cec05g2747 860 Pfam Glycosyltransferase family 20 59 544 IPR001830 GO:0003824(InterPro)|GO:0005992(InterPro)
Cec05g2747 860 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 59 548 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g2098 Cec-Chr4:38935903 Cec05g2747 Cec-Chr5:37948522 0.00E+00 dispersed
Cec05g2747 Cec-Chr5:37948522 Cec10g0149 Cec-Chr10:1447625 0.00E+00 dispersed
Cec05g2747 Cec-Chr5:37948522 Cec06g1886 Cec-Chr6:32150692 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g2747 K16055 - csv:101212688 1703.72