Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g2748 ATGGATCTGGAAAGTGGAGTTGTTAGTGAAAAGAATGCGAAGAAGGATTCATGGAAGACGGTTTTGATGATGGCTTATCAGAGTCTTGGGGTTGTTTATGGGGAGTTGGGCACTTCGCCTTTATATGTCTATAAGAACACTTTTGCAGAAGAAGATATCAATCACACCAAGAGCAACGATGAGATTTATGGGGTTTTGTCCTTTGTTTTCTGGACTCTGACCATTGTTCCTTTGCTCAAGTACATATTTATCGTTCTTAAAGCTGATGATAATGGGGAGGGAGGGACATTTGCTCTGTATTCGTTACTGTGTCGACATGCCCGAGTTAGCTCATTGCCCAATACCCAGTTGGCTGATTCTGAACTCACCGAGTACAAGATGAATGTCCTTGGTCCACCATCTCAACAAAGTTTTGGATTCAAACTCAAATCAGCACTAGAAAAGCGTCGTGTTCTGCAAAAATTCTTGCTCGTTCTTGCTTTAATTGGGACTTGTATGGTGATAGGGGATGGCATCTTAACACCGGCTATTTCTGTTCTTTCGGCGGTTTCTGGCCTCGAACATACCATGGCAAAAGAGCATCACCAATATACAGTAATCCCAATTGCATGTGTCGTACTGATATGCTTGTTTGCGCTTCAACACTACGGCACTCACAGGATCGGCTTCTTGTTTGCTCCCATAGTGATAGTTTGGCTAGTGTGTATTAGTGCCATTGGCCTGTACAATATTATTCACTGGAATCCGGGTGTTTATAGAGCAATTTCTCCTCGTTACATGTTCCAGTTTCTTAAGAAAACACAAAAAGGAGGTTGGATGTCACTTGGTGGAATAATGTTGTGCATTACTGGTTCAGAGGCGATGTTTGCTGACCTTGGGCATTTTTCTCAGTTGTCAATTAAGATTGCTTTCACTTTTATGGTTTATCCGTCTCTCCTCCTAGCATACATGGGGCAAGCTGCCTATCTGTCCCAACATCATCCTCCAAATGATCATTCAATTGGGTTTTATGTATCTGTTCCTGATAAATTGAAGTGGCCTGTCCTTATAATTGCTGTGCTTGCTGCAGTAGTAGGAAGCCAGGCTATAATCACCGGAACTTTCTCGATTATAAAGCAGTGCTCTGCTTTGGGTTGCTTTCCTCGAGTTAAAATTATTCATACGTCCTCAAAAGTTCACGGTCAGATCTATATCCCAGAGGTCAATTGGATTTTGATGCTGTTGTGCTTGGCTGTTACCTTAGGTTTCAGAGACACAAAGCGCCTGGGCCATGCCTCAGGTTTGGCAGTGATAACTGTGATGCTTGTTACTACATGCTTGATGTCGCTTGTTATCGTCCTGTGCTGGCACCGAAGTGTATTTCTTGCAATAGGCTTCATCTTCTTTTTTGGCACCATTGAATCTCTCTACTTCTCAGCTTCTCTTATAAAATTTCTTGAAGGAGCTTGGGTTCCCATCGCAATTTCTCTTGTGTTCCTGATCGTTATGTATGTCTGGCACTATGGTACTCTGAAGAAGTTTGAATTCGACATCCAAAACAAGGTTTCTATTAACTGGCTACTTAGTTTTGGTCGCAACTTAGGCATTGTAAGAGTCCGTGGGATTGGCGTCATACAAACGGAGCTTGTTTCGGGTATCCCGGGTATCTTCACCCACTTTGTCACCAATATTCCCGCCTTCCATCAAGTTCTTGTTTTCCTTTGCATCAAATATGTCCCAGTGCCACATGTTAGACCAGAGGAACGGTTTCTAATTGGTCGTATTGATACGAGTGAATACAGACTCTACCGGTGCATTGTGCGATATGGGTATCGAGATGTTCACAAAGACGATGTAGAGTTCGAGAATGATCTTATATGCAGCATAGCAGAGTTTATAAGGTCAGGGACTGCAGTGTCCAGTGATTCTAAACCGGACTTTGATAAAGATGGTGAAAAGATGTCAGTCGTCGGGACATCTTCTACCCATGAAGATAGGATGCAGTTGGCTGAGACCGATAATGAAGAAGACTCTGAAGAACTGTACCAAGCTTCAGATACAAGGGAAATAAGGTCACCAGCTCCAGTTCAATTGAGAAAAAGAGTACGCTTCATTGTACCCGAGAGCCCAGAAATCAACACTGATGCAATGGAAGAATTACAAGAGCTAAGGGAAGCAAGAGAAGGAGGAGTAGCTTACATATTAGGACGGTCGCACATGAAAGCAAAACAAGGATCGAGCATGCTGAAAAGGGTGTCGATCGACTTCATTTACGAGTTCTTAAGGAAGAACTGCAGAGAAGCCGACTTCCCAGTAGGTTTATCACATTCATCATCAACCCTAGAGGTGGGTATGATGTATCTTGTTTAA 2349 42.91 MDLESGVVSEKNAKKDSWKTVLMMAYQSLGVVYGELGTSPLYVYKNTFAEEDINHTKSNDEIYGVLSFVFWTLTIVPLLKYIFIVLKADDNGEGGTFALYSLLCRHARVSSLPNTQLADSELTEYKMNVLGPPSQQSFGFKLKSALEKRRVLQKFLLVLALIGTCMVIGDGILTPAISVLSAVSGLEHTMAKEHHQYTVIPIACVVLICLFALQHYGTHRIGFLFAPIVIVWLVCISAIGLYNIIHWNPGVYRAISPRYMFQFLKKTQKGGWMSLGGIMLCITGSEAMFADLGHFSQLSIKIAFTFMVYPSLLLAYMGQAAYLSQHHPPNDHSIGFYVSVPDKLKWPVLIIAVLAAVVGSQAIITGTFSIIKQCSALGCFPRVKIIHTSSKVHGQIYIPEVNWILMLLCLAVTLGFRDTKRLGHASGLAVITVMLVTTCLMSLVIVLCWHRSVFLAIGFIFFFGTIESLYFSASLIKFLEGAWVPIAISLVFLIVMYVWHYGTLKKFEFDIQNKVSINWLLSFGRNLGIVRVRGIGVIQTELVSGIPGIFTHFVTNIPAFHQVLVFLCIKYVPVPHVRPEERFLIGRIDTSEYRLYRCIVRYGYRDVHKDDVEFENDLICSIAEFIRSGTAVSSDSKPDFDKDGEKMSVVGTSSTHEDRMQLAETDNEEDSEELYQASDTREIRSPAPVQLRKRVRFIVPESPEINTDAMEELQELREAREGGVAYILGRSHMKAKQGSSMLKRVSIDFIYEFLRKNCREADFPVGLSHSSSTLEVGMMYLV 782
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 37965163 37970077 - CePI673135_05g027480.1 Cec05g2748 204551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g2748 782 Pfam K+ potassium transporter integral membrane domain 25 521 IPR053951 -
Cec05g2748 782 Pfam K+ potassium transporter C-terminal domain 534 778 IPR053952 -
Cec05g2748 782 MobiDBLite consensus disorder prediction 632 677 - -
Cec05g2748 782 NCBIfam potassium uptake protein 24 780 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cec05g2748 782 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 13 781 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(InterPro)|GO:0016020(PANTHER)|GO:0071805(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g2748 Cec-Chr5:37965163 Cec09g2001 Cec-Chr9:37017380 1.6e-312 dispersed
Cec05g2748 Cec-Chr5:37965163 Cec10g1456 Cec-Chr10:28900416 0.00E+00 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g2748 K03549 - csv:101212925 1495.33