Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec05g2763 | ATGTCTTCTTCAAACGATACTTCTTCTCCTTCGTCGGATTCTATTTCAGATTCAAGTTTGCCGCCTGAAGCTTTGGATTCTTCTTCTTCTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTACTCCCTCTTCTCCTCCACCCTCACCTCAGACAGATGGTTTTTCATCGATGATATTGAATCATGATGATGGTCTTCTGCCGTCGACTCTTTCATCCGCAACTAAAGCTCCACCTATCGACGACCTAGTTTCACCATCTTCCTCACCTCCAGCTCCTCCAGATCCTGGAACTACACCGCCGGCCCCTACTGGCGACTCCGATTCAAATGCATCTGGCGACAATCCCTCGCCACCGCCTGAAGATTCTGCTTCGCCACCGCCGTCTCCTCAGCCGCGGCCTCATCCACCACCGCCTTCACCACCGCCTCCACAACAGCCGTCTATGGTTGGCGTCGTTAATCCTCCACCTACCCCTGTTCCGACTACAAAAGCATCTCCGACACCTCCAGGAAGCCCACCTTCTCCAATATCTGAGGATGAACCCTTTGTCCCGGTGGATCAGAGCGCCGTTCAGACTCCTAATACAGACAAGGAGCCTCCACCATCTGAACCAACGGATGCCCTTCCTCCATCAGAAAATCCAGTCACGATTCCTTCACCAGCTGCAAACCCGGCGACGGGGAAACGAACTCCGAGTCCACCTCAAGGAATTGCTACTCCCACATCAGAGTCTAACATTCTTTCACCTCCCACAACCACATTCACATCCACATCCACATCCACTCGCACTCCGAACAACTCACCTCATTTCGCCGACTCAACGCCAGTGAAATCACCATTAGGGCAGTCCAATGCACCGTCGTCTGGTTCAAGTAGTCAAACTGATGTTGCAGTAGGCGCTGCAGTCGCTGGAGTTTTCGTAATCGTTTTGGTTGCTGTGGTTTTTATGTTCACAAGGAAGAAGAAAAGACGGAGAGAGATGTATACGGGCCCCTACATGCCTCCTAATAATTTTGGTGTGAAATCAGATGGAAATTACTATCCACATCAACATGGGGGTAACTCTGGTTCTACTGAAGGCTTCTATACTCAGGTCCCACATACTCCCGTTGGAAATAGCTTTGGGAGTCAAAGAGGAACAGGATACAGTGGCAGTGGAACAGAGTCAGGTGTGATAAACAGTGCCAAGTTCTTCTTTAGCTATGAAGAATTGATGGAGATTACGTCTGGATTTTCGCGTCAAAACATTCTTGGGGAAGGTGGGTTTGGATGTGTTTACCAGGGTTGGCTTCCAGAAGGGAAGTCGGTGGCTGTGAAGCAACTCAAGGCAGGAAGTGGACAGGGGGAGAGGGAATTCAAGGCAGAAGTTGAGATTATCAGTCGTGTTCATCATCGACATTTGGTGTCTTTAGTGGGCTATTGCGTCTCTGAGCATCATAGATTGCTCATCTATGAGTTTGTTCCTAATAAGACTCTTGAGCATCATCTCCATAGCGGTAATGGAGTGCCTGTGTTGGATTGGTCCAAAAGACTCAAAATCGCTTTAGGAGCTGCAAAGGGTTTGGCATATCTTCATGAAGATTGTCATCCCAGAATTATCCACCGAGACATCAAGTCAGCCAACATTTTGCTGGATGACGCTTTTGAGGCGCAGGTCGCAGATTTTGGACTTGCGAAACTGACAAATGATACACACACCCACGTTTCCACTCGTGTCATGGGGACATTTGGATACATGGCACCCGAGTACGCATCAAGTGGGAAATTGACAGACAGATCAGATGTATTCTCGTTTGGGGTTGTGCTTCTTGAGCTTATTACTGGTCGTAAGCCTGTTGATCCAACTCAGCCCCTGGGGGATGAGAGTTTGGTTGAATGGGCTCGTCCACACCTCCTGCACGCCCTTGAAACCGGGGAGTTTGACGGATTGATAGATCCACGCCTTGGAAAACAGTATGTGGAAAGTGAAATGTTCAGAATGATCGAAGCAGCAGCTGCCTGTGTTCGTCATTCCGCTCCCAAAAGGCCTCGCATGGTTCAGGTGGTGAGAGCACTAGACATTGAAAGTGACATGTCTGACCTCTCCAATGGTGTTAAATATGGCCAAAGCACCATCTATGATTCTGGACAATACAATCAAGACATTTCTAAATTCAGAAGAATGGCACTCGGTTCAGACAGCTTTGAATACAATATTTACAGTAGCGAATACAATTCCAGAGAAATGACTGCAAGTCGTGAATCATGGAGATTCAACACTAACTCAAGTGGTGAATCAGAAACTCAAGCTTTTAAAGGACGAACTGGGGCACAACAAAGTCACCATAGTGGTCGACAATTCTAA | 2343 | 48.23 | MSSSNDTSSPSSDSISDSSLPPEALDSSSSSPPPPPPPPPTPSSPPPSPQTDGFSSMILNHDDGLLPSTLSSATKAPPIDDLVSPSSSPPAPPDPGTTPPAPTGDSDSNASGDNPSPPPEDSASPPPSPQPRPHPPPPSPPPPQQPSMVGVVNPPPTPVPTTKASPTPPGSPPSPISEDEPFVPVDQSAVQTPNTDKEPPPSEPTDALPPSENPVTIPSPAANPATGKRTPSPPQGIATPTSESNILSPPTTTFTSTSTSTRTPNNSPHFADSTPVKSPLGQSNAPSSGSSSQTDVAVGAAVAGVFVIVLVAVVFMFTRKKKRRREMYTGPYMPPNNFGVKSDGNYYPHQHGGNSGSTEGFYTQVPHTPVGNSFGSQRGTGYSGSGTESGVINSAKFFFSYEELMEITSGFSRQNILGEGGFGCVYQGWLPEGKSVAVKQLKAGSGQGEREFKAEVEIISRVHHRHLVSLVGYCVSEHHRLLIYEFVPNKTLEHHLHSGNGVPVLDWSKRLKIALGAAKGLAYLHEDCHPRIIHRDIKSANILLDDAFEAQVADFGLAKLTNDTHTHVSTRVMGTFGYMAPEYASSGKLTDRSDVFSFGVVLLELITGRKPVDPTQPLGDESLVEWARPHLLHALETGEFDGLIDPRLGKQYVESEMFRMIEAAAACVRHSAPKRPRMVQVVRALDIESDMSDLSNGVKYGQSTIYDSGQYNQDISKFRRMALGSDSFEYNIYSSEYNSREMTASRESWRFNTNSSGESETQAFKGRTGAQQSHHSGRQF | 780 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 38083316 | 38086376 | + | CePI673135_05g027630.1 | Cec05g2763 | 204566 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec05g2763 | 780 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 532 | 544 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec05g2763 | 780 | FunFam | Proline-rich receptor-like protein kinase PERK8 | 384 | 486 | - | - | |
Cec05g2763 | 780 | Gene3D | Phosphorylase Kinase; domain 1 | 380 | 486 | - | - | |
Cec05g2763 | 780 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Cec05g2763 | 780 | Gene3D | Transferase(Phosphotransferase) domain 1 | 487 | 702 | - | - | |
Cec05g2763 | 780 | SUPERFAMILY | Protein kinase-like (PK-like) | 392 | 685 | IPR011009 | - | |
Cec05g2763 | 780 | MobiDBLite | consensus disorder prediction | 27 | 49 | - | - | |
Cec05g2763 | 780 | MobiDBLite | consensus disorder prediction | 218 | 293 | - | - | |
Cec05g2763 | 780 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 264 | 721 | IPR047117 | - | |
Cec05g2763 | 780 | MobiDBLite | consensus disorder prediction | 751 | 780 | - | - | |
Cec05g2763 | 780 | MobiDBLite | consensus disorder prediction | 118 | 179 | - | - | |
Cec05g2763 | 780 | MobiDBLite | consensus disorder prediction | 101 | 117 | - | - | |
Cec05g2763 | 780 | Pfam | Protein tyrosine and serine/threonine kinase | 414 | 683 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec05g2763 | 780 | ProSiteProfiles | Protein kinase domain profile. | 411 | 691 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec05g2763 | 780 | SMART | serkin_6 | 411 | 685 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec05g2763 | 780 | CDD | STKc_IRAK | 417 | 686 | - | - | |
Cec05g2763 | 780 | ProSitePatterns | Protein kinases ATP-binding region signature. | 417 | 439 | IPR017441 | GO:0005524(InterPro) | |
Cec05g2763 | 780 | MobiDBLite | consensus disorder prediction | 83 | 100 | - | - | |
Cec05g2763 | 780 | MobiDBLite | consensus disorder prediction | 1 | 293 | - | - | |
Cec05g2763 | 780 | FunFam | proline-rich receptor-like protein kinase PERK8 | 487 | 700 | - | - | |
Cec05g2763 | 780 | MobiDBLite | consensus disorder prediction | 197 | 217 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec05g2763 | Cec-Chr5:38083316 | Cec11g0254 | Cec-Chr11:2691823 | 1.90E-132 | dispersed | |
Cec05g2763 | Cec-Chr5:38083316 | Cec11g0552 | Cec-Chr11:6039190 | 1.30E-139 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72045 | PF07714 | PK_Tyr_Ser-Thr | 2.30E-44 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec05g2763 | - | - | - | 0.0 |