Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g2779 ATGAAACCCTACAACTTCTCCTTTGCGATTCCCTTCCTTCAAATACTCTTGCTATTTCGTTTTCTAATCCAATCGGCGGCTGATCCCAGAGCTACTGAGGCGGCTCTCATATGTTCCAACAACACTGCTTCGCCGCCGGAGCGATCGACCTTTGTGTCGAATTTCTTGGACTCTATGGATGCGGTTACTCCTCTTATTGCTTCACAGCGGTTTGCAGCCGTTGTGAATGGGACTGGAAATACGTCTGTTTATGCTTTTGGAGAGTGTATGAACGATCTTACTCAATCGGATTGTGATCTCTGTTTTGCCCAGATGAAAACTCAGATCCTGCGGTGTCTCCCCTTTCAGCTTGCTACTCGAGGGGGCAGACTTTTCTATGACGGGTGTTATGTTAGGTATGATTATTATAACTTCTTTAACGAATCCTCGAGTGCTGTGGATAGGACTGTATGTGGGAAATCGGATTACAGTGGGAATCGGACTATTTTTAGTGACAATGCTATGAAATTGGCGAGAAATTTGAGTGTAGTAGCGCCCAAGAACGATGGGTTTGCTGTGGGATTGGTGAATTTGAGAAATGTATCAGTTTATGGATTGGGTCAGTGTTGGAAATTTGTGAAAGGGACTTCTTGTTCCAAGTGTTTGGTTGATGCAGCTAAGGAAATTGGTTCTTGTCCTCCAAAAACTGAAGGAAGGGTGTTGAATGCTGGCTGTTACTTCAGATATTCAACTGAACGATTTTATTTCAACAGCACGGCAACCGCTACCGGAGGAAATGGAAGCCGTCGTCTGGCGGTAATTTTGGCTTCAGTATCTGCTGCTGTGGCTGCTGCATTGATTATTTCAACGGTTGTTTTCTGTGCCAGAAGGAGAGTAGTCAGGAAACGCAAAGAGAAAAAGCAGCTCGGTCCTCTCGTGGCTATTGTTAACAAGTCCAAGCTTAATTTTTCATATGAGACTCTTGAGAGGGCCACAAATTACTTTGACCAATCCAATAAACTAGGACAAGGAGGTTCTGGTTCAGTTTATAAAGGAACCCTATCAGATGGCAGAGTTGTAGCAATCAAGAGGCTTTTCTTCAATACAAGACAATGGGTGGACCATTTCTTTAATGAAGTAAATCTTATTAGTGGCATCCGACACAAAAATCTTGTAGGGCTGCTGGGATGCAGCATTACAGGCCCTGAAAGCCTCCTTGTTTATGAATACGTGCCAAATCAGAGCTTGCACGATTACCTGTTTGGTAACAAGAATGTCCAGCCACTGAGTTGGGAATCCAGGTTTAAGATTGTCTTAGGCACAGCTGAAGGCTTGGCTTATCTTCATGAGGAGTCAAATGTGAAAATCATTCATCGCGACATAAAACTAAGCAATATTCTGCTGGACAATGATTTCACTCCGAAGATTGCTGATTTTGGACTTGCTAGACTGCTTCCCGAAGATAAGACACACATTAGTACCGCAATTGCTGGCACACTAGGTTACATGGCTCCTGAATATGTAGTGCGTGGCAAGTTGTCTGAAAAGGCCGATGTTTACAGTTTTGGAGTTTTTGCCATTGAAGTCATCACTGGAAGGAGGAATAATCACTTCTATCAAGATTCAACGTCCATCTTACAAAAGGTATGGAATTTGTATGGAGAGGGAAGGCTATATGCAGCTGTCGATCCTATATTAGCGGGTGATTATCCACGAGACGAAGCATCTCGGTTGCTTCAAATAGGTCTAGTTTGCGTGCAAGCCTTTGCTGATCTAAGGCCATCCATGTCAATGGTTGTGAAAATGCTTACAGCAAATTACGAGATTCCCCAGCCAAAACAGCCTCCGTATCTTCATCCTTCAAGTGGAAACATAAAATCCCAAAATTCTTCAGACTCATCCAATCCCATTTTGTATTATAACTCGCGATCTTCGCAAAATAGCATGACCCAAAGCACAATCGACCCCAGATGA 1953 43.42 MKPYNFSFAIPFLQILLLFRFLIQSAADPRATEAALICSNNTASPPERSTFVSNFLDSMDAVTPLIASQRFAAVVNGTGNTSVYAFGECMNDLTQSDCDLCFAQMKTQILRCLPFQLATRGGRLFYDGCYVRYDYYNFFNESSSAVDRTVCGKSDYSGNRTIFSDNAMKLARNLSVVAPKNDGFAVGLVNLRNVSVYGLGQCWKFVKGTSCSKCLVDAAKEIGSCPPKTEGRVLNAGCYFRYSTERFYFNSTATATGGNGSRRLAVILASVSAAVAAALIISTVVFCARRRVVRKRKEKKQLGPLVAIVNKSKLNFSYETLERATNYFDQSNKLGQGGSGSVYKGTLSDGRVVAIKRLFFNTRQWVDHFFNEVNLISGIRHKNLVGLLGCSITGPESLLVYEYVPNQSLHDYLFGNKNVQPLSWESRFKIVLGTAEGLAYLHEESNVKIIHRDIKLSNILLDNDFTPKIADFGLARLLPEDKTHISTAIAGTLGYMAPEYVVRGKLSEKADVYSFGVFAIEVITGRRNNHFYQDSTSILQKVWNLYGEGRLYAAVDPILAGDYPRDEASRLLQIGLVCVQAFADLRPSMSMVVKMLTANYEIPQPKQPPYLHPSSGNIKSQNSSDSSNPILYYNSRSSQNSMTQSTIDPR 650
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 38193199 38196819 - CePI673135_05g027790.1 Cec05g2779 204582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g2779 650 ProSiteProfiles Gnk2-homologous domain profile. 33 138 IPR002902 -
Cec05g2779 650 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524(InterPro)
Cec05g2779 650 Gene3D Transferase(Phosphotransferase) domain 1 404 607 - -
Cec05g2779 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec05g2779 650 SMART serkin_6 328 611 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g2779 650 Gene3D - 144 247 IPR038408 -
Cec05g2779 650 Gene3D - 32 138 IPR038408 -
Cec05g2779 650 CDD STKc_IRAK 334 597 - -
Cec05g2779 650 FunFam Cysteine-rich receptor-like protein kinase 2 294 403 - -
Cec05g2779 650 MobiDBLite consensus disorder prediction 606 650 - -
Cec05g2779 650 SUPERFAMILY Protein kinase-like (PK-like) 314 634 IPR011009 -
Cec05g2779 650 FunFam Cysteine-rich receptor-like protein kinase 3 147 247 - -
Cec05g2779 650 ProSiteProfiles Protein kinase domain profile. 328 611 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g2779 650 Gene3D Phosphorylase Kinase; domain 1 288 403 - -
Cec05g2779 650 MobiDBLite consensus disorder prediction 611 650 - -
Cec05g2779 650 FunFam Cysteine-rich receptor-like protein kinase 2 31 138 - -
Cec05g2779 650 FunFam Cysteine-rich receptor-like protein kinase 2 404 604 - -
Cec05g2779 650 Pfam Salt stress response/antifungal 151 244 IPR002902 -
Cec05g2779 650 Pfam Salt stress response/antifungal 38 135 IPR002902 -
Cec05g2779 650 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 167 633 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Cec05g2779 650 Pfam Protein kinase domain 329 529 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g2779 650 ProSiteProfiles Gnk2-homologous domain profile. 144 247 IPR002902 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g2779 Cec-Chr5:38193199 Cec10g1412 Cec-Chr10:28462798 3.70E-153 dispersed
Cec03g1129 Cec-Chr3:24499863 Cec05g2779 Cec-Chr5:38193199 8.20E-48 transposed
Cec06g0056 Cec-Chr6:530643 Cec05g2779 Cec-Chr5:38193199 1.00E-12 transposed
Cec05g2779 Cec-Chr5:38193199 Cec08g1840 Cec-Chr8:29279671 1.60E-132 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72046 PF00069 Pkinase 2.20E-44 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g2779 - - - 0.0