Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g2781 ATGGAGGTCGACGGCGGAGCTACGGCGGCTGCTCAGCCGAGGAAATTCTCTCTCCCGGTGGACTCCGAACACAAATCCACCAAATTCAACATATTCTCCGTGGCAGCGCCGCACATGCGAACGTTTCATCTCTCGTGGATTTCCTTCTGCGCTTGTTTCATTTCCAGTTTCGCGGCGGCTCCTCTGCTTCCGGTGATCCGCGACAACCTCGACTTAACCGACACCGACATTGGAAACGCCGGAATCGCCTCCGTCTCCGGCGCCGTCTTCGCCCGAATCATGATGGGTTCCGCCTGCGACTTGGTCGGACCACGTCTCGCCTCCGCTTCACTCATTCTCATAACCTCACCGGCGGTTTATTTAACCTCCATAGCTTCATCCCCTGTTTCGTTTCTCCTTGTCCGATTCTTCACCGGCTTCTCCCTCGCTACATTCGTCTCAACCCAATTCTGGATGAGTTCCATGTTCTCCTCCAACGTCGTCGGCACCGCCAACGGTGTCGCCGGCGGCTGGGGGAACCTAGGCGGCGGCGCAACACAGTTAATCATGCCGTATGTTTTCGCCATCATCGAACACATCGGCGCAACGAAATTCACCGCGTGGAGAATCGCTTTCTTCATCCCAGCGTTATTCCAAACGCTTTCCGCCTTCGCCGTTCTCCTCCTGGGCGAGGACACTCCAGACGGGAATTTCCGGCGGCTGCAGAAAACAGGGGAGAAGGCGAAAGACGAATTATCGAAAGTTGTGTTGAATGGGGTGAAGAATTACAGGGGATGGATTCTGGCATTGACTTATGGGTATAGCTTCGGAGTGGAATTGACGATTGATAATGTAATAGCGAATTACTTTTACGATAGGTTTAATTTGAATCTGCACACGGCGGGGATAGTGGCGGCGAGTTTTGGGCTGGCGAATCTGTTTTCGAGGCCTTACGGCGGAGTATTGTCGGATGTGGTGGGGAAAAGATTTGGAATGAGAGGGAGGCTGTGGGCTTTGTGGTTGGTGCAAACAATTGGGGGAATTTTGTGTGTGATTCTTGGGTTGGTTAATTCTTTGAGTGCTTCGATTGCCATTATGATCGTTTTTTCAGTGTTTGTTCAAGCTGCTTGTGGACTTACTTTTGGTGTTGTTCCTTTCGTCTCTCGAAGGTCATTAGGAGTAATATCGGGGATGACAGGTGGGGGCGGGAATGTGGGGTCGGTGCTGACTCAGCTGATATTCTTCAGAGGCAACAGATACACAAAAGAGAGAGGAATAAGTCTAATGGGAGTGATGATAATAGCTTGCACTCTCCCAGTTGCATTGATTTATTTTCCTCAATGGGGCAGTATGTTCTTTGGGCCTTCCTCCAAAATTGCTTCTGAGGAAGACTATTACTTGTCGGAATGGACTTCTGAGGAGAAGGCCAAAGGCTTCCATATGGCTAGCCTTAAGTTTGCTGAGAATAGTCGAACTGAAAGAGGCAAAAGCCTTAAGGGAACTGCTGATGCTGATCTTGCCTCCCCTAATGTTTAA 1515 50.56 MEVDGGATAAAQPRKFSLPVDSEHKSTKFNIFSVAAPHMRTFHLSWISFCACFISSFAAAPLLPVIRDNLDLTDTDIGNAGIASVSGAVFARIMMGSACDLVGPRLASASLILITSPAVYLTSIASSPVSFLLVRFFTGFSLATFVSTQFWMSSMFSSNVVGTANGVAGGWGNLGGGATQLIMPYVFAIIEHIGATKFTAWRIAFFIPALFQTLSAFAVLLLGEDTPDGNFRRLQKTGEKAKDELSKVVLNGVKNYRGWILALTYGYSFGVELTIDNVIANYFYDRFNLNLHTAGIVAASFGLANLFSRPYGGVLSDVVGKRFGMRGRLWALWLVQTIGGILCVILGLVNSLSASIAIMIVFSVFVQAACGLTFGVVPFVSRRSLGVISGMTGGGGNVGSVLTQLIFFRGNRYTKERGISLMGVMIIACTLPVALIYFPQWGSMFFGPSSKIASEEDYYLSEWTSEEKAKGFHMASLKFAENSRTERGKSLKGTADADLASPNV 504
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 38210149 38212531 - CePI673135_05g027810.1 Cec05g2781 204584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g2781 504 ProSiteProfiles Major facilitator superfamily (MFS) profile. 41 441 IPR020846 GO:0022857(InterPro)
Cec05g2781 504 Pfam Major Facilitator Superfamily 46 402 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Cec05g2781 504 CDD MFS_NRT2_like 42 435 IPR044772 GO:0015112(InterPro)
Cec05g2781 504 Gene3D MFS general substrate transporter like domains 35 231 IPR036259 -
Cec05g2781 504 FunFam High affinity nitrate transporter 2.5 34 230 - -
Cec05g2781 504 FunFam Nitrate transporter 2.1 242 443 - -
Cec05g2781 504 Gene3D MFS general substrate transporter like domains 240 443 IPR036259 -
Cec05g2781 504 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 11 489 IPR044772 GO:0005886(PANTHER)|GO:0015112(InterPro)|GO:0015112(PANTHER)|GO:0015706(PANTHER)|GO:0071249(PANTHER)
Cec05g2781 504 MobiDBLite consensus disorder prediction 483 504 - -
Cec05g2781 504 SUPERFAMILY MFS general substrate transporter 36 438 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0266 Cec-Chr3:2918267 Cec05g2781 Cec-Chr5:38210149 3.10E-174 dispersed
Cec03g0267 Cec-Chr3:2931821 Cec05g2781 Cec-Chr5:38210149 3.10E-174 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g2781 K02575 - csv:101212365 860.907