Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g2793 ATGGCTTCGAACGTCGTCGTTTCATTCTCCATCTTTCTACTGATTTTCATTTGTTCTTCACCAATCTCCACCGCCGACTCTAACCAATCTATGGTTCCGATGGCATGTTCAAGAATAAAGAAATGCGACGCCTCGTTATATCACGTCAACAGGGGCCAGCAGGCCGAGACCGAAATCGCCGCCGCGTACTCCGTCAATCCGTCGCAGATTCTGCCGGTTCCCCGCAAGGGAGTTCAAGATTACTTAATTACGGTGCCGTGTTCGTGCGAATCGGCCGACGGCGTGTCGGGAACGGCGTATTTTTACGGCACGTCGTTCAGAGTGAGAATCGGGGACTCCTTGATCGACGTGTCGAATCAAAATTATAGTGGACAAGTTTGGATATTCGGCGATCCGTTGATTTTTGCTGGAGAGGAACTTGGGGTGAAATTGTTGTGTGGATGTATAGAAGACGAGTCTAAAATCGTAGTGACTTACACGGTTCGGTCACATGATACGTTATCGCAAATAGCAAGTTTGTTATGGGCTGATGCAAGTGAAATTCATAATTTGAATGCGAATTTGATTCAAGACCCTGCCTTGATTGTTCCCGGTTGGGTTTTGTTTGTGCCGATGTACAAGACTGCGTTTCAAAGCACCAAAGAAGTGTCAGGATTTGAATCAGAAAAAACGTTGATTTTTACCATTGAGGAGATCGAAGAGGCTACGGCTAACTTCGATGAATCTCGCAAGATTGGAGAGGGCGGATATGGAACTGTTTACCATGGAGTATTAAATGAACAGGAGGTTGCAATTAAGAAAATGAAATCTAATAAATCAAAAGAGTTCTTCGCAGAACTAAAAGTCCTGTGCAGGATCCATCATATTAATGTGGTGGAGCTTCTAGGGTATGCTAGTGGAGATGACCATTTGTATTTGGTTTATGAATATGTTCAAAATGGGTCGCTTAGTGATCATCTACATGATCCATTGAAAAGAGGGTATCAACCTTTATCGTGGACTACAAGAACGCAGATAGCTTTAGACACAGCAAAGGGTATTGAATACATACACGACCACACTAAAGCACGATATGTTCACCGTGACATCAAGACAAGTAATATACTTCTTAGTGAAAGCCTTGAAGCGAAGGTTGCTGATTTTGGACTGGTAAAATTAGTCGGACGAACGAACGACGACGAACTCGTAGCGACCCGACTGGTCGGGACACCAGGGTACCTCCCTCCAGAATCTGTAAAAGAGCTGCAAGTGACACCCAAAACGGACGTATTTGCATTTGGAGTGGTTTTGGCGGAGCTAATTACAGGAAGAAGAGCTTTGGTTCGGGAAAACCAAGAGCCAAAGAGAACCAAATCACTAATCACGCTTATTTATTCAATATTCCAAGGGGAAAAGTCTGAGGCTGCTCTGGAAGCCGTCGTGGATGACAATTTGCATGGAAGCTACCCCATGGAAGATGTTTACAAGATGGGGGAGATAGCGGCGTGGTGTTTGAACGAAAATCCGGTGGGGAGACCGGAGATGCGTGAAATTGTTGCTTTGCTGTCGCAGCTTGTGACGTCCGCCGTCGAGTGGGAGGCGTCACTCGGCGGTAGCAGCCAGGTTTTCAGTGGACTCTTCACCGGAAGATGA 1632 45.83 MASNVVVSFSIFLLIFICSSPISTADSNQSMVPMACSRIKKCDASLYHVNRGQQAETEIAAAYSVNPSQILPVPRKGVQDYLITVPCSCESADGVSGTAYFYGTSFRVRIGDSLIDVSNQNYSGQVWIFGDPLIFAGEELGVKLLCGCIEDESKIVVTYTVRSHDTLSQIASLLWADASEIHNLNANLIQDPALIVPGWVLFVPMYKTAFQSTKEVSGFESEKTLIFTIEEIEEATANFDESRKIGEGGYGTVYHGVLNEQEVAIKKMKSNKSKEFFAELKVLCRIHHINVVELLGYASGDDHLYLVYEYVQNGSLSDHLHDPLKRGYQPLSWTTRTQIALDTAKGIEYIHDHTKARYVHRDIKTSNILLSESLEAKVADFGLVKLVGRTNDDELVATRLVGTPGYLPPESVKELQVTPKTDVFAFGVVLAELITGRRALVRENQEPKRTKSLITLIYSIFQGEKSEAALEAVVDDNLHGSYPMEDVYKMGEIAAWCLNENPVGRPEMREIVALLSQLVTSAVEWEASLGGSSQVFSGLFTGR 543
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 38279677 38285882 - CePI673135_05g027930.1 Cec05g2793 204596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g2793 543 Gene3D LysM domain 151 216 IPR036779 -
Cec05g2793 543 Gene3D Transferase(Phosphotransferase) domain 1 311 528 - -
Cec05g2793 543 FunFam PTI1-like tyrosine-protein kinase 3 311 529 - -
Cec05g2793 543 FunFam Kinase family protein 215 310 - -
Cec05g2793 543 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 16 210 IPR044812 GO:0019199(InterPro)|GO:0045087(InterPro)
Cec05g2793 543 ProSiteProfiles LysM domain profile. 157 203 IPR018392 -
Cec05g2793 543 Pfam Protein kinase domain 240 512 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g2793 543 Gene3D Phosphorylase Kinase; domain 1 218 310 - -
Cec05g2793 543 Pfam LysM domain 159 204 IPR018392 -
Cec05g2793 543 ProSiteProfiles Protein kinase domain profile. 239 519 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g2793 543 CDD LysM 157 203 IPR018392 -
Cec05g2793 543 ProSitePatterns Protein kinases ATP-binding region signature. 245 267 IPR017441 GO:0005524(InterPro)
Cec05g2793 543 SUPERFAMILY LysM domain 157 204 IPR036779 -
Cec05g2793 543 SMART LysM_2 158 204 IPR018392 -
Cec05g2793 543 SMART serkin_6 239 519 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g2793 543 SUPERFAMILY Protein kinase-like (PK-like) 221 515 IPR011009 -
Cec05g2793 543 ProSitePatterns Serine/Threonine protein kinases active-site signature. 358 370 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0222 Cec-Chr2:2127350 Cec05g2793 Cec-Chr5:38279677 2.20E-77 dispersed
Cec05g2793 Cec-Chr5:38279677 Cec07g1449 Cec-Chr7:30094003 3.70E-90 dispersed
Cec05g2793 Cec-Chr5:38279677 Cec11g0464 Cec-Chr11:4945963 4.30E-54 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72047 PF00069 Pkinase 7.70E-52 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g2793 - - - 0.0