Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec05g2831 | ATGTCGTCTATCACCAATACAGACTTATATGCTAAGCCTGAGATCATAATTCATGGACTAAATGCACCTCTTCTTAGATATTCAAGAATTAAAAAGCTGATTCATACAATAATGCATATCCTTTCCATCTGGGTCCTTTCTCTTCTCCTTCTCTTGTGTTCTCTGATATTGCTTCTTAAAACAAACAAGAATGTTGAAAAACACAAGAATAATAAGCTTAAAATTGTTCCTCCTCCTACCCCTCCAAAGCTTCCTTTGTTGGGTCATTTACACCTCATTGGCTCTCACCCCCATCGCTCCTTATGGAATCTTTCAAAAACACATGGCCCCATCATGCTCCTCAAATTCGGCTCGGTCCCCACCGTCGTGATCTCTTCAGCAGCCGTCGCACAAGAGTTGTTCAAACAACACGACCTTGCTTCTTGCAGTCGCCCTCGCTTAGCCGCCACAGCAAGATATTCATACAACTACTTAGACTTGATTTTTTCCCCATACGGTATTCATTGGAGGGAGGTTCGAAAGATTTGTATTCTCGAGCTGTTTAGTTCCAAACGCGTGCAATCTTTTCAGCATATTAGAGAAGAAGAAGTGAACTTATTATTGAATTCCATCTACCAATCCTCATCTTCTTCAACTTTAGTTGATTTGAAGGCAAAATCTTATTCTCTCACGGCTAATATATTGACCCGGATTGCTTTTGGGAAGAGCTTTAGAGGGAGTGAACTAGATAATGAGAATTTCGAAGGGGTTATACAAAGAGCAAGCGCAGCATTGGGAAGCTTCTCGGCGAGTGATTTATTTCCTAGTTTCGGGTGGATTATTGATCGGCTTAACGGTGTTCATGAGCGACTGGAAAAAAGCATTGCTGAGTTGGATGCTTTTTTAGAACATGTAATCAAGGATCGCATTGACTTTTGGAAGGCTTCTCAAAAGGAAGAAAATTTTGTTGATGTTTTGTTGAGAATGGAGAGAGATTGCTCTGCAACCAAATTCACCCGAGATTGCATCAAGGCACTTGTCATGGATATATTTCTAGCTGGAGTGGAAACAGGAGCAAACATGATGGTTTGGGCAATGACAGAGCTTGTTAAGAATTCAAAGGGGATGAAGAAAGTACAAGATGAGATCAGAAGCTGCATAAAAGAAGATCGAGTGAAGGAAAGCGAGCTGGAAAAGCTTGGATATCTAAAAATGGTAGTGAAGGAGGTTTTAAGGCTTCATGCGCCACTCCCACTTCTCCTACCAAGAGAAGCAATGTCACATTTTAAGCTGAATGGTTATGATATTCAACCCAAAACTCATGTTCATGTGAATGTATGGGCAATTGGACGAGACCCAGAAACTTGGACAAACCCACAAGAATTTCTTCCGGAGAGATTTATGGAAAGCAATATTGATTACAAAGGACAAAATTTTGAGTTAATACCATTTGGAGCTGGAAGAAGAATCTGTCCTGGTGTGAATATGGGAATTGCAACGTTACCTGTCCTGATGAAAAACTAA | 1503 | 40.59 | MSSITNTDLYAKPEIIIHGLNAPLLRYSRIKKLIHTIMHILSIWVLSLLLLLCSLILLLKTNKNVEKHKNNKLKIVPPPTPPKLPLLGHLHLIGSHPHRSLWNLSKTHGPIMLLKFGSVPTVVISSAAVAQELFKQHDLASCSRPRLAATARYSYNYLDLIFSPYGIHWREVRKICILELFSSKRVQSFQHIREEEVNLLLNSIYQSSSSSTLVDLKAKSYSLTANILTRIAFGKSFRGSELDNENFEGVIQRASAALGSFSASDLFPSFGWIIDRLNGVHERLEKSIAELDAFLEHVIKDRIDFWKASQKEENFVDVLLRMERDCSATKFTRDCIKALVMDIFLAGVETGANMMVWAMTELVKNSKGMKKVQDEIRSCIKEDRVKESELEKLGYLKMVVKEVLRLHAPLPLLLPREAMSHFKLNGYDIQPKTHVHVNVWAIGRDPETWTNPQEFLPERFMESNIDYKGQNFELIPFGAGRRICPGVNMGIATLPVLMKN | 500 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 38582426 | 38588035 | - | CePI673135_05g028310.1 | Cec05g2831 | 204634 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec05g2831 | 500 | Pfam | Cytochrome P450 | 78 | 498 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec05g2831 | 500 | Gene3D | Cytochrome P450 | 71 | 499 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec05g2831 | 500 | PRINTS | E-class P450 group I signature | 474 | 484 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec05g2831 | 500 | PRINTS | E-class P450 group I signature | 105 | 124 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec05g2831 | 500 | PRINTS | E-class P450 group I signature | 223 | 241 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec05g2831 | 500 | PRINTS | E-class P450 group I signature | 355 | 381 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec05g2831 | 500 | PRINTS | E-class P450 group I signature | 397 | 415 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec05g2831 | 500 | PRINTS | E-class P450 group I signature | 438 | 462 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec05g2831 | 500 | PRINTS | E-class P450 group I signature | 335 | 352 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec05g2831 | 500 | SUPERFAMILY | Cytochrome P450 | 78 | 497 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec05g2831 | 500 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 477 | 486 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cec05g2831 | 500 | FunFam | Cytochrome P450 83B1 | 63 | 500 | - | - | |
| Cec05g2831 | 500 | PRINTS | P450 superfamily signature | 475 | 484 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec05g2831 | 500 | PRINTS | P450 superfamily signature | 398 | 409 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec05g2831 | 500 | PRINTS | P450 superfamily signature | 346 | 363 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec05g2831 | 500 | PANTHER | CYTOCHROME P450 71B11-RELATED | 56 | 497 | IPR050193 | - | |
| Cec05g2831 | 500 | CDD | CYP71-like | 107 | 494 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cec05g2831 | Cec-Chr5:38582426 | Cec05g2835 | Cec-Chr5:38607187 | 1.40E-176 | dispersed | |
| Cec05g2830 | Cec-Chr5:38552146 | Cec05g2831 | Cec-Chr5:38582426 | 8.00E-180 | tandem | |
| Cec05g2831 | Cec-Chr5:38582426 | Cec05g2832 | Cec-Chr5:38596840 | 9.70E-178 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec05g2831 | - | - | - | 0.0 |