Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec05g2835 | ATGGTGCTATTATCTTCTCTACTGTTTCTTAAAACAAAGATGAAATTTGGAAGACACAATAACAAGAATGTTATTGTTCCTCCTCCAAGCCCACCAAAGCTTCCTTTCTTAGGTCATTTACACCTCATTACCTCTCTCTCCCATCGCTCTTTTTTTAACCTTTCAAAAAAATATGGCCCCGTCATCCTCCTCAAACTCGGCTCCATCCCGACTGTCATAGTCTCCTCCGCCGATGCTGCAAAAGAGGTGCTAAAAGTTCACGACCTTGCTTCTTGCAGCCGACCTCAATCCGCCGCTGGAGCAAAATTTTCATACAATTATCTAGACATTGGGTTAGCGCCATATGGTGATCATTGGAGGGAAGTTAGAAAAATTTGTGTGCTTGAGCTGTTCAGTGCTAGAAGAGTGCAATCATTTCAAATGATAAGAGAAGAAGAGATTGGTGTGCTGTTGAACTCCATTTCTCAATCTTCATCTTTTGCCACTCCAATTGATTTGAGTGAGAAATTGTACTCTCTCACTGCAAATATGATAACCCGAATTGCTTTTGGGAAGTGCTTTAGAGGAAGTGAGTTAGATAATGAGAATTTTCAAAAGGTTATTCGAGGAGGACTTGTAGCATTGGGAAGCTTTTCAGCCACTGACTTCTTTCCTAAAGTGGGTTGGATTATTGATCGGATTAGTGGTGTTCATGGGAGATTGGAGAAGAGTTTTGCTGAGTTGGATGCTTTTCTTCAACATGTAGTTGATAATCGCATTAAATTTAGGGAGATTTCTCATAATAATGATGATGATCAAGAAAACATTCTTGATGTTTTGTTGAAAATGGAGAAGGATGGCTTTGAATTTGATGCAGTGAAACTCACTAGAGATTGCACCAAAGCACTTGTCATGGATATATTTATAGCTGGAGTGGAAACAGGAGCAAACACACTTGTTTGGGCAATGACAGAGTTGGTAAAAAATCCAAAAGTGATGAAAAAGCTACAAGGTGAGATCAGAAGTTGCGTAAGAAAAAGTAAAGTAGTAAAAGAGAGGGACCTCGAAAATCTTGAATACTTAAAAGCCGTAGTGAAAGAAGTTCTAAGGTTGCATGCACCCGTCCCACTTCTGCTTCCAAGAGAAACCATGTCCCATTTTAAGCTAAATGGTTATGATATTAATCCAAAAACTCGTGTTCATGTCAACGTGTGGGCGATCGGACGAGACCCAAAATTATGGACTAACCCAGAAGCATTCTTGCCCGAGAGATTTATAGGGAGTGATATTGATTACAAAGGGCAGAATTTCGAGTTATTGCCATTTGGATCTGGTCGGAGAATTTGTCCTGGGATGAACATGGCAACCATTACAGTGGAGTTAGCATTATCTAATATGTTATTGTGTTTTGATTGGAAATTACCAAATGGAATGAAAGAAGAAGATGTGGATATGGAAGAGGAACCTGGTATTGCAATTGCCAAGAATTCACCTCTTCAGCTTCTTCCGCTCCCTTACTTCAACTCCAAACAATAG | 1515 | 39.8 | MVLLSSLLFLKTKMKFGRHNNKNVIVPPPSPPKLPFLGHLHLITSLSHRSFFNLSKKYGPVILLKLGSIPTVIVSSADAAKEVLKVHDLASCSRPQSAAGAKFSYNYLDIGLAPYGDHWREVRKICVLELFSARRVQSFQMIREEEIGVLLNSISQSSSFATPIDLSEKLYSLTANMITRIAFGKCFRGSELDNENFQKVIRGGLVALGSFSATDFFPKVGWIIDRISGVHGRLEKSFAELDAFLQHVVDNRIKFREISHNNDDDQENILDVLLKMEKDGFEFDAVKLTRDCTKALVMDIFIAGVETGANTLVWAMTELVKNPKVMKKLQGEIRSCVRKSKVVKERDLENLEYLKAVVKEVLRLHAPVPLLLPRETMSHFKLNGYDINPKTRVHVNVWAIGRDPKLWTNPEAFLPERFIGSDIDYKGQNFELLPFGSGRRICPGMNMATITVELALSNMLLCFDWKLPNGMKEEDVDMEEEPGIAIAKNSPLQLLPLPYFNSKQ | 504 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 38607187 | 38610076 | - | CePI673135_05g028350.1 | Cec05g2835 | 204638 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec05g2835 | 504 | SUPERFAMILY | Cytochrome P450 | 28 | 496 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec05g2835 | 504 | PRINTS | P450 superfamily signature | 356 | 367 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec05g2835 | 504 | PRINTS | P450 superfamily signature | 433 | 442 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec05g2835 | 504 | PRINTS | P450 superfamily signature | 303 | 320 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec05g2835 | 504 | PRINTS | P450 superfamily signature | 442 | 453 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec05g2835 | 504 | PANTHER | CYTOCHROME P450 71B11-RELATED | 9 | 496 | IPR050193 | - | |
| Cec05g2835 | 504 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 435 | 444 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cec05g2835 | 504 | Gene3D | Cytochrome P450 | 13 | 494 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec05g2835 | 504 | PRINTS | E-class P450 group I signature | 355 | 373 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec05g2835 | 504 | PRINTS | E-class P450 group I signature | 396 | 420 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec05g2835 | 504 | PRINTS | E-class P450 group I signature | 442 | 465 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec05g2835 | 504 | PRINTS | E-class P450 group I signature | 173 | 191 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec05g2835 | 504 | PRINTS | E-class P450 group I signature | 55 | 74 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec05g2835 | 504 | PRINTS | E-class P450 group I signature | 432 | 442 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec05g2835 | 504 | PRINTS | E-class P450 group I signature | 292 | 309 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec05g2835 | 504 | PRINTS | E-class P450 group I signature | 79 | 100 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec05g2835 | 504 | PRINTS | E-class P450 group I signature | 312 | 338 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec05g2835 | 504 | FunFam | Cytochrome P450 83B1 | 14 | 495 | - | - | |
| Cec05g2835 | 504 | CDD | CYP71-like | 57 | 492 | - | - | |
| Cec05g2835 | 504 | Pfam | Cytochrome P450 | 28 | 486 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cec05g2831 | Cec-Chr5:38582426 | Cec05g2835 | Cec-Chr5:38607187 | 1.40E-176 | dispersed | |
| Cec05g2832 | Cec-Chr5:38596840 | Cec05g2835 | Cec-Chr5:38607187 | 6.80E-291 | dispersed | |
| Cec05g2833 | Cec-Chr5:38604559 | Cec05g2835 | Cec-Chr5:38607187 | 5.50E-32 | dispersed | |
| Cec05g2835 | Cec-Chr5:38607187 | Cec06g1942 | Cec-Chr6:32760195 | 7.20E-112 | dispersed | |
| Cec05g2834 | Cec-Chr5:38604993 | Cec05g2835 | Cec-Chr5:38607187 | 5.70E-54 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec05g2835 | - | - | - | 0.0 |