Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g2841 ATGGCGGAAACCGGCGTATACGGCCGTTTTCTGGCGGGGAGTTTAGACCCAAGAGCCCAAGAGTTCCGGCCAAGGCATTCCACCACTCTGTTCATGCCGCAGCCCCATCGGGTTTTCTTTCCGTACCCACCAATTGCTGATGTTCCTCTCCTGCCGTACTGCGACGGCGGTGTAACTTACGCGCAATTTCCAGCGGCGGAGCCGGCGTACTTTCCGATGCGGTTGCCGGTGTCGTTGGTTGCGACTCGGTCGCTGGTGATGAGTTCGGTTCCTTGCGACGTAAGCGAGACGATGGTGAGAAGGGAATTGGAAGCGTTTGGGGAGGTCCGAGGAGTGCAAATGGAGAGAGTTAAAGAAGGGATTGTAATTGTTCATTTCTACGATATTCGCCACGCCGAGAGAGCTTTTCGAGAGATTCGGGATCAGCACATGCACCATCAATGTCGTCTTCGTACCTACTTCAACAGCAATAATAACGGTTTCTTGTTTTCAAATTCCCCTCTCCCTCGCCCTTCTCCGACGCCTGGCCTCATCGCCGGCCATGCTGTCTGGGCTCAGTTCATCGTTCCGGCTGGCAAGAATCAGGGCACCATCGTCGTCTTCAATTTGGATTCCACCGTTTCCACTTCTTGTCTCAGAGAAATCTTCGAGGCTTTTGGACCCGTGAAGGAGTTGAGAGAGACGCCATTGAAGAAACAACAAAGGTTCGTTGAATTTTTCGACATCAGGGACGCTGGAAACGCTCTTAAGGAGATGAACGGAAAGGAAATCAATGGAAAACCGGTTGTTATTGAGTTCAGTCGGGCGGGAGGTCATGGCAACAAGTTCTTCAATGCCAACTTGACTGCTCCGGCCATCTGCGGCTCGAATGATATATACTCCAGGAGTCTAAAATGCCCACCGCCGCCGCCGAGAAATTTCTCTGGTGGGGCAGCTTCAAATGTTCCGCCACGCTGGTATTATTCGAAACCCCATAGTTCTAGGAAATTGAATCCGAGGAAGGGGAGTCGAAGCCCGAGAAACCCCAGGAAAAGCTTGGAGGCCGAGGATGTGAATGGAAAAATGGCTTCCCTCGATTTGGAAGGCGGAGGTGTGTGTAATGAAATTGAAGAGAGAGAATCATGTGAGGTTTTGAGAAAGAATTCAAAGACCAGCCACAGTAGTCCCGTTGTAGCTGCTGACCAACAACAACAACTGCAGCCCAGTAGGAATAAGCTAAGGAAATGTAGACTGTCTAGGAAATTCGATACTCGATTCCTGATAGACAATAACGACTCCGATTGCAAAGATTCGAGAACCACTGTGATGATCAAGAACATCCCTAACAAGTACAGTCAGAAATTGTTGTTGAACATGCTGGACAATCATTGCATTCACTGCAACGAGCAGATGGGCGATGGCCATAACCAACCACTTTCCTCCTACGATTTTGTATATCTCCCCATTGATTTCAACAACAAGTGCAATGTTGGATATGGGTTTGTAAACATGACCTCACCGGAGGCCACATGGAGGTTGTACAAGGCGTTTCATCTTCAACCTTGGGAGGTTTTCAACTCAAGAAAAATCTGTGAAGTCACCTATGCTAGAGTACAGGGACTGGAATCTCTGAAGGAGCACTTTAAGAACTCAAAGTTCCCATGCGAGATGGACCACTACCTGCCAGTAGTGTTTTCACCGCCTCGGGACGGGAGGCTACTGACGGAGCCACTGCCGATTGGCGGCCAGAGACAGCCCGTCTCCATGGGCTTCTCAACTACTACTCTATCTTCTGGGAATGCTGAGATGGACGGTGAAGATGATGTTGCAATTGCGACAACACTGGTTGACCAACAAGAGGAAGGCATGAATGGAAGCAGCAGTAGCAAAAGTGGCGGTGGTGTTGACGAAGAATACGACGGTGATGAGTATCAATTAGCAGCAGTCAGCTTTGGTGAAGTCCATGCAATTGCTTCAGCAGATGATAAAAAGGGCAGAAGGAGAATAGTGAAGAAGTCCGTACGAATGGGAAGAAAGAAACAGTATTATGGCGTTATGGGAAAGAAGAAAAATGGGCTTTTCAGATATGCTGATTGGGTGGATAAGTTGCTGATTTTAATGGGTTCTTTAGGGAGTATTGGAGATGGGATTACAACTCCACTCACTATGATTGTTCTCAGTGGTATGATCAATAACTATTCTGCCTTTGATTCCAACTCTTTTTCCAATCATGTAGTGGACAAGTATGCACTCAATCTGCTTTATATTGCTATTGGAGTTGGACTCTGTGCTTTCTTTGAGGGAGTGTGCTGGACTAGGACAGCAGAAAGACAGACATCTCGCATGAGAATGGAGTACCTAAAATCAGTTTTGAGACAAGAAGCTGGTTTTTTCGACAGTAATCAAGCCGCTTCTTCTACATTCCTTATTGTTTCCTCCATCACTTCTGATTGCCACACTATCCAAGATACCATAGCTGAAAAGATACCAAACTTTCTGGCTCACGTCTCCGGCTTTATCTTCTGCATTCCTGTTGCATTTATGCTCTCATGGAAGCTTGCTTTGGCTGCCCTTCCATTCTCTCTCATGTTTGTTATTCCAGGGGTTGGATTTGGGAAGGTTTACAAGAACTTAGGTGTCAAGGCCAAAGAGTCTTATGTGGTTGCTGGTAGCATTGCCGAACAAGCGGTCTCTTCGATACGCACTGTGTATTCATGCGTAGGAGAGCTCCAAACTCTAGAGAAGTTCAGTCATGCGCTTCAAAAAAGTATGAACTTTGGCACTAAACAAGGCCTTGGGAGAGGACTTATGATGGGCAGCATGGCAATGATATATGCTGCTTGGGCATTTCAGGCATGGATAGGCAGTATTCTTGTCACTGAAAGAGGAGAAACAGGTGGAGCTATTTTGATATCTGGAATATGTATCATTTTTGGTGGACTGTGTGCTATGAATGCACTCCCAAATCTCTCTTTCATCTCTGAGTCAACAATTGCTGCATCTCGCATTTTCGAAATGACTGACCGCGTTCCCACCATAGATGCTGAAGATGGTAGAGGAAAATCTTTGGACTATTTAAGAGGAAAAATTGAATTTAGAGATGTTGAATTTTCCTATCCTTCCAGACCGGCAACCCCCATTCTTCAAGGACTTAATCTCAAAATAAAGGCCGGGGAGACAGTAGGCCTTGTTGGAGGTAGTGGCTCAGGCAAGTCCACTGTGATTCATTTATTGGAGAGATTCTATGACCCTGTCAAAGGAGACATTCTTCTTGATGGTCATAAGATAAAGAAGCTTCAGCTCAAATGGCTGAGATCCCAAATGGGATTAGTCAATCAAGAGCCAATTCTATTTGCAACCTCCATAAAGGAAAATATTTTGTTTGGTAAGGAAGGAGCTTCAATGCAACTTGTTAAAAGAGCAGCTAAGGCTGCAAATGCTCATGATTTCATTGCAACATTACCTGATGGATATGAGACTCAAGTGGGGCAATTTGGTGTTCAATTGTCTGGAGGGCAAAAGCAAAGAATTGCAATAGCAAGGGCTCTAATCAGAGATCCCAAAATTCTTCTATTGGATGAAGCAACCAGTGCTTTGGATGCAGAGTCTGAAAGAATTGTACAAGATGCCCTGGACCAAGTTTCACATGGAAGGACTACCATTGTCATTGCACACCGTCTCTCGACTATCCAAAAGGCTGATCAGATTCTTGTTCTTCAGTCAGGTAGAGTGGTAGAGTCTGGTTCTCATGAGGAGTTACTTCAAAGAAATAATGAAGGAATTTACAGAAAAATGGTGCAATTGCAGCAATCTTGTATGGAAAATGAAGCTTCTAGTTCTTTGTATCATTCTACTAGAGAAACAAATCTCCAACAAATAGTAGGAGCCAAAACTCCCTTGACACCAATAAACCAAATATCAGTTCGTCGAAGCAGCCCAATCTGGCACAGCAGTCCAGTATATTCCATCAGCATGTCATCTCCAGACTCGGTCGACGTTGACTCTAGTGATTACAGTTATTGTGAAGGCTTGAAGAATACCTCGAGTTCTTCTCAATCTCCTTTGCAATGGCGCCTCTGGAGATTGAATGCACCTGAGTGGAAACAAGCATTACTTGGTTGTATGGGTGCTATAGGCACTGGAGTTACTCAGCCAATATATTCCTATTGCTTAGGAACAATCACCTCAGTTTACTTCCTAAAGGACAGTGAGGCTATTAAATCAAACATTCGATTCTATTGCTTCGTATTTTTAGGCATAACAGTTCTTAGTTGTATATCCAATCTAGTCCAGCATTACAGCTTTGCAATCATGGGAGAAAATTTAACCAAGAGGGTGAGAGAAAAAATGCTTGAAAAAATCATGACCTTTGAGATTGGATGGTTTGATCAAGACGAGAATACAAGTGCCGCGATATGTGCACGACTAGCTGTTGAAGGAAACTTGGTTAGATCTCTTGTAGCAGAACGAACATCACTATTGGTTCAGGTAGTTGTGACTGCCACATTCGCATTTGTGCTTGGGTTAGTTGTGACATGGAGAGTAGCCATTGTAGCAATTGCTATGCAACCACTTATTATTGGAAGCTTCTATTCAAGAAAGGTTCTGATGAGAAGTATATCTGAGAAGGCTAGGAAATCACAAGGTGAAGGCAGTCAACTAGCTAGTGAAGCCATTACCAACCACAGAACTGTTGCTGCATTTTCTTCTCAAGATAGGATTTTGAGTCTGTTTGAAGCTTCAATGGAATCTCCCAAGAAGGAGAATGTAAAACAATCATGGATTTCGGGTTTTGGTTTATTCAGCTCCCTATTTCTTACTACAGCAACAACAGCTTTGACACTGTGGTATGGAGGGAGACTAATAAATCAAGGATTAGTAACATCAAAACAACTTTTCCAAGCATTTTTCATCTTGATGAGCACTGGAAAGAACATTGCAGATGTAGGAAGCATGTCATCAGATATAGCAAAAGGTGCAAATGCCATAGGATCAATTTTTGGAATCCTAGATAGAGAAACTGAAATAGACCCTCAACAACTTGAAGGGTTAAAAGTTAAAGAGACAATTTGTGGAGAAGTAGAATTGAAGAATGTATTTTTCGCTTACCCGGCTAGGCCTAACCAATTGATCTTCAAGGGACTGAATCTAAAGATTGAAGCTGGAACAACAGTTGCGCTGGTTGGGCAGAGTGGTTCGGGTAAATCTACTGCCATTGGATTGATCGAAAGATTTTACGATCCTCAAAAGGGATTAGTCCTCATTGATGGAATAGACATCAAGAGCTATAATCTGAGAAGTTTGAGGTCACACATTGCGCTAGTGAGTCAAGAACCCACACTTTTCGCAGGAAGTATACGCAATAACATTCTATTCGGGCAAGACGAACGTTCCGAAAACGAAATTAGGAAGGCTGCAAAACTGGCCAACGCTCATGAGTTCATTAGTTGTATGAAGGATGGGTATGATACTCAATGTGGAGAAAGAGGAGTTCAGTTATCAGGAGGTCAGAAGCAGAGAATAGCTTTAGCAAGAGCCATATTGAAGAATCCAAAAATCCTTCTACTAGATGAGGCAACCAGTGCTTTGGATAGCCTGTCACAGACTTTAGTCCAAGAAGCATTGGAAAAGATGATGGTTGGTAGAACAAGCCTCGTCCTCGCTCATCGATTATCGACTATACAGAAAGCCGATTCCATAGCTGTAACAAAACAAGGTAAGATTATTGAACAAGGATCACACTTGGATCTACTTGGACGTGGACAAAGTGGAGCTTACTACTCTCTGATTAACCAGCTAAAAACTCAATCTCTCTGTTATGGAATCAATAAATAA 5814 43.96 MAETGVYGRFLAGSLDPRAQEFRPRHSTTLFMPQPHRVFFPYPPIADVPLLPYCDGGVTYAQFPAAEPAYFPMRLPVSLVATRSLVMSSVPCDVSETMVRRELEAFGEVRGVQMERVKEGIVIVHFYDIRHAERAFREIRDQHMHHQCRLRTYFNSNNNGFLFSNSPLPRPSPTPGLIAGHAVWAQFIVPAGKNQGTIVVFNLDSTVSTSCLREIFEAFGPVKELRETPLKKQQRFVEFFDIRDAGNALKEMNGKEINGKPVVIEFSRAGGHGNKFFNANLTAPAICGSNDIYSRSLKCPPPPPRNFSGGAASNVPPRWYYSKPHSSRKLNPRKGSRSPRNPRKSLEAEDVNGKMASLDLEGGGVCNEIEERESCEVLRKNSKTSHSSPVVAADQQQQLQPSRNKLRKCRLSRKFDTRFLIDNNDSDCKDSRTTVMIKNIPNKYSQKLLLNMLDNHCIHCNEQMGDGHNQPLSSYDFVYLPIDFNNKCNVGYGFVNMTSPEATWRLYKAFHLQPWEVFNSRKICEVTYARVQGLESLKEHFKNSKFPCEMDHYLPVVFSPPRDGRLLTEPLPIGGQRQPVSMGFSTTTLSSGNAEMDGEDDVAIATTLVDQQEEGMNGSSSSKSGGGVDEEYDGDEYQLAAVSFGEVHAIASADDKKGRRRIVKKSVRMGRKKQYYGVMGKKKNGLFRYADWVDKLLILMGSLGSIGDGITTPLTMIVLSGMINNYSAFDSNSFSNHVVDKYALNLLYIAIGVGLCAFFEGVCWTRTAERQTSRMRMEYLKSVLRQEAGFFDSNQAASSTFLIVSSITSDCHTIQDTIAEKIPNFLAHVSGFIFCIPVAFMLSWKLALAALPFSLMFVIPGVGFGKVYKNLGVKAKESYVVAGSIAEQAVSSIRTVYSCVGELQTLEKFSHALQKSMNFGTKQGLGRGLMMGSMAMIYAAWAFQAWIGSILVTERGETGGAILISGICIIFGGLCAMNALPNLSFISESTIAASRIFEMTDRVPTIDAEDGRGKSLDYLRGKIEFRDVEFSYPSRPATPILQGLNLKIKAGETVGLVGGSGSGKSTVIHLLERFYDPVKGDILLDGHKIKKLQLKWLRSQMGLVNQEPILFATSIKENILFGKEGASMQLVKRAAKAANAHDFIATLPDGYETQVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALDAESERIVQDALDQVSHGRTTIVIAHRLSTIQKADQILVLQSGRVVESGSHEELLQRNNEGIYRKMVQLQQSCMENEASSSLYHSTRETNLQQIVGAKTPLTPINQISVRRSSPIWHSSPVYSISMSSPDSVDVDSSDYSYCEGLKNTSSSSQSPLQWRLWRLNAPEWKQALLGCMGAIGTGVTQPIYSYCLGTITSVYFLKDSEAIKSNIRFYCFVFLGITVLSCISNLVQHYSFAIMGENLTKRVREKMLEKIMTFEIGWFDQDENTSAAICARLAVEGNLVRSLVAERTSLLVQVVVTATFAFVLGLVVTWRVAIVAIAMQPLIIGSFYSRKVLMRSISEKARKSQGEGSQLASEAITNHRTVAAFSSQDRILSLFEASMESPKKENVKQSWISGFGLFSSLFLTTATTALTLWYGGRLINQGLVTSKQLFQAFFILMSTGKNIADVGSMSSDIAKGANAIGSIFGILDRETEIDPQQLEGLKVKETICGEVELKNVFFAYPARPNQLIFKGLNLKIEAGTTVALVGQSGSGKSTAIGLIERFYDPQKGLVLIDGIDIKSYNLRSLRSHIALVSQEPTLFAGSIRNNILFGQDERSENEIRKAAKLANAHEFISCMKDGYDTQCGERGVQLSGGQKQRIALARAILKNPKILLLDEATSALDSLSQTLVQEALEKMMVGRTSLVLAHRLSTIQKADSIAVTKQGKIIEQGSHLDLLGRGQSGAYYSLINQLKTQSLCYGINK 1937
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 38657075 38668452 - CePI673135_05g028410.1 Cec05g2841 204644

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g2841 1937 SMART rrm1_1 197 265 IPR000504 GO:0003723(InterPro)
Cec05g2841 1937 SMART rrm1_1 84 153 IPR000504 GO:0003723(InterPro)
Cec05g2841 1937 FunFam Terminal EAR1-like 1 385 538 - -
Cec05g2841 1937 SUPERFAMILY RNA-binding domain, RBD 427 514 IPR035979 GO:0003676(InterPro)
Cec05g2841 1937 Pfam RNA recognition motif 2 432 542 IPR007201 -
Cec05g2841 1937 Pfam ABC transporter transmembrane region 700 960 IPR011527 GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro)
Cec05g2841 1937 Pfam ABC transporter transmembrane region 1365 1634 IPR011527 GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro)
Cec05g2841 1937 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1015 1262 IPR027417 -
Cec05g2841 1937 FunFam ABC transporter B family member 4 1623 1930 - -
Cec05g2841 1937 MobiDBLite consensus disorder prediction 377 404 - -
Cec05g2841 1937 MobiDBLite consensus disorder prediction 304 352 - -
Cec05g2841 1937 Pfam ABC transporter 1041 1190 IPR003439 GO:0005524(InterPro)|GO:0016887(InterPro)
Cec05g2841 1937 SMART AAA_5 1050 1236 IPR003593 GO:0016887(InterPro)
Cec05g2841 1937 SMART AAA_5 1714 1907 IPR003593 GO:0016887(InterPro)
Cec05g2841 1937 PANTHER ABC TRANSPORTER B FAMILY 669 1286 IPR039421 GO:0005887(PANTHER)|GO:0042626(PANTHER)
Cec05g2841 1937 MobiDBLite consensus disorder prediction 610 630 - -
Cec05g2841 1937 FunFam ABC transporter B family member 4 1013 1270 - -
Cec05g2841 1937 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1681 1924 IPR027417 -
Cec05g2841 1937 MobiDBLite consensus disorder prediction 381 404 - -
Cec05g2841 1937 ProSitePatterns ABC transporters family signature. 1162 1176 IPR017871 GO:0005524(InterPro)|GO:0016887(InterPro)
Cec05g2841 1937 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1023 1259 IPR003439 GO:0005524(InterPro)|GO:0016887(InterPro)
Cec05g2841 1937 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 83 157 IPR000504 GO:0003723(InterPro)
Cec05g2841 1937 MobiDBLite consensus disorder prediction 610 626 - -
Cec05g2841 1937 Gene3D ABC transporter type 1, transmembrane domain 1593 1675 IPR036640 GO:0005524(InterPro)|GO:0016020(InterPro)
Cec05g2841 1937 Gene3D ABC transporter type 1, transmembrane domain 1343 1591 IPR036640 GO:0005524(InterPro)|GO:0016020(InterPro)
Cec05g2841 1937 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 196 269 IPR000504 GO:0003723(InterPro)
Cec05g2841 1937 CDD ABC_MTABC3_MDL1_MDL2 1687 1925 - -
Cec05g2841 1937 ProSitePatterns ABC transporters family signature. 1826 1840 IPR017871 GO:0005524(InterPro)|GO:0016887(InterPro)
Cec05g2841 1937 Gene3D - 80 155 IPR012677 -
Cec05g2841 1937 CDD ABC_6TM_Pgp_ABCB1_D1_like 698 996 - -
Cec05g2841 1937 Pfam ABC transporter 1706 1854 IPR003439 GO:0005524(InterPro)|GO:0016887(InterPro)
Cec05g2841 1937 Gene3D ABC transporter type 1, transmembrane domain 686 1282 IPR036640 GO:0005524(InterPro)|GO:0016020(InterPro)
Cec05g2841 1937 Pfam RNA recognition motif 198 262 IPR000504 GO:0003723(InterPro)
Cec05g2841 1937 SUPERFAMILY ABC transporter transmembrane region 1351 1670 IPR036640 GO:0005524(InterPro)|GO:0016020(InterPro)
Cec05g2841 1937 CDD ABC_6TM_Pgp_ABCB1_D2_like 1353 1669 - -
Cec05g2841 1937 SUPERFAMILY ABC transporter transmembrane region 686 1007 IPR036640 GO:0005524(InterPro)|GO:0016020(InterPro)
Cec05g2841 1937 CDD ABC_MTABC3_MDL1_MDL2 1023 1262 - -
Cec05g2841 1937 Gene3D - 1013 1263 IPR027417 -
Cec05g2841 1937 Gene3D - 1676 1925 IPR027417 -
Cec05g2841 1937 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1687 1923 IPR003439 GO:0005524(InterPro)|GO:0016887(InterPro)
Cec05g2841 1937 CDD RRM3_EAR1_like 432 533 IPR034458 -
Cec05g2841 1937 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 699 988 IPR011527 GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro)
Cec05g2841 1937 SUPERFAMILY RNA-binding domain, RBD 83 269 IPR035979 GO:0003676(InterPro)
Cec05g2841 1937 Gene3D - 191 275 IPR012677 -
Cec05g2841 1937 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1364 1651 IPR011527 GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:0140359(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g2841 K05658 - - csv:101217411 2110.49
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0930 Cec-Chr3:12474869 Cec05g2841 Cec-Chr5:38657075 1.70E-27 dispersed
Cec05g2841 Cec-Chr5:38657075 Cec09g1942 Cec-Chr9:36373206 3.30E-290 dispersed
Cec01g0540 Cec-Chr1:5610682 Cec05g2841 Cec-Chr5:38657075 6.40E-69 transposed
Cec03g1096 Cec-Chr3:22962810 Cec05g2841 Cec-Chr5:38657075 3.10E-21 transposed
Cec03g1675 Cec-Chr3:34938257 Cec05g2841 Cec-Chr5:38657075 0.00E+00 transposed
Cec05g1648 Cec-Chr5:27010256 Cec05g2841 Cec-Chr5:38657075 0.00E+00 transposed
Cec05g2803 Cec-Chr5:38353737 Cec05g2841 Cec-Chr5:38657075 3.10E-73 transposed
Cec06g0173 Cec-Chr6:1746653 Cec05g2841 Cec-Chr5:38657075 2.10E-11 transposed
Cec09g1971 Cec-Chr9:36785314 Cec05g2841 Cec-Chr5:38657075 0.00E+00 transposed
Cec09g2041 Cec-Chr9:37458530 Cec05g2841 Cec-Chr5:38657075 2.60E-63 transposed
Cec05g2841 Cec-Chr5:38657075 Cec08g1814 Cec-Chr8:29125885 1.70E-145 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g598 . . . . . . Bma14g01833 . . . . . . . Sed04g0552 . Cpe01g01579 Bhi07g01835 Tan04g0132 Cmetu10g1346 Lac13g0115 Hepe10g0058 . . Cla05g02618 Cam05g2805 Cec05g2841 Cco05g2873 Clacu05g2809 Cmu05g2657 Cre05g2773 . . . . Lsi04g00631 Csa05g02256 Chy10g00826 Cme10g00605 Blo06g00838 . Bda07g01649 . . . . . . . . Cma04g01791 Cma05g00053 Car04g01806 Car05g00041 . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000338 3 4 5 4 3 4 2 4 4 4 4 4 7 4 4 8 4 5 4 4 4 4 6 4 4 4 7 6 4 8 136