Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec05g2865 | ATGGATTCAAATTCAAAGAAATCCAACAAAATCAGAGACATCGTACGGCTTCAACAGATCCTGAAGAAATGGCGGAAGCTAGCGAACTCGTCGAAGACGGCCAACAAAATCTCCGGCACGGCGGCAGGACCTGCCGGAAAGAGCATAAAGTTTCTGAAACGGACGTTATCGTCGGCCGGCGGGGAAAGCTGCGGCGGCGCAGTACCGAAAGGCTATTTGGCGGTGAGCGTGGGGGAGGAGCAAAAGCGATTTGTGATACCGACGCAGTATTTAGGGCATCCGGCTTTTGAGATTCTGTTAAGAGAAGCGGAGGAGGAGTTCGGATTTCAACAAACGGGGGTTTTGAGGCTGCCGTGTGAAGTAACAGTGTTTGAAAATGTGGTGAAATTGGTGGAGGAAAAGAAGAAAGGGGACTTGTTGTTAGGGGGAGAAGAGGTTTTGAGTTTTTGTTCATTGGAAACGCTGCAGTTAACGCCGTCGCACCGTCCGCAGAGTCCAATGTGCAGATAG | 510 | 50.39 | MDSNSKKSNKIRDIVRLQQILKKWRKLANSSKTANKISGTAAGPAGKSIKFLKRTLSSAGGESCGGAVPKGYLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVTVFENVVKLVEEKKKGDLLLGGEEVLSFCSLETLQLTPSHRPQSPMCR | 169 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 38844301 | 38844810 | + | CePI673135_05g028650.1 | Cec05g2865 | 204668 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec05g2865 | 169 | Pfam | Auxin responsive protein | 16 | 130 | IPR003676 | GO:0009733(InterPro) | |
| Cec05g2865 | 169 | PANTHER | AUXIN-INDUCED PROTEIN-LIKE-RELATED | 17 | 130 | IPR003676 | GO:0009733(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cec02g1951 | Cec-Chr2:37364617 | Cec05g2865 | Cec-Chr5:38844301 | 8.60E-15 | dispersed | |
| Cec04g1161 | Cec-Chr4:31195623 | Cec05g2865 | Cec-Chr5:38844301 | 1.60E-13 | dispersed | |
| Cec05g2865 | Cec-Chr5:38844301 | Cec11g0003 | Cec-Chr11:57289 | 9.10E-19 | dispersed | |
| Cec05g2865 | Cec-Chr5:38844301 | Cec09g2364 | Cec-Chr9:40472103 | 1.10E-13 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec05g2865 | K14488 | - | csv:101216710 | 273.092 |