Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g2872 ATGTGGTTACCAAGATACAGCTTAGAAAGAAAAGAGAGATTGAATGTGAATGGATTTGTGGCAGTGGCAATTGATAAAGACAAAGGAAGCCAAGGAGCTCTCAAATGGGCGATTGATCATTTGCTTCAAAGAGGACACACTATTTTCCTCATCCATGTCAAACTCAGATCTCCTTCTAATTCTTCCCAAAAGATGAGTTTGAAATCTGACTCTGAAGCCAGTGTCAGAGAATTATTCCTTCCTTTTCGTTGCTTTTGTACTCGTAAGGATATACAATGCAAAGATGTTGTGTTGGAAGATACAGATGTAGCAAAGGCCATAATTGAGTATGCTGCAAATACAGCCATAGAGAACATTGTCGTGGGTGCTTCAGCAAAATCTGGCTTCTTAAGATTCAAGGCAACTGATGTTCCTGGCAGTGTAGTGAAAGGAGCACCAGATTTTTGTAATGTGTTTGTCATTTCTAAAGGAAAAATCCAATCGATGCGTTCGGCATCTCGTCCTGCTCCACCGGTAACTGCTCTACGAGGTCAATTAGCGCAACAATCCAGCGCAAAATCCGATATGCCTGACTTCCCTGTCTCTCACTCTGCAAGTGCAAGAGCGTCTTTGGATAAGCCACCACTTGATCTGCCTAGTAAATCACAAGACGAGGCCGATTTCATGAGGTCCCCATTCACAAGGAAAGGATATAACTACAAAGCATCATATGGAGATTTGTCTATGCAAGATTCAGATATATCTTACGTTAGCTCGGGAAGACCGAGCATCGATCGCATATTTCCTTCACTTTATGACAGTCAAGATATGGGAGGAAGAGCCACACCACCACAGATTTCAAGCAGTACAGATCTTGACTTGACTCGCAGCTTTGAGTCTCTGCAGTTGGGACGGATGTCGGTGGATATGAACTTTCCGTCTGAGTTCTCTTCGATCTCACAAGATAGTGACAGAATGTCTATCTCATCACAGTCTATGGAAGATGTAGAGGCCGAGATGCGGAGGCTGAAGCTAGAACTCAAGCAAACCATGGAAATGTACAGTACAGCCTGCAAGGAAGCTCTTACAGCAAAACAAAAGGCGGTCGAGCTACAACGCTGGAAACTAGAAGAAGAACAAAGATTAGAAGAGGCAAGATTGGCGGGGGAAGCTGCATTGGCACTAGCCGAACAAGAGAAGGCGAAGTCGAAAGCAGCAATTGAGGCAGCTGAAGCAGCTAGAAGAATTGCAGAATTGGAAGCACAGAAAAGAATGAAGGCTGAAATGAAAGCACTCAAAGAAGCTGAAGAGAAGAAAAAGGCATTTGATGCATTGGCACAAAATGATATCAGGTATAGAAAGTATACGATCGAGGAGATCGAAGAGGCAACAGAGTTCTTTTCCGAATCTCGTAGGATCGGAGAAGGAGGATATGGTCCTGTTTACAAGTGTGATCTTGATCATACTCCTGTTGCCATTAAGGTTCTACGTCCCGATGCGACTCAAGGACGATCTCAGTTTAAACAAGAGGTAGAAGTACTCAGCTGTATACGTCATCCAAACATGGTTCTCCTCCTTGGAGCTTGCCCCGAGTACGGCTGCTTGGTCTATGAGTTCATGGCTAATGGGAGCTTAGAAGACCGACTTCTGCGACGAGGAAACACGCCTCCACTTTCATGGCAACTTAGGTTTAAAATTGCAGCTGAAATTGGAACAGCATTGTTGTTCTTGCACCAAACAAAGCCAGAGCCTCTTGTGCATCGCGATCTCAAACCAGCTAACATTCTGCTCGATCGTAACTTTGTTAGTAAGATTAGTGATGTTGGCTTGGCTAGGCTTGTACCGCCATCCATTGCCGATAGCGTAACACAATATCGAATGACATCAACTGCTGGAACATTTTGCTACATTGATCCAGAGTATCAACAAACAGGTATGCTTGGTGTGAAATCCGACATATACTCGCTAGGCATCATGTTTCTCCAACTTATAACTTCTAGGCCGCCAATGGGATTAACTCACCATGTCGAAAGAGCTATCGAGAAGGGAACGTTCGAAAATATTCTCGATCCAGCTGTACCTGATTGGCCTATTGAAGAAGCTTTGTCTTTCGCCAAGTTGTCACTCACGTGCGCCGAGTTAAGACGTAAAGATAGGCCAGATCTTGGGAAGGTCATCCTTCCAGAGCTTAACAGGTTGAGAATTATTGCAGAAGAAACAATGCATCCAACATTGATGGGAGATATAAGCCCTTCTCGCGGCAGCAGTCAAGTTTCTTTTCAGTTGGGAGCAATGGCTTCATCTCCTCAATCATACAACAGCTCGAGAAATCCATCGGCTAATTTTTGA 2328 44.16 MWLPRYSLERKERLNVNGFVAVAIDKDKGSQGALKWAIDHLLQRGHTIFLIHVKLRSPSNSSQKMSLKSDSEASVRELFLPFRCFCTRKDIQCKDVVLEDTDVAKAIIEYAANTAIENIVVGASAKSGFLRFKATDVPGSVVKGAPDFCNVFVISKGKIQSMRSASRPAPPVTALRGQLAQQSSAKSDMPDFPVSHSASARASLDKPPLDLPSKSQDEADFMRSPFTRKGYNYKASYGDLSMQDSDISYVSSGRPSIDRIFPSLYDSQDMGGRATPPQISSSTDLDLTRSFESLQLGRMSVDMNFPSEFSSISQDSDRMSISSQSMEDVEAEMRRLKLELKQTMEMYSTACKEALTAKQKAVELQRWKLEEEQRLEEARLAGEAALALAEQEKAKSKAAIEAAEAARRIAELEAQKRMKAEMKALKEAEEKKKAFDALAQNDIRYRKYTIEEIEEATEFFSESRRIGEGGYGPVYKCDLDHTPVAIKVLRPDATQGRSQFKQEVEVLSCIRHPNMVLLLGACPEYGCLVYEFMANGSLEDRLLRRGNTPPLSWQLRFKIAAEIGTALLFLHQTKPEPLVHRDLKPANILLDRNFVSKISDVGLARLVPPSIADSVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIMFLQLITSRPPMGLTHHVERAIEKGTFENILDPAVPDWPIEEALSFAKLSLTCAELRRKDRPDLGKVILPELNRLRIIAEETMHPTLMGDISPSRGSSQVSFQLGAMASSPQSYNSSRNPSANF 775
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 38896352 38900887 + CePI673135_05g028720.1 Cec05g2872 204675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g2872 775 ProSiteProfiles Protein kinase domain profile. 460 738 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g2872 775 MobiDBLite consensus disorder prediction 176 190 - -
Cec05g2872 775 SUPERFAMILY Protein kinase-like (PK-like) 443 718 IPR011009 -
Cec05g2872 775 PANTHER OS02G0152300 PROTEIN 20 745 IPR051348 -
Cec05g2872 775 SMART serkin_6 460 720 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g2872 775 Pfam Universal stress protein family 20 146 IPR006016 -
Cec05g2872 775 Pfam Protein kinase domain 461 712 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec05g2872 775 Coils Coil 352 372 - -
Cec05g2872 775 Gene3D HUPs 20 154 IPR014729 -
Cec05g2872 775 MobiDBLite consensus disorder prediction 756 775 - -
Cec05g2872 775 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 432 532 - -
Cec05g2872 775 CDD STK_N 20 157 - -
Cec05g2872 775 FunFam U-box domain-containing protein 51 533 733 - -
Cec05g2872 775 Gene3D Transferase(Phosphotransferase) domain 1 533 735 - -
Cec05g2872 775 Coils Coil 319 346 - -
Cec05g2872 775 ProSitePatterns Serine/Threonine protein kinases active-site signature. 578 590 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec05g2872 775 Gene3D Phosphorylase Kinase; domain 1 438 532 - -
Cec05g2872 775 MobiDBLite consensus disorder prediction 164 222 - -
Cec05g2872 775 Coils Coil 386 438 - -
Cec05g2872 775 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 20 154 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0468 Cec-Chr2:4360495 Cec05g2872 Cec-Chr5:38896352 2.10E-242 dispersed
Cec05g2872 Cec-Chr5:38896352 Cec08g1293 Cec-Chr8:24916312 8.80E-295 dispersed
Cec05g2872 Cec-Chr5:38896352 Cec08g1030 Cec-Chr8:22233607 9.10E-207 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72050 PF00069 Pkinase 8.60E-39 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g2872 - - - 0.0