Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g2875 ATGGCGCCGGGATTGGGGTTTTTATGTCGGTGGGGTAAAGAGAAAGACTCTCAAAAGGGAACTCCGGTGGTTGTGACGATGGAGAAACCTAATTTCTCCGTCGTGGAGATCGACGGTCCCGACGCTGTATTCCGGCCGGTGGAGAAAAGTAGAGGCAAAAATGCTAAACAGGTCACGTGGGTTCTTCTTCTGAAGGCCAATCGAGCCGTCGGTTGCATAACTTGGCTTGTAACTGTTCTCTGGGCATTGTTGGGAACAATTAAGAAGAGGCTGATCTACAGGCAAGGAGTCGCCATTGAAGGGGGGAAGTTGGGAAGAGGGAAGTTATTGTTTGGAGTTATTAGAGTTTTCTTAGTAGCTTCCATTGCGATTCTTGCTTTTGAAATTCTTGCTTATTTCAAAGGCTGGCATTATTTTCAGAATTCCAATCTGCATATTCCTCAAGCTTCTGAGTTGCAAGGATTGCTTCATTCATTCTATGTTGCTTGGTTAACTTTTAGAGCAGAGTACATTGCACCCCTCATCCAAACACTCTCTAAATTTTGCATTCTTCTGTTCCTTATCCAATCTGTGGATCGTATGATCCTTTGTCTTGGTTGCCTGTGGATAAAGTACAAAAGAATTGAGCCCAAGATTGAAGGGGATCCCTTCAAGTTGGATGATGAGGAGGGAGCTGGGCACAAGTATCCAATGGTTCTTGTTCAAATTCCCATGTGCAACGAGCGTGAGGTTTATGAGCAGTCTATCTCTGCAGTCTGTCAGATTGATTGGCCAAGGGGCCATTTACTAATTCAAGTTCTTGATGATTCTGATGATGAGAGCATCCAACTGCTAATTAAGGCAGAGGTCGCTAAATGGAGCCAAAAGGGGGTAAACATAGTGTATCGCCATCGATTAGTAAGGACAGGATATAAAGCTGGGAATCTCAAGTCTGCAATGAGTTGTGATTATGTTAGAGACTATGAGTTTGTAGCAATTTTTGATGCTGACTTTCAACCTAATCCAGATTTTCTTAAATTGACCATTCCCCATTTCAAGGATAACCCGGAGCTAGGTTTGGTTCAGGCCAGATGGTCTTTTGTGAACCGGGATGAAAATTTGTTGACACGCCTTCAAAATATTAATTTGTGTTTCCACTTTGAGGTAGAACAGCAGGTTAATGGGGTGTTCCTTAATTTCTTTGGTTTCAATGGCACTGCTGGTGTTTGGAGGATTAAAGCCCTGGAGGAGTCTGGAGGGTGGCTTGAAAGAACCACAGTAGAGGATATGGACATAGCTGTGAGAGCCCATCTTAACGGCTGGAAATTTGTATTTCTAAACGACGTTAAGGTCCTTTGTGAGGTTCCTGAGTCCTATGAAGCTTATAGGAAGCAGCAACATCGTTGGCATTCTGGTCCTATGCAACTATTCAGGTTGTGTCTTCCAGCAGTCATAAGTTCTAAGATATCAACATGGAAGAAGGCAAATTTGATACTTTTGTTCTTTCTATTAAGGAAGCTTATCCTTCCATTCTATTCCTTCACTTTGTTCTGCATAATTCTTCCTCTAACCATGTTTGTTCCAGAAGCCGAGCTTCCTGTATGGGTGATCTGTTATGTGCCTGTCTTCATGTCATTACTAAACATTCTTCCATCCCCAAAATCTTTTCCTTTTATTGTCCCTTACCTTCTTTTTGAGAACACTATGTCTGTCACCAAATTCAATGCCATGGTATCTGGCTTATTCCAGTTAGGTAGCTCTTATGAGTGGATTGTGACCAAAAAGGCTGGCAGGTCCTCCGAATCCGACTTACTGGCTGCTGCTGAAAGGGACTCCAAGACAATGAATCAAGTGTCGATCTGTAGAGGTGCGTCAGAGAGTGAGATTTCTGAGTTGGCTCACTTAAAGGAACGCAAAGAAGTTGTCTCTGCGCCTGTCAAAAAAGTTAACAAGATATATCGGAAAGAGCTAGCACTCGCGTTTCTTTTACTGTTAGCCTCACTCAGGAGTCTCTTGGCTGCACAAGGAGTCCACTTCTACTTCTTGATGTTCCAAGGTGTGACCTTCCTTCTTGTAGGCCTTGATCTAATTGGAGAGCAAATGAGCTGA 2088 43.25 MAPGLGFLCRWGKEKDSQKGTPVVVTMEKPNFSVVEIDGPDAVFRPVEKSRGKNAKQVTWVLLLKANRAVGCITWLVTVLWALLGTIKKRLIYRQGVAIEGGKLGRGKLLFGVIRVFLVASIAILAFEILAYFKGWHYFQNSNLHIPQASELQGLLHSFYVAWLTFRAEYIAPLIQTLSKFCILLFLIQSVDRMILCLGCLWIKYKRIEPKIEGDPFKLDDEEGAGHKYPMVLVQIPMCNEREVYEQSISAVCQIDWPRGHLLIQVLDDSDDESIQLLIKAEVAKWSQKGVNIVYRHRLVRTGYKAGNLKSAMSCDYVRDYEFVAIFDADFQPNPDFLKLTIPHFKDNPELGLVQARWSFVNRDENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFVFLNDVKVLCEVPESYEAYRKQQHRWHSGPMQLFRLCLPAVISSKISTWKKANLILLFFLLRKLILPFYSFTLFCIILPLTMFVPEAELPVWVICYVPVFMSLLNILPSPKSFPFIVPYLLFENTMSVTKFNAMVSGLFQLGSSYEWIVTKKAGRSSESDLLAAAERDSKTMNQVSICRGASESEISELAHLKERKEVVSAPVKKVNKIYRKELALAFLLLLASLRSLLAAQGVHFYFLMFQGVTFLLVGLDLIGEQMS 695
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 38938389 38941196 + CePI673135_05g028750.1 Cec05g2875 204678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g2875 695 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 156 694 - GO:0005794(PANTHER)|GO:0016757(PANTHER)
Cec05g2875 695 Pfam Glycosyl transferase family group 2 324 535 IPR001173 -
Cec05g2875 695 SUPERFAMILY Nucleotide-diphospho-sugar transferases 229 531 IPR029044 -
Cec05g2875 695 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 221 449 IPR029044 -
Cec05g2875 695 FunFam probable xyloglucan glycosyltransferase 5 223 448 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g1124 Cec-Chr4:30809896 Cec05g2875 Cec-Chr5:38938389 6.90E-113 dispersed
Cec05g2875 Cec-Chr5:38938389 Cec09g1990 Cec-Chr9:36938183 9.10E-267 dispersed
Cec05g2875 Cec-Chr5:38938389 Cec10g1960 Cec-Chr10:34395370 3.40E-112 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g2875 - - - 0.0