Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g2887 ATGGCGCCCTCCTTTGATTGGTGGGGAAAAGACACTCATAGAGGAACCCCTGTTGTTGTCAAGATGGAGAATCCTAATTGGTCGATGGTTGAGTTGGAGGGTCCGTCGGAGGATGATTTTCTCATCGCTGGTGAGTCGTCGCCGACGGGTCGGACCAGAGATAAAGGCAGAGGCAAAAACGCTAAGCAACTCACGTGGGTTCTCCTCCTCAAAGCCCACAGGGCCGCTGGTTGTTTAACTTCCATTGGCTCTGCAATGGTGGACCTCGCCGCCGCCGTTAGACGCCGTGTTGCTTCTGGACGGACTGATGAGGACGACGCCGACAATGACGTCACTGTTGGAGGTAGAGAGAAAGAGAACCCGACTGTGAAAACCAGGTTCTATTCTTGTATCAAGGTGTTTCTATGGCTGTCGGTGCTTCTGTTGGGTTTTGAGATTGCGGCCTTCTTCAAGGGCTGGCATTTTGGTACTCCAAATCTTCAATTGGCTTACCTTTGGGCGTCGCCTTGGGGTTTCAAAGGAGCTTTTGGTTGGATTTACTCTCAGTGGGTATTGATTCGAGTGGACTATTTAGCTCCACCTCTACAGTTCTTAGCCAATGCCTGTATCATACTGTTCATCATTCAGAGCTTGGATCGTTTAATCTTATGTTTGGGTTGTTTCTGGATCCGGTTCAAGAAAATCCAACCAGTTCTTAAACCTGGAGATGAAGAAGACCTTGAATCCGGTGAAAAGGGCTATTTCCCAATGGTTCTTGTTCAGATCCCCATGTGCAATGAAAAAGAGGTTTATCAGCAATCAATTGCTGCTATCTGCAACTTGGACTGGCCAAGAACTAAGCTGCTGATTCAAGTTCTTGATGATTCTGATGATCCAACTACCCAGTTGTTGATTAAAGAGGAGGTTCTTAAATGGCAGCAAGAGGGTGCCAACATTATTTATCGTCATCGGGTCATTAGAGATGGTTATAAGGCTGGCAACCTCAAATCCGCCATGAATTGTAGCTATGTCAAAGATTACGAATTCGTTGCCATTTTTGATGCCGATTTTCAACCCACACCTGATTTCCTTAAAAGAACTGTTCCGCATTTCAAGGACAATGAAGAGCTGGGGCTGGTTCAAGCTAGGTGGTCTTTTGTGAACAGGGATGAGAACTTGCTAACTAGGCTGCAGAACATCAATTTAGCTTTCCATTTTGAAGTAGAGCAGCAAGTGAACAGTGTCTTCCTCAACTTCTTTGGATTCAATGGCACTGCTGGTGTGTGGAGGATCAAAGCTCTCGAGGATGCCGGTGGGTGGTTAGAAAGGACCACCGTCGAGGACATGGATATCGCTGTTCGTGCTCATCTTCATGGATGGAAATTCATATTCCTAAATGATGTTGAGTGCCAGTGTGAGCTACCAGAATCTTATGAAGCTTATAGAAAACAACAACATAGATGGCATTCTGGCCCAATGCAATTGTTTCGCCTTTGTTTGCCTGCTATTATTCGATCGAAGATTAGTGTATGGAAGAAGTTCAACTTGATCTTCCTCTTCTTTTTGCTCAGAAAATTGATACTGCCCTTCTATTCCTTCACACTTTTCTGCATAATTCTACCTATGACAATGTTTGTTCCCGAGGCCGAGCTACCCGCTTGGGTCGTTTGCTATATCCCGGCCACCATGTCATTTCTAAACATCCTGCCTGCCCCAAAATCCTTCCCTTTCATTGTCCCTTACCTCCTTTTTGAGAACACCATGTCAGTCACCAAGTTCAATGCCATGATCTCAGGCCTCTTCCAGCTTGGTAGTGCCTACGAATGGGTTGTTACAAAGAAATCTGGCCGTTCCTCGGAGGGCGATCTTGTCTCCTTGGTAGAGAGAGAGCAAAAGCATCAGAGAGGAGCTTCAGCGCCCGACCTAGAAGAAATGAAGGAAGAAATTCAGAAGCAAGAGAAGAAAGCTTCTTTGCGAAAGAAGCACAACAGAATATACACGAAAGAGCTGGCATTAGCTTTCCTCCTCCTAACCGCATCGGCACGGAGCCTTCTGTCTGCACAAGGGATCCATTTCTACTTCTTGCTATTCCAGGGGATCTCATTCCTGCTTGTCGGTTTGGACTTGATCGGCGAACAGATAGGTTGA 2127 46.26 MAPSFDWWGKDTHRGTPVVVKMENPNWSMVELEGPSEDDFLIAGESSPTGRTRDKGRGKNAKQLTWVLLLKAHRAAGCLTSIGSAMVDLAAAVRRRVASGRTDEDDADNDVTVGGREKENPTVKTRFYSCIKVFLWLSVLLLGFEIAAFFKGWHFGTPNLQLAYLWASPWGFKGAFGWIYSQWVLIRVDYLAPPLQFLANACIILFIIQSLDRLILCLGCFWIRFKKIQPVLKPGDEEDLESGEKGYFPMVLVQIPMCNEKEVYQQSIAAICNLDWPRTKLLIQVLDDSDDPTTQLLIKEEVLKWQQEGANIIYRHRVIRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPTPDFLKRTVPHFKDNEELGLVQARWSFVNRDENLLTRLQNINLAFHFEVEQQVNSVFLNFFGFNGTAGVWRIKALEDAGGWLERTTVEDMDIAVRAHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPAIIRSKISVWKKFNLIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVSLVEREQKHQRGASAPDLEEMKEEIQKQEKKASLRKKHNRIYTKELALAFLLLTASARSLLSAQGIHFYFLLFQGISFLLVGLDLIGEQIG 708
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 39018883 39021370 + CePI673135_05g028870.1 Cec05g2887 204690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g2887 708 Coils Coil 635 655 - -
Cec05g2887 708 FunFam probable xyloglucan glycosyltransferase 5 242 467 - -
Cec05g2887 708 Pfam Glycosyl transferase family group 2 343 549 IPR001173 -
Cec05g2887 708 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 241 466 IPR029044 -
Cec05g2887 708 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 177 706 - GO:0005794(PANTHER)|GO:0016757(PANTHER)
Cec05g2887 708 SUPERFAMILY Nucleotide-diphospho-sugar transferases 251 528 IPR029044 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g2887 Cec-Chr5:39018883 Cec08g1735 Cec-Chr8:28463545 0.00E+00 dispersed
Cec05g2887 Cec-Chr5:39018883 Cec02g2297 Cec-Chr2:40286496 4.00E-116 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g2887 - - - 0.0