Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g2900 ATGGCCACTCCCCTTTTCCGGTCGTCGGTTTTCTTGGCTGTTTTTGTTTCTCAGGTGGTCTTCTCCGCCTCCGCCTCATCCTGGACAGTCAAATATCTGCCTGGATTCTCAGGTCCTCTTCCGTTTGAACTTGAAACTGGGTATGTGGGAGTGGGGGATTCGGAGGAAGTTCAGTTGTTTTATTACTTTGTCAAATCCCAAGGAAATCCCCAAACCGATCCTCTAATGACTTGGTTGGCCGGCGGCCCTGGTTGCTCTGCTTTCTCTGGTCTCGCCTTTGAAATTGGTCCTATAAATTTCAAGGTAGAGCCATACAATGGAACCGTACCTCAACTAATCTTGAATCCTGATGCATGGACTAAGAAAGCTAGTATTCTATTTATAGATTCGCCTGTTGGCACTGGATTTTCATATAGTCGAACTCTACGAGGCTCCAAGAGAGGAGATCTTTTACAAGTAGAACAAATTCATCAATTTTTAAGAAAGTGGCTCGCAAACCACCCAGAATTTATATCTAATCCATTTTACGTTGGTGGAGACTCTTACTCTGGTATGATTGTTCCACCTGTTACTAAAGCAATTTCAGAAGGAAACAAACACGAAGTCCCACATATAAACCTCCAGGGATACATCGTGGGAAATCCAGTCAGCGTACGTAAAACAAACGATAATTCTAGGATTCCTTATGCTTATAGATTGACGCTCATCTCTACAGAATTGTATGAGTCATTAACAAATAGTTGCAAGGGAGAATATGAAAATGTTGATCCAAATAACGAGGAGTGCGCCAATCATTTATCAGCCTTCAAAAAGTGTGTGGGTAGAATCAATTATTGGTGTATTTCTTGCCCTTATTGTGAGGATGTATCTTCGGCGCCACAAGATAAGTTTGGACGGCGAAGATCTCTCTACAACACCTCCCAGGAACTGCTTCTTGCTACGAGAGTGTTACCTCCTCCTTCTCTTGACTGTCAAGAATATAAGTACTACCTTAGTTACTATTGGGCAAACGATGACCAAGTTCAAAAAGCACTTCACATACGGGAGGGAACTATTGAAGAATGGATAAGATGCCAGAATCGTAAAAGTTACGAATATGATATTATGAGTGTTGTTCCTTATCATGCAAATCTTAGTTTTAAAGGTTATCGATCTTTGGTTTTTAGTGGGGATCATGATCTGATGGTGCCGGTCATAGACACTGAAGCATGGATCAGGTCCCTAAGTTATCCTATTGTCGATGATTGGAGACCTTGGTTTAACACGGAAGATCAAATACTTGGATACACAAGAACGTATGCAAATAACATGACATTTGCGACCATTAAAGGTGGAGGGCACACACCAGAATTCATGCAAACTCAAAGTCGCGTAATGTTTTATAGATGGATACAAGGAGAATCTTTATGA 1410 41.49 MATPLFRSSVFLAVFVSQVVFSASASSWTVKYLPGFSGPLPFELETGYVGVGDSEEVQLFYYFVKSQGNPQTDPLMTWLAGGPGCSAFSGLAFEIGPINFKVEPYNGTVPQLILNPDAWTKKASILFIDSPVGTGFSYSRTLRGSKRGDLLQVEQIHQFLRKWLANHPEFISNPFYVGGDSYSGMIVPPVTKAISEGNKHEVPHINLQGYIVGNPVSVRKTNDNSRIPYAYRLTLISTELYESLTNSCKGEYENVDPNNEECANHLSAFKKCVGRINYWCISCPYCEDVSSAPQDKFGRRRSLYNTSQELLLATRVLPPPSLDCQEYKYYLSYYWANDDQVQKALHIREGTIEEWIRCQNRKSYEYDIMSVVPYHANLSFKGYRSLVFSGDHDLMVPVIDTEAWIRSLSYPIVDDWRPWFNTEDQILGYTRTYANNMTFATIKGGGHTPEFMQTQSRVMFYRWIQGESL 469
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 39118464 39122024 + CePI673135_05g029000.1 Cec05g2900 204703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g2900 469 Gene3D alpha/beta hydrolase 23 297 IPR029058 -
Cec05g2900 469 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 26 463 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)|GO:0016747(PANTHER)|GO:0019748(PANTHER)
Cec05g2900 469 Pfam Serine carboxypeptidase 34 466 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cec05g2900 469 SUPERFAMILY alpha/beta-Hydrolases 29 467 IPR029058 -
Cec05g2900 469 FunFam Serine carboxypeptidase-like 11 24 469 - -
Cec05g2900 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 163 188 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cec05g2900 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 115 127 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cec05g2900 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 138 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cec05g2900 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 437 450 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cec05g2900 469 FunFam Carboxypeptidase 323 468 - -
Cec05g2900 469 Gene3D - 322 469 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g0442 Cec-Chr4:16843990 Cec05g2900 Cec-Chr5:39118464 1.50E-41 dispersed
Cec04g0443 Cec-Chr4:16874110 Cec05g2900 Cec-Chr5:39118464 1.50E-35 dispersed
Cec05g2900 Cec-Chr5:39118464 Cec09g0769 Cec-Chr9:7019528 8.20E-94 dispersed
Cec05g2900 Cec-Chr5:39118464 Cec05g2901 Cec-Chr5:39125237 5.80E-148 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g2900 K16296 - csv:101210918 544.273