Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g2901 ATGGCCACCTTCGCCACCGTCCTTTTCCGATGCTCTGTTTTCCTCCTCCTACTTTTTCAGTTTTTCTCCGCCGCTGCCGCCACCGGAGGATCATACTCGAGGGTGAAGTATCTGCCGGGATTCTCAGGACCTCTTCCCTTCCAACTAGAAACTGGATACGTTGGTGTGGGAGATTCAGATCAATTTCAGATTTTTCACTATTTTATCAAATCTGAAGCAAATCCCAAAACGGATCCTCTCATTATTTGGCTAACCGGAGGTCCCGGTTGCTCTGCCCTCTCCGGACTTGCCTTTGAAATTGGTCCTATAAGTTTTGATGAAGAATCAAACGAAGGGAGCATTCCTCGATTAATCTTAAATCCCTATTCATGGACGAAGAAATGTAGCATAATATTTGTAGATTTACCTGCGGGGACTGGATTTTCATATGATACAACTTCGTCTACCTTTAAACCGGGAGATTTTAATCAAATTCACCACTATCTTCAATTTTTGAGAAAGTGGTTTGTTGATCATCCAGAGTTTACAAAAAATCCATTCTATATTGGCGGAGATTCATACTCTGGGATGATTGTTCCCGTAGTTGCTCAAAAAATTGTAGAAGGCGACAATTTTGCAATTCCTTTTGCTCATAGGATGACTCTTATATCTGATGAATTATTTGAGTCATTGAAAACTAGTTGTAGAGGAAAATATGTGAACATTGATCCAAGCAATGTGGAGTGTTTAAGACATTACGAGACGTATAAAAAGTGTATATCGAAAGTCGAGCCTGCAAATATTTTGGATCCAAAGTGTCAATTTCAGTCTCCAAAGCAACAAGATGTATATGATCGAAGATCTCTCAATAGCATCTCAAAGTCGTTGTTTGATCAAAGCACACCACTCTCCTTTCGTAGTTGTCCTGAGTTTAAATACAAACTTTCTAATGATTGGGCTAACGCGGATCAAGTTCGGAAGGCACTTCACATTCGTGAGGGAAGTATTGGAGAATGGATAAGATGTAAGAACAAAAAAGAAATGTATATTTTTGAACTTGATACTGTTTTCCATTATCATGTGAACCTTAGTTCTAAAGGGTATCGATCTTTGATCTATAGTGGCGATCATGATATGTTAGTGCCCCATTTGGACACTCAGGCATGGATCAAAGCTTTAAACTACTCCATTGTTGATGATTGGAGACCATGGTTTATCTTGGATCAAGTAGCCGGATATACCCGATACTATGCAAATAAGATGACATTTGCAACTATAAAAGGTGGAGGGCACACAGCAGAATACACAAAAAGAGAATGCAGCATAATGTTTAGCAGATGGATATCAGGACAATCCTTATGA 1341 39.45 MATFATVLFRCSVFLLLLFQFFSAAAATGGSYSRVKYLPGFSGPLPFQLETGYVGVGDSDQFQIFHYFIKSEANPKTDPLIIWLTGGPGCSALSGLAFEIGPISFDEESNEGSIPRLILNPYSWTKKCSIIFVDLPAGTGFSYDTTSSTFKPGDFNQIHHYLQFLRKWFVDHPEFTKNPFYIGGDSYSGMIVPVVAQKIVEGDNFAIPFAHRMTLISDELFESLKTSCRGKYVNIDPSNVECLRHYETYKKCISKVEPANILDPKCQFQSPKQQDVYDRRSLNSISKSLFDQSTPLSFRSCPEFKYKLSNDWANADQVRKALHIREGSIGEWIRCKNKKEMYIFELDTVFHYHVNLSSKGYRSLIYSGDHDMLVPHLDTQAWIKALNYSIVDDWRPWFILDQVAGYTRYYANKMTFATIKGGGHTAEYTKRECSIMFSRWISGQSL 446
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 39125237 39128008 + CePI673135_05g029010.1 Cec05g2901 204704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g2901 446 PRINTS Carboxypeptidase C serine protease (S10) family signature 133 143 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cec05g2901 446 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 193 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cec05g2901 446 PRINTS Carboxypeptidase C serine protease (S10) family signature 414 427 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cec05g2901 446 PRINTS Carboxypeptidase C serine protease (S10) family signature 120 132 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cec05g2901 446 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 34 440 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)|GO:0016747(PANTHER)|GO:0019748(PANTHER)
Cec05g2901 446 Pfam Serine carboxypeptidase 204 443 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cec05g2901 446 Pfam Serine carboxypeptidase 39 203 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Cec05g2901 446 SUPERFAMILY alpha/beta-Hydrolases 35 445 IPR029058 -
Cec05g2901 446 Gene3D - 301 446 - -
Cec05g2901 446 Gene3D alpha/beta hydrolase 31 277 IPR029058 -
Cec05g2901 446 FunFam Carboxypeptidase 300 445 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g2289 Cec-Chr5:34210700 Cec05g2901 Cec-Chr5:39125237 9.00E-170 dispersed
Cec05g2290 Cec-Chr5:34219729 Cec05g2901 Cec-Chr5:39125237 1.30E-181 dispersed
Cec05g2291 Cec-Chr5:34231429 Cec05g2901 Cec-Chr5:39125237 5.40E-10 dispersed
Cec05g2901 Cec-Chr5:39125237 Cec09g0769 Cec-Chr9:7019528 3.20E-87 dispersed
Cec05g2900 Cec-Chr5:39118464 Cec05g2901 Cec-Chr5:39125237 5.80E-148 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g2901 K16296 - csv:101207623 549.28