Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec05g2913 ATGGCCCTTCTCTCTGCTGAGCCTCGATTTCATGTCTTGGCTGTTGATGACAGCCTTGTTGATAGGAAGCTCATTGAAAGGCTCCTCAAAACTTCCTCCTTCAATGTTACTGCTGTGGATTCTGGAAGCAAAGCTTTGGAGCTTCTGGGCTTGGTTAGAGAAAGAAATGGAAGCACGCATTCTCCTATTTCCCCTGAAAATCATCATCATCATCATCATCATCATCATCATCAAGAGATTGAAGTTAATCTCATCATTACAGATTACTGTATGCCAGAAATGACAGGCTATGATCTTCTCAGAAAGATCAAGGAATCTGACTCACTTAAAGACATTCCTGTTGTGATTATGTCCTCTGAGAATGTTCCATCAAGAATCAACAGATGTTTGGAAGAAGGAGCTGAGGAGTTTTTGCTAAAACCAGTGAAATTATCTGATGTCAATAAGCTTAAGCCTTTCATATCTAGAGGTAAAGCCAAGGAAATGGATTTCAACAACCTCAAGAGAAAGGAAATGGAAAAGAGCCAATCATCTGAGAGAACAAGAACAAAATACAATGAATTTTTCTGA 570 39.3 MALLSAEPRFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGLVRERNGSTHSPISPENHHHHHHHHHHQEIEVNLIITDYCMPEMTGYDLLRKIKESDSLKDIPVVIMSSENVPSRINRCLEEGAEEFLLKPVKLSDVNKLKPFISRGKAKEMDFNNLKRKEMEKSQSSERTRTKYNEFF 189
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 39237960 39239464 - CePI673135_05g029130.1 Cec05g2913 204716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec05g2913 189 Gene3D - 11 186 - -
Cec05g2913 189 ProSiteProfiles Response regulatory domain profile. 11 155 IPR001789 GO:0000160(InterPro)
Cec05g2913 189 MobiDBLite consensus disorder prediction 57 77 - -
Cec05g2913 189 SUPERFAMILY CheY-like 9 147 IPR011006 -
Cec05g2913 189 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 179 IPR045279 GO:0009736(InterPro)
Cec05g2913 189 Pfam Response regulator receiver domain 76 147 IPR001789 GO:0000160(InterPro)
Cec05g2913 189 SMART REC_2 10 151 IPR001789 GO:0000160(InterPro)
Cec05g2913 189 CDD REC_typeA_ARR 12 150 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0759 Cec-Chr1:8308253 Cec05g2913 Cec-Chr5:39237960 5.80E-52 dispersed
Cec05g2725 Cec-Chr5:37768331 Cec05g2913 Cec-Chr5:39237960 5.40E-38 dispersed
Cec05g2913 Cec-Chr5:39237960 Cec10g1628 Cec-Chr10:30724162 3.20E-49 dispersed
Cec05g2913 Cec-Chr5:39237960 Cec06g1863 Cec-Chr6:31985770 1.90E-41 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29697 PF00072 Response_reg 6.20E-16 CL0304 Cec TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec05g2913 K14492 - csv:101207245 284.648