Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g0019 ATGGCCGATATTCAGAAACAAGAACTCGACGACGACGACGACTCTCCGCCCACCCATCTCCCTATCAATGACTCTGACTCCTCTCGAATCGACCTTCTTTCCCTTCCTCCTAAGCAGGAGCATCCCGATTCCGACGACTCCAACCTCCCCCCCTCCGGAATTCAGCTCCTCAAGTTCACTGCAGACATTGCTAAATCTGTCTCATCTCTCCCGCCCAAGAGAGCGTCTACCAAGGATCGCCACACCAAGGTCGAGGGCAGAGGCCGGAGAATCCGAATTCCGGCCACCTGTGCCGCGCGTATCTTCCAGTTGACTCGAGAGCTCGGCCACAAGTCCGACGGCGAAACTATTCGGTGGCTTCTGGAGCGGGCCGAGCCGGCTATCATCGCCGCTACTGGGACTGGTACCATTCCCGCTATCGCCATGTCTGTTAATGGCACTCTCAAAATCCCCACCACCACTTCCTCTTCTAACCAAGATTCTGCCGATCCATCCGCGGCTAAGAAGCGGCGTAAGCGCCCCGCTAACAGTGACTACGTTGACGTAAACGACGCCCTCTCCGTCTCCGTCTCCGCCTCGAACGGCGTCGTTCAGGCCGGTACCGTCGCCGGTTCCCCCGCCGTCCAACAGGCTTTTCCACCGGGGTTCGTTCCAGTGTGGGCCATCCCATCCAACGCCATAATTCCCGGGGCGGTTTTCATGGTACCATCCGTGGCATGTTCTTCCACCCGTCCACAGTTGTTCTCATTTCCGGCTCCGGCGGCGCCGCTCATCAACACGTCGGCGCGGGCCATTTCTACCTTCCCGTCGAAGCCAGACACGTCTCACATTCAATCCAACCCCACCAATCAAAGCTCCAGCACTTCAAGCTCCTCCGCTTCCAAGTCTCAATCTGTCATGGCGCCGATCTCGAGCTCTACCGTTACAACGTCCGGCAAAACGACGACGCAGATGCTTAGAGACTTCTCGTTGGAGATATACGATAAGGAAGAGCGTCAATTCATGTCTCGCTCGTCCTCAAAACATTGA 1029 56.95 MADIQKQELDDDDDSPPTHLPINDSDSSRIDLLSLPPKQEHPDSDDSNLPPSGIQLLKFTADIAKSVSSLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSNQDSADPSAAKKRRKRPANSDYVDVNDALSVSVSASNGVVQAGTVAGSPAVQQAFPPGFVPVWAIPSNAIIPGAVFMVPSVACSSTRPQLFSFPAPAAPLINTSARAISTFPSKPDTSHIQSNPTNQSSSTSSSSASKSQSVMAPISSSTVTTSGKTTTQMLRDFSLEIYDKEERQFMSRSSSKH 342
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 230762 231790 + CePI673135_06g000190.1 Cec06g0019 204756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g0019 342 MobiDBLite consensus disorder prediction 151 178 - -
Cec06g0019 342 MobiDBLite consensus disorder prediction 1 52 - -
Cec06g0019 342 MobiDBLite consensus disorder prediction 164 178 - -
Cec06g0019 342 Pfam TCP family transcription factor 76 172 IPR017887 -
Cec06g0019 342 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 53 294 IPR005333 GO:0003700(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0043565(PANTHER)
Cec06g0019 342 MobiDBLite consensus disorder prediction 266 315 - -
Cec06g0019 342 ProSiteProfiles TCP domain profile. 77 131 IPR017887 -
Cec06g0019 342 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g2670 Cec-Chr5:37290645 Cec06g0019 Cec-Chr6:230762 5.90E-28 dispersed
Cec06g0019 Cec-Chr6:230762 Cec06g1822 Cec-Chr6:31656827 6.70E-29 dispersed
Cec05g0929 Cec-Chr5:8120359 Cec06g0019 Cec-Chr6:230762 6.50E-48 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29705 PF03634 TCP 5.90E-30 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g0019 - - - 0.0