Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec06g0035 | ATGGATGGAATTACACCCCACAATCGCCCTCTTCCTCCTCCTTTCCTTTCCAAAGATCTCCATCTCCACCATGGATTATTCCACCACCACCAAAACTCCGACGACGACCAAACCGCCGGAGCTAAGAGAGATAGAGAGGACGAAAACCCCACCACGGCGGCGATGGCGGACAGCAAAGAATTATCTAATTCTTCATCTCGACGCCCACGTGGCCGACCAGCTGGTTCCAAAAACAAGCCAAAGCCACCCATTATAATTACTAGAGACAGCGCTAACGCCCTCAGATCTCATCTCATCGAAATCTCCACTGCCTCCGACATCGTCGATTCCCTCGCTGCCTTCGCACGCCGCCGCCAGCGTGGCGTTTGTATTCTAAGTGCCACGGGTACCGTCGCCAACGTCACTCTCCGGCAGCCGGCCTCCCCCGGCGCTGTCATCACCTTACATGGGAGATTTGAAATTCTCTCCCTCTCCGGCTCTTTCCTCCCACCGCCGGCTCCCCCGGCCGCCTCTGGTCTGACCGTCTACTTGGCTGGCGGGCAGGGGCAGGTCGTAGGTGGAAATGTAATCGGCCCACTTTCGGCGTCCGGTCCGGTGATTATCATGGCGGCTTCTTTTGGTAATGCTGCGTATGAACGGCTACCCATAGATGACGACGACGAAACGTCACCGGCAGCAGAGATTGCCGGACAACAAGCAGCACCGCCGCCGCCACAATTGATGGGGGATCCTAATGGGGGATTGTTTCATGGGATGGCGCAGAATGTTGTGAATTCTTCATGCCAATTGCCGGCAGAGGCGGCTGCGGCGTTTTGGGGAGGAGGTCGGCCACCGTATTGA | 840 | 56.9 | MDGITPHNRPLPPPFLSKDLHLHHGLFHHHQNSDDDQTAGAKRDREDENPTTAAMADSKELSNSSSRRPRGRPAGSKNKPKPPIIITRDSANALRSHLIEISTASDIVDSLAAFARRRQRGVCILSATGTVANVTLRQPASPGAVITLHGRFEILSLSGSFLPPPAPPAASGLTVYLAGGQGQVVGGNVIGPLSASGPVIIMAASFGNAAYERLPIDDDDETSPAAEIAGQQAAPPPPQLMGDPNGGLFHGMAQNVVNSSCQLPAEAAAAFWGGGRPPY | 279 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 362714 | 363553 | - | CePI673135_06g000350.1 | Cec06g0035 | 204772 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec06g0035 | 279 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 34 | 240 | IPR014476 | GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0010228(PANTHER) | |
Cec06g0035 | 279 | MobiDBLite | consensus disorder prediction | 55 | 71 | - | - | |
Cec06g0035 | 279 | FunFam | AT-hook motif nuclear-localized protein | 94 | 221 | - | - | |
Cec06g0035 | 279 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 95 | 206 | IPR005175 | - | |
Cec06g0035 | 279 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 91 | 218 | - | - | |
Cec06g0035 | 279 | CDD | DUF296 | 95 | 206 | IPR005175 | - | |
Cec06g0035 | 279 | ProSiteProfiles | PPC domain profile profile. | 91 | 231 | IPR005175 | - | |
Cec06g0035 | 279 | Gene3D | - | 94 | 224 | - | - | |
Cec06g0035 | 279 | MobiDBLite | consensus disorder prediction | 216 | 244 | - | - | |
Cec06g0035 | 279 | MobiDBLite | consensus disorder prediction | 28 | 85 | - | - | |
Cec06g0035 | 279 | MobiDBLite | consensus disorder prediction | 28 | 53 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec01g0348 | Cec-Chr1:3575333 | Cec06g0035 | Cec-Chr6:362714 | 9.40E-75 | dispersed | |
Cec06g0035 | Cec-Chr6:362714 | Cec09g1211 | Cec-Chr9:12651514 | 7.90E-60 | dispersed | |
Cec02g0333 | Cec-Chr2:3063953 | Cec06g0035 | Cec-Chr6:362714 | 2.80E-59 | transposed | |
Cec05g0251 | Cec-Chr5:2055573 | Cec06g0035 | Cec-Chr6:362714 | 6.40E-67 | wgd | |
Cec05g0895 | Cec-Chr5:7744480 | Cec06g0035 | Cec-Chr6:362714 | 2.00E-20 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec06g0035 | - | - | - | 0.0 |