Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec06g0038 | ATGAGTGCCAACCCTAGTACTAGCGGCGGCGGAGGGCCGGGAACTGCCAGCGCCGGCGGTGGCGTCGGTGGCGGCGGAGGAGGGCCATGTGGAGCTTGCAAGTTTTTGAGAAGAAAGTGTGTTCCCGGTTGCATATTTGCCCCTTATTTCGACTCCGAGCAAGGCGCAGCCCATTTCGCAGCTGTGCACAAGGTGTTCGGAGCCAGCAATGTCTCGAAGCTCCTCCTTCATATTCCGGTCCACAAACGTCTCGACGCTGTCGTCACGATTTGTTACGAGGCTCAAGCACGTCTCCGAGACCCTGTCTACGGTTGCGTCGCTCACATCTTTGCTCTTCAACAACAGGTGGTGAGTTTACAAGCCGAGCTGACTTACCTTCAAGCCCATCTAGCAACACTGGAGCTTCCGTCCCCGCCGAACCCGCCGCCGCCACCTCCGCCACCAAGTTTTCCGGCGCAACCGCCGCTTTCCATCTCAGACCTGCCGTCGGCCTCCTCCCTGCCGGCCACTTACGACTTGTCGTCCCTCTTCGATCCAATGGCTCAGCCTGCATGGGCCATGCAACAGCAGCGGCTCGACCCCCGCCAGTTCGCCGGCGGAGGTGGCGGTTCATCAACGGCGGCAGGAGAAGGCGATCTTCAAGCCCTGGCTCGCGAACTCCTCCATAGACACGGCGCTCTGCCGTGCTCCGACGCCTCGTCGCCGCAATCGCTCTCTAAATGA | 723 | 60.86 | MSANPSTSGGGGPGTASAGGGVGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPAQPPLSISDLPSASSLPATYDLSSLFDPMAQPAWAMQQQRLDPRQFAGGGGGSSTAAGEGDLQALARELLHRHGALPCSDASSPQSLSK | 240 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 382522 | 385349 | - | CePI673135_06g000380.1 | Cec06g0038 | 204775 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec06g0038 | 240 | PANTHER | LOB DOMAIN CONTAINING PROTEIN | 26 | 147 | - | GO:0005634(PANTHER)|GO:0009755(PANTHER)|GO:0045893(PANTHER) | |
Cec06g0038 | 240 | MobiDBLite | consensus disorder prediction | 135 | 155 | - | - | |
Cec06g0038 | 240 | Pfam | Lateral organ boundaries (LOB) domain | 29 | 127 | IPR004883 | - | |
Cec06g0038 | 240 | MobiDBLite | consensus disorder prediction | 185 | 219 | - | - | |
Cec06g0038 | 240 | MobiDBLite | consensus disorder prediction | 134 | 158 | - | - | |
Cec06g0038 | 240 | ProSiteProfiles | LOB domain profile. | 28 | 130 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec06g0038 | Cec-Chr6:382522 | Cec07g0122 | Cec-Chr7:1292853 | 1.30E-42 | dispersed | |
Cec06g0038 | Cec-Chr6:382522 | Cec06g0039 | Cec-Chr6:400104 | 3.90E-39 | tandem | |
Cec07g0386 | Cec-Chr7:3946450 | Cec06g0038 | Cec-Chr6:382522 | 2.40E-35 | transposed | |
Cec09g0783 | Cec-Chr9:7182849 | Cec06g0038 | Cec-Chr6:382522 | 5.00E-39 | transposed | |
Cec10g1600 | Cec-Chr10:30392734 | Cec06g0038 | Cec-Chr6:382522 | 1.60E-37 | transposed | |
Cec05g0256 | Cec-Chr5:2098141 | Cec06g0038 | Cec-Chr6:382522 | 1.60E-54 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
29708 | PF03195 | LOB | 2.70E-38 | No_clan | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec06g0038 | K21994 | - | csv:101220603 | 378.637 |