Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec06g0049 | ATGGGCCCAGTTTATCGTTACTATACGGGCTACGGCCCATTAAAGCGCATGTTAGAAAGCCTTCAGTGTCCCACATCGGAAGCCCAACCATTGCCATCAATCGTGCTGATCGTGCAAGCGGTGGAACTGCGTAGTGAGCTAAACAAAGAAACTCAGCGACACGAGGCGACGAGTAGATCTGGGCGTGTGCGAGCAGCATTGAGGATGGTCGTTGCGCGCTCCCGCATCGGCCCCAACATCCATCGCTTCGCCCAGTTGCCCTCTCCCTTCACTCCCAACCAGCATTCACCTCTTTCTTCCTCAGATCTACACTCTCCGTCGCCTTCACTCTCAGGTCCCAATTTGCTGGTTTGTAATCCATTTTGTTTCGATCTCTGTCTGGTGCCCTTCGTTCAATCTCGCAGGAGTCTTTCGCGAGTGTGTCAGAATGAAGGAAAGCTGCATGTGCTGAATTTGGGAATTTGTGATGTTGTGCTTCGTAAAGCTTTAATTGTGTTTATTGGAAGAATTTTGGCATTTCTTTCAAAAGCTAGTTTCAGAGAATCCCCCTTGAAAGAGAAGCATGGCTATGTGTTTCCTTTGAGATGGGGAGGGAAGTGGAAGCTTTTCTTTCAGAGGCCTATCTATGAAAGGGAAATTGGGGGATTAACCAACCTCATCATCCTTTTGGAGAAGCAGAAAACAAGTAACCTTTCTAATCAACAACTATGGACATTACACCTGTCTGGAATCTCACTGACAGTTTGGTCTTCCATAACGAAGAGCAGTCAAATGGATGGACCAACTGGTCGCAGTGGTGGTGGCATGGATATGAATTTACCGAACTATAAGCTTGGGAAAACCCTTGGCATTGGTTCATTTGGGAAAGTGAAAATTGCAGAGCATGCTTTAACTGGTCATAAAGTTGCTATTAAGATCCTTAACCGCCGAAAGATAAAAAACTTGGACATGGAAGAAAAAGTGAGAAGAGAGATTAAAATATTGAGACTGTTCATGCATCCGCACATTATACGGCTCTATGAGGTTATAGAGACCCCAGCAGACATTTATGTTGTGATGGAGTATGTAAAATCTGGGGAGCTCTTTGACTATATTGTAGAAAAGGGAAGGTTGCAGGAGGATGAAGCCCGTAATTTTTTCCAACAGATTATCTCTGGTGTGGAGTACTGCCACAGGAATATGGTAGTTCACAGAGATCTCAAGCCGGAGAACTTGCTTCTTGACTCCAAATGTAATGTGAAGATTGCTGATTTTGGTCTGAGCAATATAATGCGTGATGGTCACTTTCTGAAGACAAGTTGTGGGAGTCCCAATTATGCTGCCCCAGAGGTCATCTCTGGGAAATTATACGCTGGACCTGAAGTAGATGTGTGGAGTTGTGGTGTGATTTTGTATGCTCTTCTATGTGGCACTCTTCCTTTTGACGATGAAAACATTCCCAACCTGTTTAAGAAAATAAAGGGTGGAATCTATACTCTTCCAAGTCATTTATCATCTGGTGCTAGAGAACTGATTCCTAGCATGCTGGTGGTTGACCCAATGAAACGCATCACGATCCCTGAGATTCGGCAGCACCCATGGTTTCAGGCTCATCTTCCACGCTATTTAGCCGTGCCTCCACCTGATACAATGCAACAGGCAAAAAAGATTGATGAAGACATTCTTCAGGAAGTTGTAAAGATGGGATTTGACAGGAATCAGCTGGTGGAGTCTCTTCGTAACCGTATTCAAAATGAGGCTACTGTTGCTTATTATTTGTTGCTGGACAACCGGTTCCGTGTTTCTAGTGGCTATCTTGGAGCTGAGTTTCAGGAGACTATGGAAACAGGATTCAACCATATGCACCCTGGTGATCCTACAAGTCCTGCTGTAGGACACCGTCTTCCTGGGTATATGGATTACCAAGGAATGGGCTTAAGATCACAGTTTCCCGTTGAGAGGAAGTGGGCCCTGGGATTACAGTCTCGAGCTCATCCTCGTGAAATTATGACCGAAGTTCTTAAAGCCCTACGAGAGCTCAATGTGGCTTGGAAGAAGATTGGGCACTATAATATGAAATGTAGATGGTTGCCTGGAATTCCAGGCCATCATGAAGGCATGATTAACAACCCTGTGCATAGTAATCATTACTTTGGGGACGAGTCTACCATCATTGAAAACGACGGCGTTGTAAAATCGCCGAATGTTATTAAGTTTGAAGTACAGCTGTACAAAACACGCGAAGAGAAGTATTTGCTTGATCTACAGAGGGTTCAAGGCCCCCAGTTCCTTTTCCTGGATCTTTGTGCTGCTTTCCTTGCCCAGCTCCGATTGCTCCTTGGCTGTCGTTTTCTTGTCGTCAAGATTCCCAAAATCCTTTCCTCTTTGGGTACGTTGACGTGTTTTGGCAAAACAGCATTTGTCTTGTTGGAGAAGAAATTTGAAGAAAACCCTTGCTTCTTCATCTCTGATCCCTTTTACACTGCAAAGATCTTGTTCTTCCTCTCAATTTGTGAACTCGCAAAGATGACTCAAGACGCCGAGATGAAAGAGCTTCCTGCTCCATTGTCGTCTTCTTCCTCTTCAGCTTCCCCCTCAACTCTACAACATTTGAAAGAGATTGTGTCGCTCATTGAGACCGGTGCCTATGCTCGGGAGGTTCGGCGGATTGTTCGTGCCATTCGTCTGACTATGGCGTTGAGGCGGAAGTTGAAGGCTTCTGTCGTTTCTCAATTTCTGAATCTTGTTCTCCCCCCAGGGTCCGAGGTGCACACTAGGTTATCGTCATTTCTTCCAAAGGAGGATGACTGTGAAATGGATGTTGACACGGCAACACAAGCTCCTGCCAAACACCCTTTGCCCGAGATAGAGATATTTTGCTACTTGATTGTGCTAATATTTTTGATTGATCAGAAGAAATATGCTGATGCTAAAGCTTGCGCCTCCGCGAGCATTGCTCGGGTTAAGAACCTTAATAGGAGAACAGTCGATGTTTTAGCATCCAGGCTCTACTTCTATTACTCCCTCAGCTATGAACTCACTGGCGATCTTGCTGAAATAAGGGGCAACCTCCTAGCCCTGCATCGCATTGCAACCTTGCGCCATGATGAATTGGGTCAGGAAACTCTCCTTAACCTTCTACTTCGTAATTACCTCCACTACAACCTTTATGATCAAGCTGAGAAGTTGAGGTCCAAGGCACCCCGGTTTGAAGCTCACTCAAATCAGCAGTTCTGTAGGTACCTATTTTACCTTGGCAAGATCAGGACTATTCAGCTGGAGTACACAGATGCAAAGGAGTCTCTTCTACAAGCTGCTCGGAAAGCACCCATTGCAGCTCTTGGTTTTCGAGTGCAATGCAACAAATGGGCAATCATTGTTCGCTTGCTGCTAGGAGAAATCCCTGAGAGGACCGTTTTCATGCAGAAAGGCATGGAGACAGCTCTGAGGCCATACTTTGAACTTACAAATGCTGTGAGAATTGGTGACTTGGAGCTTTTCAGGACAGTTGCCGAGAAGTTCTCTGGCACTTTCAGCTCAGATCGAACTAACAACTTGATCGTGAGGCTGCGACACAATGTCATTAGGACTGGGCTTCGCAACATTAGCATTTCTTATTCACGAATTTCTCTGGTTGATGTTGCTAAAAAGCTTAGGTTGGACTCAGCAAATCCTGTTACTGATGCTGAGAGTATCGTCTCCAAGGCAATCCGAGATGGAGCAATTGATGCAACAGTCGATCATGGGAATGGATGGATGGTATCAAAGGAGACTGGTGATATTTACTCTACCAATGAACCTCAGCTTGCTTTCAACTCGAGGATTGCGTTTTGCCTGAATATGCATAATGAGGCAGTTCGTGCCCTTCGGTTTCCACCAAATTCACACAAGGAAAAAGAAAGCGCCGAGAAAAGAAGAGAAAGACAACAGCAGGAGCAAGAACTTGCAAAACACATAGCCGAAGAAGATGACGACGACTTTTAG | 3963 | 45.29 | MGPVYRYYTGYGPLKRMLESLQCPTSEAQPLPSIVLIVQAVELRSELNKETQRHEATSRSGRVRAALRMVVARSRIGPNIHRFAQLPSPFTPNQHSPLSSSDLHSPSPSLSGPNLLVCNPFCFDLCLVPFVQSRRSLSRVCQNEGKLHVLNLGICDVVLRKALIVFIGRILAFLSKASFRESPLKEKHGYVFPLRWGGKWKLFFQRPIYEREIGGLTNLIILLEKQKTSNLSNQQLWTLHLSGISLTVWSSITKSSQMDGPTGRSGGGMDMNLPNYKLGKTLGIGSFGKVKIAEHALTGHKVAIKILNRRKIKNLDMEEKVRREIKILRLFMHPHIIRLYEVIETPADIYVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKCNVKIADFGLSNIMRDGHFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSGARELIPSMLVVDPMKRITIPEIRQHPWFQAHLPRYLAVPPPDTMQQAKKIDEDILQEVVKMGFDRNQLVESLRNRIQNEATVAYYLLLDNRFRVSSGYLGAEFQETMETGFNHMHPGDPTSPAVGHRLPGYMDYQGMGLRSQFPVERKWALGLQSRAHPREIMTEVLKALRELNVAWKKIGHYNMKCRWLPGIPGHHEGMINNPVHSNHYFGDESTIIENDGVVKSPNVIKFEVQLYKTREEKYLLDLQRVQGPQFLFLDLCAAFLAQLRLLLGCRFLVVKIPKILSSLGTLTCFGKTAFVLLEKKFEENPCFFISDPFYTAKILFFLSICELAKMTQDAEMKELPAPLSSSSSSASPSTLQHLKEIVSLIETGAYAREVRRIVRAIRLTMALRRKLKASVVSQFLNLVLPPGSEVHTRLSSFLPKEDDCEMDVDTATQAPAKHPLPEIEIFCYLIVLIFLIDQKKYADAKACASASIARVKNLNRRTVDVLASRLYFYYSLSYELTGDLAEIRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQFCRYLFYLGKIRTIQLEYTDAKESLLQAARKAPIAALGFRVQCNKWAIIVRLLLGEIPERTVFMQKGMETALRPYFELTNAVRIGDLELFRTVAEKFSGTFSSDRTNNLIVRLRHNVIRTGLRNISISYSRISLVDVAKKLRLDSANPVTDAESIVSKAIRDGAIDATVDHGNGWMVSKETGDIYSTNEPQLAFNSRIAFCLNMHNEAVRALRFPPNSHKEKESAEKRRERQQQEQELAKHIAEEDDDDF | 1320 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 457509 | 474481 | - | CePI673135_06g000490.1 | Cec06g0049 | 204786 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec06g0049 | 1320 | ProSitePatterns | Protein kinases ATP-binding region signature. | 282 | 305 | IPR017441 | GO:0005524(InterPro) | |
Cec06g0049 | 1320 | SUPERFAMILY | Protein kinase-like (PK-like) | 273 | 546 | IPR011009 | - | |
Cec06g0049 | 1320 | Coils | Coil | 1287 | 1314 | - | - | |
Cec06g0049 | 1320 | Pfam | UBA/TS-N domain | 550 | 586 | IPR015940 | - | |
Cec06g0049 | 1320 | Pfam | Proteasome regulatory subunit C-terminal | 1253 | 1319 | IPR013586 | GO:0000502(InterPro)|GO:0030234(InterPro)|GO:0042176(InterPro) | |
Cec06g0049 | 1320 | FunFam | Non-specific serine/threonine protein kinase | 267 | 606 | - | - | |
Cec06g0049 | 1320 | MobiDBLite | consensus disorder prediction | 1284 | 1313 | - | - | |
Cec06g0049 | 1320 | ProSiteProfiles | Protein kinase domain profile. | 276 | 528 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec06g0049 | 1320 | Pfam | Kinase associated domain 1 | 729 | 771 | IPR001772 | - | |
Cec06g0049 | 1320 | Gene3D | - | 1087 | 1272 | - | - | |
Cec06g0049 | 1320 | SUPERFAMILY | Winged helix DNA-binding domain | 1180 | 1254 | IPR036390 | - | |
Cec06g0049 | 1320 | PANTHER | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3 | 836 | 1316 | IPR050756 | GO:0006511(PANTHER)|GO:0008541(PANTHER) | |
Cec06g0049 | 1320 | CDD | AMPKA_C | 646 | 769 | - | - | |
Cec06g0049 | 1320 | CDD | STKc_AMPK_alpha | 273 | 528 | - | - | |
Cec06g0049 | 1320 | CDD | UBA_SnRK1_plant | 550 | 590 | - | - | |
Cec06g0049 | 1320 | ProSiteProfiles | Kinase associated domain 1 (KA1) profile. | 723 | 771 | IPR001772 | - | |
Cec06g0049 | 1320 | ProSiteProfiles | PCI domain profile. | 1072 | 1253 | IPR000717 | - | |
Cec06g0049 | 1320 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 395 | 407 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec06g0049 | 1320 | SMART | motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 | 1178 | 1271 | IPR000717 | - | |
Cec06g0049 | 1320 | FunFam | Non-specific serine/threonine protein kinase | 652 | 770 | - | - | |
Cec06g0049 | 1320 | Gene3D | Transferase(Phosphotransferase) domain 1 | 269 | 607 | - | - | |
Cec06g0049 | 1320 | FunFam | 26S proteasome non-ATPase regulatory subunit 3 | 953 | 1276 | - | - | |
Cec06g0049 | 1320 | Gene3D | Kinase associated domain 1, KA1 | 652 | 770 | - | - | |
Cec06g0049 | 1320 | SUPERFAMILY | KA1-like | 585 | 770 | IPR028375 | - | |
Cec06g0049 | 1320 | MobiDBLite | consensus disorder prediction | 1284 | 1320 | - | - | |
Cec06g0049 | 1320 | Pfam | Protein kinase domain | 276 | 528 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec06g0049 | 1320 | SMART | uba_6 | 551 | 588 | IPR015940 | - | |
Cec06g0049 | 1320 | ProSiteProfiles | Ubiquitin-associated domain (UBA) profile. | 549 | 589 | IPR015940 | - | |
Cec06g0049 | 1320 | Pfam | PCI domain | 1170 | 1249 | IPR000717 | - | |
Cec06g0049 | 1320 | SMART | serkin_6 | 276 | 528 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec06g0049 | 1320 | SMART | PCI/PINT associated module | 1007 | 1178 | - | - | |
Cec06g0049 | 1320 | FunFam | Non-specific serine/threonine protein kinase | 266 | 355 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g0423 | Cec-Chr2:3995059 | Cec06g0049 | Cec-Chr6:457509 | 9.90E-252 | dispersed | |
Cec02g2220 | Cec-Chr2:39610205 | Cec06g0049 | Cec-Chr6:457509 | 3.90E-39 | dispersed | |
Cec06g0049 | Cec-Chr6:457509 | Cec08g1221 | Cec-Chr8:24123399 | 4.70E-70 | dispersed | |
Cec06g0049 | Cec-Chr6:457509 | Cec11g0064 | Cec-Chr11:790418 | 3.50E-190 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72053 | PF00069 | Pkinase | 1.70E-79 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec06g0049 | K07198 | - | csv:101211720 | 1011.13 |