Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g0093 ATGCATACACATGAACACAACGTCCATGAAGCGCCTGCAGAGGGCTTTCTTCACCAACTTCAGCTTTCTTCTCCTTCAACCGAGATGGAAGTGCAAGATCATGGTCACATAATTGAAGTGTGTGGAGATTTGCAAGCTGTAGGGCCTAGCACTGTGGGAAGTAAAATTTGTGGGGATGCACCCTCTTGTGGATTTTCTGATGCAAAAAGCAGTTCAAAAGATGCAAAGGAGCGATCTGCGTCTATGCGGAAGCTTTGCATAGCAGTTGTTCTCTGCATCGTTTTTATGAGTGTAGAAGTAGTCGGAGGTATTAAAGCAAACAGTCTTGCAATATTGACTGATGCTGCTCATTTGTTGTCAGATGTTGCTGCTTTTGCCATTTCTTTATTCTCACTCTGGGCCTCTGGTTGGGAGGCAACTCCACGTCAGTCATATGGTTTCTTCCGCATTGAAATACTCGGTGCTCTCGTTTCCATTCAGATGATCTGGCTTCTAGCTGGAATTCTTGTTTACGAAGCTATCGTCCGACTTATAAATGGTCCGGGAGAAGTCAAGGGGTTGCTCATGTTTGCTGTTTCGACATTTGGGTTAGTTGTTAACATAGCTATGGCTCTGCTGCTTGGTCACGAACATGGTCATGCCCATTCTCATGGTCACAGTCATGGACACAGTGAGCATGGCCATGGTCATGGCGGCCATGAACATGGTGATGAAGATCATAGGCATCATCATGGAATAAGTGTGACCACCCACCACCATCACCACCACCACCACCACCATGGAGAAGAGAAGGGAGCTGGCAGCGAAGGTGTTGAGCAGCAGCAGCAGCATCATGACCACAAGGAATCAGTAGCTACACCCTTGCTTGAGAGTTGTGTTGACGACGGAAATCCTTCACGGAAGGTTACCAAGATGCAAAAGAAACAACGAAACATAAACGTACAGGGGGCTTATCTTCATGTACTTGGAGATTCCATCCAAAGCATCGGGGTGATGATCGGTGGGGCAATCATATGGTATAAACCGGAATACAAGATTCTTGATCTGATATGCACCCTCATTTTCTCTGCAATTGTGCTGTGCACAACAATTCAAATGCTTCGAAATATCCTCGAGGTTTTGATGGAGAGCACGCCGCGAGAGGTGGACGCAACAAAGCTTGAGAAGGGTTTGTGCGAGATGGAGGAGGTAGTTGCAATCCATGAACTGCACATATGGGCCATAACTGTTGGGAAGATTCTATTGGCATGCCATGTTATAATAAAGCCAGAGGCAAATGCCGACATGAGCGCCAGTAGGATCTTTCAATGCCATGCTTTGTTGTTGTGTAGATTGACAGAGGGATTTCTCCAATGA 1356 46.31 MHTHEHNVHEAPAEGFLHQLQLSSPSTEMEVQDHGHIIEVCGDLQAVGPSTVGSKICGDAPSCGFSDAKSSSKDAKERSASMRKLCIAVVLCIVFMSVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWASGWEATPRQSYGFFRIEILGALVSIQMIWLLAGILVYEAIVRLINGPGEVKGLLMFAVSTFGLVVNIAMALLLGHEHGHAHSHGHSHGHSEHGHGHGGHEHGDEDHRHHHGISVTTHHHHHHHHHHGEEKGAGSEGVEQQQQHHDHKESVATPLLESCVDDGNPSRKVTKMQKKQRNINVQGAYLHVLGDSIQSIGVMIGGAIIWYKPEYKILDLICTLIFSAIVLCTTIQMLRNILEVLMESTPREVDATKLEKGLCEMEEVVAIHELHIWAITVGKILLACHVIIKPEANADMSASRIFQCHALLLCRLTEGFLQ 451
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 862250 870506 - CePI673135_06g000930.1 Cec06g0093 204830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g0093 451 MobiDBLite consensus disorder prediction 246 261 - -
Cec06g0093 451 MobiDBLite consensus disorder prediction 212 308 - -
Cec06g0093 451 Gene3D Cation efflux protein transmembrane domain 81 374 IPR027469 -
Cec06g0093 451 Pfam Cation efflux family 86 375 IPR002524 GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec06g0093 451 SUPERFAMILY Cation efflux protein transmembrane domain-like 79 376 IPR027469 -
Cec06g0093 451 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 51 433 IPR050681 GO:0005385(PANTHER)|GO:0005773(PANTHER)|GO:0005886(PANTHER)|GO:0071577(PANTHER)
Cec06g0093 451 MobiDBLite consensus disorder prediction 262 285 - -
Cec06g0093 451 NCBIfam cation diffusion facilitator family transporter 82 428 IPR002524 GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec06g0093 451 MobiDBLite consensus disorder prediction 225 245 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0115 Cec-Chr3:1145897 Cec06g0093 Cec-Chr6:862250 8.10E-71 dispersed
Cec06g0093 Cec-Chr6:862250 Cec10g1476 Cec-Chr10:29158778 3.60E-14 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g0093 K14689 - csv:101213602 599.742