Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g0106 ATGATGATGAGAGAGAGAAGAAGTTGTGTTGTTGTATCCCTTGTGGGTATAGCATTATTGATGAGTTTATCCATTGTGAGAGGTGAAAATACATTACAATCACCAGTTAAGCTGGTATGGCATTACTACAAGCTCAACGCAACTTGCCCTTATGCTGAGGAATACATAAAGCATCAAGTCAAGTTGTTTTGGGACAAGGATAAGACCATTGCTGCCAAGTTCCTTCGTTTGCTCTCTGCAGATTGCCTTTCCAAAAATGGTTGTGACGGCTCAATACTTCTTGACGGTCCAAATTCAGAGAAAAATGCACCACAAAACCAAGGCCTTGGAGGGTTTGAAGAGATTGACAAGATCAAAATTGTACTCGAAGAAAGATGTCCGGGTGTTGTTTCTTGTACAGACATTTTAAACTTAGCCACTAGAGATGCTGCCCATTTGGCAGGTGCACCATCTTATCCAGTTTTTACTGGGAGGAGGGATGGTTTTACAAGTAGTATTGATGCAGTGGATTTACCATCTCCCTCCATATCATGGCAAGAAGGACTTAATTATTTTCAATCTAAAGGTCTTGATGTTTTGGACATGACAACACTACTAGGTGCACATTCAATGGGAAAAACACACTGTCGATACATCATGGATAGGCTATACAATTTCAAAGGCACAAAAAAACCCGATCCATCAATGGACAAATCATTGTTAAAACAGCTTCAAAAGAAATGCCCCAAAAATTCAAAAACAGACCCAAGAGTGAATCTAACACCAAAATCTGGAAATGACTATCAATTCACAAGTCTTTACTACTCGAGAATTCTTTCGAAAAAGGCGGTCCTCGGTCTCGATCAACAACTTCTTTTCGGTAACGACACGAATGAAATTGTCCAGGAATTTGCTCCAGAATCTGGATTTGAAGACTTTCGTCGGTCCTTTGCTTTGTCTATGAGTAGGATGGGAAATATCAAGGTTTTGACTGGAAAAGATGGCGAGATTCGACGACATTGTCGCCGAAGAAACTAG 1017 40.31 MMMRERRSCVVVSLVGIALLMSLSIVRGENTLQSPVKLVWHYYKLNATCPYAEEYIKHQVKLFWDKDKTIAAKFLRLLSADCLSKNGCDGSILLDGPNSEKNAPQNQGLGGFEEIDKIKIVLEERCPGVVSCTDILNLATRDAAHLAGAPSYPVFTGRRDGFTSSIDAVDLPSPSISWQEGLNYFQSKGLDVLDMTTLLGAHSMGKTHCRYIMDRLYNFKGTKKPDPSMDKSLLKQLQKKCPKNSKTDPRVNLTPKSGNDYQFTSLYYSRILSKKAVLGLDQQLLFGNDTNEIVQEFAPESGFEDFRRSFALSMSRMGNIKVLTGKDGEIRRHCRRRN 338
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 999337 1003612 + CePI673135_06g001060.1 Cec06g0106 204843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g0106 338 PRINTS Haem peroxidase superfamily signature 130 147 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g0106 338 PRINTS Haem peroxidase superfamily signature 148 160 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g0106 338 PRINTS Haem peroxidase superfamily signature 71 85 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g0106 338 PRINTS Haem peroxidase superfamily signature 194 209 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g0106 338 SUPERFAMILY Heme-dependent peroxidases 44 338 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g0106 338 Pfam Peroxidase 57 298 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g0106 338 ProSiteProfiles Plant heme peroxidase family profile. 37 338 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g0106 338 Gene3D - 42 338 - -
Cec06g0106 338 FunFam Peroxidase 172 317 - -
Cec06g0106 338 CDD secretory_peroxidase 37 336 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cec06g0106 338 ProSitePatterns Peroxidases proximal heme-ligand signature. 194 204 IPR019793 -
Cec06g0106 338 PRINTS Plant peroxidase signature 49 68 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g0106 338 PRINTS Plant peroxidase signature 270 287 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g0106 338 PRINTS Plant peroxidase signature 312 325 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g0106 338 PRINTS Plant peroxidase signature 110 123 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g0106 338 PRINTS Plant peroxidase signature 129 139 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g0106 338 PRINTS Plant peroxidase signature 193 205 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g0106 338 PRINTS Plant peroxidase signature 148 163 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec06g0106 338 Gene3D Peroxidase, domain 2 172 317 - -
Cec06g0106 338 PANTHER PEROXIDASE 25-RELATED 41 334 IPR000823 GO:0004601(InterPro)|GO:0004601(PANTHER)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g0106 Cec-Chr6:999337 Cec09g2368 Cec-Chr9:40523822 3.50E-54 dispersed
Cec06g0106 Cec-Chr6:999337 Cec04g1355 Cec-Chr4:33177770 9.50E-52 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g0106 K00430 - csv:101213667 582.022