Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g0149 ATGGCCGGCTTGGTCACTGGTTCCCAACACTATTCCCACGGTGCTGATGAGAGTCTTCGTGGACCTCCACTATCGTCGAAAATATGTCGAGTTTGCAGTGACGAAATAGGACTAAAACAAGATGGGAAAGTATTTGTGGCATGTCTTGTGTGCAATTTCCCTGTTTGTCGACCTTGTTATGAGTATGAAAGGAGCGAAGGCAATAGGTGTTGTCCCCAATGCAACACTCGCTATAAGCGTCACAAAGGCTCACCCAGAGTGATCGGCGACGAGGAAGAAGGTGACGATGCCGATGATTTTGACGATGAGTTCCCCATGAAACACCACAACAATGACGAATTTCAAACAAAGCAGCCTAATCATTCGGAAAACGGTAACTACAATGAGCAGAATTGGCATAAAAATGTTCAGAATTTGTTCTCAGTTGCTGGAAGTGTGAATGGGAAGGATATGGAAGGGGAAAAAGAGGGTTATGGAAGTGTAGAATGGAAGGAGAGAATTGATAAGTGGAAAGTGAGGCAAGAGAAGAGAGGTTTGGGAAACAAAGAAGATGGAAGTAACAATGATCAAGAAGAAGATGACTACTTATTGGCAGAAGCCCGGCAGCCGCTATGGCGGAAACTTCAAATATCGTCAAGCAAAATCAGTCCATATCGCATCGTCATTGTCCTCCGCCTCATAATTCTTGCATTCTTCTTCCGATTTCGGATCCTTACTCCGGCCTACGACGCCTTCCCCTTGTGGCTGATCTCCGTCATCTGCGAAATTTGGTTCGGCTTCTCCTGGATTCTCGATCAGTTCCCCAAATGGGCTCCCATCAACCGGGAGACCTACCTAGATCGCCTCTCCATGCGCTTCGAGCGCGAAGGCGAGCCCAACCGCCTCTCACCGATCGACTTCTTCGTCAGCACGGTGGACCCTCTGAAAGAGCCGCCGATCATAACCGCCAACACCGTCCTTTCCATCCTCTCGGTCGACTATCCGGTGGAGAAGGTCAGCTGCTACGTATCGGACGATGGAGCGTCGATGCTGCTGTTCGATACGCTGGCGGAGACTGCGGAGTTTGCTCGGAGATGGGTGCCATTTTGCAAGAAGTTCAGCATCGAACCTAGGGCTCCGGAGTTCTATTTCTCACAGAAGATGGATTACTTGAAGGATAAGGTGCTGGCTAGCTTTGTGAAGGAGAGGAGGGCAATGAAGAGGGAATACGAAGAGTTCAAGGTGAGGATCAACGCGTTGGTGGCGAAGGCTCAGAAGAAACCAGAAGAGGGATGGGTAATGCAAGATGGCACTCCATGGCCTGGAAACCTCACCCGTGATCATCCTGGCATGATACAGGTGTATTTGGGAAGTGAAGGTGCACTTGACGTGGAAGGTAAAGAGTTGCCTCGTCTTGTATATGTTTCTCGTGAGAAACGCCCTGGATATCAACACCACAAGAAAGCTGGTGCTATGAATGCTCTTGTTCGAGTCTCTGCAGTCCTCACAAATGCACCGTTCATCTTAAATCTGGATTGTGATCACTACGTCAACAATAGCAAAGCTGTAAGGGAAGCCATGTGCTTTCTAATGGACCCTCAGCTTGGAAAGAAACTATGCTATGTTCAGTTTCCTCAAAGATTTGATGGTATTGATCGTCACGACAGATATGCTAATCGGAATATCGTGTTCTTTGATATCAACATGCGAGGGCTAGATGGAATCCAAGGCCCAGTTTATGTTGGCACAGGATGTGTCTTCAACAGGCAGGCTTTATATGGATATGAACCACCAGTCTCTGAGAAAAGGCCAAAGATGACATGCGATTGTTGGCCTTCCTGGTGTTGCTGCTGCTGCGGTGGTTCAAGGAAATCAAAATCCAAGAGGAAAGGAGAAAGAGGTTTGCTTGGAGGCCTGTTCAAGAAGAAGAAAATGATGGGGAAGAGTTATGTAAGGAAAGCGCCGGGACCAGTTTTTGATCTTGAAGAGATTGAAGAAGGGTTCGAAGGTTATGATGAGTTGGAGAAGTCATCACTCATGTCGCAAAAGAATTTCGAGAAAAGATTCGGACAATCACCAGTTTTCATCGCTTCTACCCTTAAGGAAGATGGAGGTCTTCCAGAAGGGACTAACAGCACTTCACTTGTTAAAGAAGCCATCCATGTGATTAGCTGTGGTTATGAAGAGAAAACAGAATGGGGAAAAGAGATAGGTTGGATTTACGGTTCTGTCACTGAGGATATTTTGACTGGATTCAAGATGCATTGTAGAGGATGGAAGTCAGTGTACTGCATGCCCCAGAGACCAGCTTTCAAGGGATCGGCTCCAATAAATCTTTCGGATCGTTTGCACCAAGTTCTGAGATGGGCTTTAGGTTCTGTTGAAATTTTCCTTAGCCGACACTGCCCGCTGTGGTATGCTTATGGAGGAAAGCTAAAATGGCTTGAAAGGCTTGCCTACATCAACACTATTGTTTACCCTTTTACTTCCATTCCATTACTTGCTTACTGCACAATCCCAGCTGTCTGTCTTCTCACTGGAAAATTCATTATCCCCACCTTGACGAACTTGGCTAGCGTCTGGTTCATGGCGTTGTTTATTTCCATCATTGCAACGGCCGTGCTGGAGCTTCGATGGAGTGAAGTGAGTATTGAAGACTTATGGCGTAATGAGCAATTCTGGGTGATTGGTGGTGTCTCCGCACATCTTTTTGCAGTGTTCCAAGGCCTTCTCAAGGTCCTTGGCGGAGTAGACACCAACTTCACAGTTACAGCGAAAGCAGCTGAAGACACCGAGTTTGGAGAGCTCTATCTTTTCAAGTGGACGACACTCCTCATCCCGCCGACCACTCTCATAATCTTGAACATGGTGGGAGTGGTTGCTGGAGTTTCAGATGCAATCAACAATGGCTACGGTTCATGGGGTCCTCTGTTTGGAAAACTGTTTTTTGCTTTCTGGGTAATTGTTCATCTCTATCCTTTCCTCAAGGGTCTGATGGGAAGACAAAACAGGACCCCCACCATCGTCGTCCTTTGGTCCGTCCTTCTTGCTTCCATATTTTCACTGGTTTGGGTGCGAATTGATCCCTTCTTGCCCAAGCAAACAGGTCCTGTCCTCAAACAATGTGGAGTTGATTGCTAG 3120 47.08 MAGLVTGSQHYSHGADESLRGPPLSSKICRVCSDEIGLKQDGKVFVACLVCNFPVCRPCYEYERSEGNRCCPQCNTRYKRHKGSPRVIGDEEEGDDADDFDDEFPMKHHNNDEFQTKQPNHSENGNYNEQNWHKNVQNLFSVAGSVNGKDMEGEKEGYGSVEWKERIDKWKVRQEKRGLGNKEDGSNNDQEEDDYLLAEARQPLWRKLQISSSKISPYRIVIVLRLIILAFFFRFRILTPAYDAFPLWLISVICEIWFGFSWILDQFPKWAPINRETYLDRLSMRFEREGEPNRLSPIDFFVSTVDPLKEPPIITANTVLSILSVDYPVEKVSCYVSDDGASMLLFDTLAETAEFARRWVPFCKKFSIEPRAPEFYFSQKMDYLKDKVLASFVKERRAMKREYEEFKVRINALVAKAQKKPEEGWVMQDGTPWPGNLTRDHPGMIQVYLGSEGALDVEGKELPRLVYVSREKRPGYQHHKKAGAMNALVRVSAVLTNAPFILNLDCDHYVNNSKAVREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNIVFFDINMRGLDGIQGPVYVGTGCVFNRQALYGYEPPVSEKRPKMTCDCWPSWCCCCCGGSRKSKSKRKGERGLLGGLFKKKKMMGKSYVRKAPGPVFDLEEIEEGFEGYDELEKSSLMSQKNFEKRFGQSPVFIASTLKEDGGLPEGTNSTSLVKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPQRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYAYGGKLKWLERLAYINTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTLTNLASVWFMALFISIIATAVLELRWSEVSIEDLWRNEQFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTAKAAEDTEFGELYLFKWTTLLIPPTTLIILNMVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSVLLASIFSLVWVRIDPFLPKQTGPVLKQCGVDC 1039
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1527952 1535034 + CePI673135_06g001490.1 Cec06g0149 204886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g0149 1039 CDD mRING-HC-C4C4_CesA 27 77 - -
Cec06g0149 1039 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 403 590 IPR029044 -
Cec06g0149 1039 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 209 1008 - GO:0005802(PANTHER)|GO:0005886(PANTHER)|GO:0009833(PANTHER)|GO:0016759(PANTHER)|GO:0030244(PANTHER)
Cec06g0149 1039 MobiDBLite consensus disorder prediction 107 129 - -
Cec06g0149 1039 Coils Coil 396 416 - -
Cec06g0149 1039 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 12 102 IPR013083 -
Cec06g0149 1039 FunFam Cellulose synthase 415 589 - -
Cec06g0149 1039 SUPERFAMILY Nucleotide-diphospho-sugar transferases 311 852 IPR029044 -
Cec06g0149 1039 SUPERFAMILY RING/U-box 23 100 - -
Cec06g0149 1039 Pfam Zinc-binding RING-finger 24 95 IPR027934 -
Cec06g0149 1039 Pfam Cellulose synthase 298 1032 IPR005150 GO:0016020(InterPro)|GO:0016760(InterPro)|GO:0030244(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0660 Cec-Chr3:7113726 Cec06g0149 Cec-Chr6:1527952 0.00E+00 dispersed
Cec06g0149 Cec-Chr6:1527952 Cec11g1171 Cec-Chr11:24017616 0.00E+00 dispersed
Cec06g0149 Cec-Chr6:1527952 Cec02g0927 Cec-Chr2:12228845 1.90E-106 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g0149 K10999 - csv:101205733 1956.8