Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec06g0159 | ATGATGGATGGTTGGCTAACAGCGCTCCTTGCCCTTTCAATTTGTGCAGTCTTACACTTGGTTTTGAGCTTTATTTTGCATCGCAAGCAAAATCTCCCACCCGGTCCTCTTGCTTTACCTCTTATAGGGAATCCCATATGGCTTTTCAAGCCTCTTTCCCAACTTGAAACCATTCTTCGCCATTACCATTCCAAATACGGCCCTGTTGTTACCCTCTACTTTGGTAACACTCCTTCCATTTTCATAGCTAGCCACTCTGTTTCTCACCATGCTTTGGTTCAAAACGGCGCCGTCTTCGCCGACCGTTTCCCCGTCATGGAAACTGCCAAAATCATCACTAGTAACCAACATAATATCAGCACCGCCTTCTACGGTCCCACATGGCGTATTCTCCGCCGCAACCTCACCTCCGAGCTCCTCCATCCGTCTCGATTGAAAGCTCACTCGCCTACTCGTAAATGGGTGTCGGATGATCTCGTCCATCGCCTCCATCAGGCCCCTGGTCCTGTAAAGCTCCTTGACCATCTTCGTTATGCCATGTTTTGTTTAGCTACAACTATGTGTTTTGGGGAGAGATTTGATGATAAATTGATTCGTGAAATACAAGAATCTCAACGTGGGGTGTTGTTGAATATCACCAAGTTCAATGATCTTAATTTTTGGCCTCCTAGATTGGGGAAGTTTTTGTTCAAGAAGCGTTGGGACGAGATTCGTCAACTACGTAAACGTCAAGATGATTGCTTATTACCTTTGATTAACAAAGCAAGACAAAACAGAACAACAATCAAAGATAAAGAAGCTGCAGGGAAGGCAATCCCTTATGTTGATACTCTGTTTGATTTGGAAATTGCTGACAACAATGATGAGAAGGTAAAGAGGAAATTGGTTGATGATGAGCTCATAACATTATGCTCTGAGTTTCTTGACGCCATTACGGATACAACGACCGTGTCGTTGCAATGGATAATGGCGAATTTAGTGAAGCAAACAGAAATTCAAGAGAAAGTGTACAAAGAGATAAAAGAAGTGATGCAAATTAAGGAGAAGAATGAAGAGATAGAAGAGGAAGATTTGGGGAAGATGACATATTTGAAAGCAGTAATAATGGAAGGACTACGGCGACATCCGCCGGGGCATTTTTTGTTGCCTCATCAAGTGATGGAGGATAGTGTTTTGGAAGGAGGATACAAGGTGCCAAAAGGAACATCAGTGAACTTTATGGTAGCAGACATGGGTTGGGACCCGAAAGTATGGCTGGAACCGACGGCGTTTAAGCCGGAGAGATTCTTGAATGATAGGTCAAAGGGAGGGGTTGAATTGGAAGTTGATATCACAGGAAGTAAGGAAATAAAGATGATGCCATTTGGGGCTGGGAGGAGGATATGCCCAGGTTTTGCATTGGGGTTATTGCATTTGGAGTATTACATTGGGAATTTGGTGTGGAACTTCGAGTGGAAGGCTGCTGGGGAAGTTGATTTGACTGAGACCCAAGAAAATGCTGTCACCATGAAATATCCCTTGCTTGCTTACTTGTCTCCAAGGCCTGTTTCTTAG | 1554 | 43.95 | MMDGWLTALLALSICAVLHLVLSFILHRKQNLPPGPLALPLIGNPIWLFKPLSQLETILRHYHSKYGPVVTLYFGNTPSIFIASHSVSHHALVQNGAVFADRFPVMETAKIITSNQHNISTAFYGPTWRILRRNLTSELLHPSRLKAHSPTRKWVSDDLVHRLHQAPGPVKLLDHLRYAMFCLATTMCFGERFDDKLIREIQESQRGVLLNITKFNDLNFWPPRLGKFLFKKRWDEIRQLRKRQDDCLLPLINKARQNRTTIKDKEAAGKAIPYVDTLFDLEIADNNDEKVKRKLVDDELITLCSEFLDAITDTTTVSLQWIMANLVKQTEIQEKVYKEIKEVMQIKEKNEEIEEEDLGKMTYLKAVIMEGLRRHPPGHFLLPHQVMEDSVLEGGYKVPKGTSVNFMVADMGWDPKVWLEPTAFKPERFLNDRSKGGVELEVDITGSKEIKMMPFGAGRRICPGFALGLLHLEYYIGNLVWNFEWKAAGEVDLTETQENAVTMKYPLLAYLSPRPVS | 517 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 1611835 | 1613388 | + | CePI673135_06g001590.1 | Cec06g0159 | 204896 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec06g0159 | 517 | Gene3D | Cytochrome P450 | 25 | 516 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec06g0159 | 517 | CDD | CYP77_89 | 65 | 507 | - | - | |
| Cec06g0159 | 517 | FunFam | Cytochrome P450 family protein | 26 | 516 | - | - | |
| Cec06g0159 | 517 | Coils | Coil | 336 | 356 | - | - | |
| Cec06g0159 | 517 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 455 | 464 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cec06g0159 | 517 | PRINTS | P450 superfamily signature | 453 | 462 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec06g0159 | 517 | PRINTS | P450 superfamily signature | 366 | 377 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec06g0159 | 517 | PRINTS | P450 superfamily signature | 310 | 327 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec06g0159 | 517 | PRINTS | P450 superfamily signature | 462 | 473 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec06g0159 | 517 | Pfam | Cytochrome P450 | 33 | 503 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec06g0159 | 517 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 17 | 514 | IPR051103 | GO:0016020(PANTHER)|GO:0016709(PANTHER) | |
| Cec06g0159 | 517 | PRINTS | E-class P450 group I signature | 179 | 197 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec06g0159 | 517 | PRINTS | E-class P450 group I signature | 365 | 383 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec06g0159 | 517 | PRINTS | E-class P450 group I signature | 87 | 108 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec06g0159 | 517 | PRINTS | E-class P450 group I signature | 407 | 431 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec06g0159 | 517 | PRINTS | E-class P450 group I signature | 63 | 82 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec06g0159 | 517 | PRINTS | E-class P450 group I signature | 299 | 316 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec06g0159 | 517 | PRINTS | E-class P450 group I signature | 452 | 462 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec06g0159 | 517 | PRINTS | E-class P450 group I signature | 319 | 345 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec06g0159 | 517 | PRINTS | E-class P450 group I signature | 462 | 485 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec06g0159 | 517 | SUPERFAMILY | Cytochrome P450 | 31 | 514 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cec02g0799 | Cec-Chr2:9489039 | Cec06g0159 | Cec-Chr6:1611835 | 1.50E-117 | dispersed | |
| Cec06g0159 | Cec-Chr6:1611835 | Cec09g1809 | Cec-Chr9:34103773 | 3.90E-153 | dispersed | |
| Cec06g0158 | Cec-Chr6:1606999 | Cec06g0159 | Cec-Chr6:1611835 | 4.70E-42 | tandem | |
| Cec06g0159 | Cec-Chr6:1611835 | Cec06g0160 | Cec-Chr6:1618991 | 3.00E-49 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec06g0159 | K24184 | - | csv:101204774 | 848.966 |