Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g0165 ATGGGGAAAGAGAAACTACCTACCCATCTTTGGAATTTCCAAGTCCTTAAGAGCAAATACATGGGGCGTTCCCTAGTTGCTGGCCTCTGTTTATGGTTCTCTCTGACATTGGTGATTGCAGATGCTAATGACTCTTCTTTGGGGGGTTTAGTCTGGTCTTCTGCAAAAGAAGAGGGCGATCTCCTTATTGAGCACAGGCCCCAGGAAGATTCCGCCGCCGCCACACCTGTCGTTCACGACGCCGATGGCTTTGATGGCGGCTTTTCTTCCCTCGATAGCATGTTACAGTGGGCTATAGGCCATTCTGATCCTGCAAAACTGAAGGATACTGCACAGGATGTGAAACGATTGTCTCCAAGTGAGATAAAGAAGCGTCAAGAAGAAATTAAGGACCTAATAGAGGAGTTGAAGGTGCCATCAGATGCAAAGCTGATGCAAATTGCGATAGATGACTTGAAAAATTCCTCTCTATCATTGGAAGATCGCCATCGGGCATTACAGGAGCTTTTAGTACTCGTTGAGCCAATAGACAATGCAAATGATTTGGACAAACTTGGGGGCCTTGCTGTGCTTATTCATGAGCTTAATCATTTCGATCCTGATATTAGGAAAGTTGCAGCGTGGATTCTCGGAAAAGCAAGTCAGAATAACCCTATTGTTCAAAAGCAGGTATTGGAACTCGGGGCACTAGCAAAATTAGTAACGATGGTAAAATCTGATTTTGTAGAAGAAGCCATCAAGGCATTGTATGCTATTTCATCGTTGGTTCAAAATAATTTATCTGGCCAGGAATTATTCTATGCCGAAGCTGGAGAAACTATGCTTCAGGATATTTTAAGCAACTCGAGCATGGATATCAGATTGCAAAAGAAAGCTGTTTTTCTTGCAAGTGATTTGGCTGTGACACAACTAGAAAAAACAGATGAAGCTGAAAGGCCATTTTTTGGAGATCGCCTTTTCTTGAAGTCTGTGGTTGATCTCATCCATTCCACAGACATTGATCTCCAGGAGAAGGCCCTCATTGCTCTAAAGAACCTCCTGCTTTTGAGAACAACGAAAGCTCAAGTTTTAAGAGAATTTTGTGGGTTGGATGTTGCTTTGGAGAGGATGAGGGTGAAGCTGGAGGTATTAAAGGAAGGGGAAGATCACCGAGATTATGCAATGGATGTGGAAGATCTACGAAGCCAAGTGGAGTTACTTTTCCTTGAAAAGCTGGGAAAGAGAATGCAGCGGCCGGCGGCATCTTTCTCTCACGAACATCCATCCCGGCGGCATCTTTCTCTCTCGAGCACCCATCCCGCCGTATTTTCATTTATTACGATGGCTGATGCTCATGAAACTGATAAGAACATTGAAATATGGAAAATTAAGAAGTTGATTAAAGCACTTGAAGCTGCAAGAGGTAATGGGACTAGCATGATCTCTCTCATCATGCCTCCGCGTGATCAAATATCTCGTGTTACTAAGATGCTTGGTGATGAATTTGGAACTGCTTCGAACATTAAGAGCAGGGTAAATCGTCAATCTGTTTTGGGTGCTATCACGTCTGCTCAGCAGAGACTCAAGCTGTATAACAAGGTTCCTCCAAATGGGCTTGTGCTTTATACTGGGACAATCGTGACTGAAGATGGAAAAGAAAAGAAAGTCACAATTGATTTTGAGCCTTTCAGGCCTATAAATGCATCTCTTTATCTCTGTGACAACAAGTTCCACACGGAAGCTCTGAATGAACTGTTAGAATCTGATGACAAGTTTGGCTTCATTGTCATGGATGGTAATGGAACTCTCTTTGGCACATTGAGTGGTAACACACGTGAAGTCCTTCACAAATTTAGTGTCGACCTTCCTAAGAAACATGGAAGAGGAGGTCAGTCAGCACTTAGGTTTGCCCGTCTTCGGATGGAGAAGCGGCACAACTATGTGAGGAAAACAGCAGAGCTTGCAACCCAGTTCTTTATTAATCCTGCCACTAGTCAACCCAATGTTGCAGGATTGATACTGGCTGGATCAGCTGACTTCAAAACAGAGCTCAGTCAATCCGACATGTTTGATCCTCGTCTTCAGGCCAAAATACTTAATGTTGTCGATGTCTCTTATGGAGGGGAAAATGGATTCAATCAAGCTATTGAATTGTCATCCGAGATCTTGTCGAATGTAAAATTTATACAGGAGAAGCGCTTGATTGGAAAATACTTTGAAGAGATTAGCCAGGACACAGGGAAGTATGTTTTTGGTGTTGACGACACACTGAAAGCTCTGGAGATGGGTGCTGTTGAAATACTTATTGTTTGGGAAAATTTAGATATCAATAGGTATGTATTAAAGAATGCTGCCACTGGTGAGATTATTATAAAGCACTTGAACAAGGAACAGGAAGCCAATCAGAGCAACTTTCGTGACACCGCCACCTCTGCTGAGTTGGAGGTTCAAGAAAAGATGGCCTTGCTGGAATGGTTTGCAAACGAGTACAAGAAGTTTGGTTGCACCCTGGAGTTCGTTACCAACAAATCACAGGAAGGATCACAGTTCTGCAGAGGTTTTGGTGGTATTGGAGGAATTCTTCGTTACCAGCTTGACATAAGATCGTTTGATGAACTATCTGATGGGGAAGAGTACGGTGATTCTGAATAG 2631 43.14 MGKEKLPTHLWNFQVLKSKYMGRSLVAGLCLWFSLTLVIADANDSSLGGLVWSSAKEEGDLLIEHRPQEDSAAATPVVHDADGFDGGFSSLDSMLQWAIGHSDPAKLKDTAQDVKRLSPSEIKKRQEEIKDLIEELKVPSDAKLMQIAIDDLKNSSLSLEDRHRALQELLVLVEPIDNANDLDKLGGLAVLIHELNHFDPDIRKVAAWILGKASQNNPIVQKQVLELGALAKLVTMVKSDFVEEAIKALYAISSLVQNNLSGQELFYAEAGETMLQDILSNSSMDIRLQKKAVFLASDLAVTQLEKTDEAERPFFGDRLFLKSVVDLIHSTDIDLQEKALIALKNLLLLRTTKAQVLREFCGLDVALERMRVKLEVLKEGEDHRDYAMDVEDLRSQVELLFLEKLGKRMQRPAASFSHEHPSRRHLSLSSTHPAVFSFITMADAHETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVEILIVWENLDINRYVLKNAATGEIIIKHLNKEQEANQSNFRDTATSAELEVQEKMALLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDIRSFDELSDGEEYGDSE 876
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1683433 1691176 - CePI673135_06g001650.1 Cec06g0165 204902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g0165 876 Pfam eRF1 domain 3 721 858 IPR005142 -
Cec06g0165 876 Gene3D - 719 876 IPR029064 -
Cec06g0165 876 Gene3D eRF1 domain 1 437 575 IPR024049 -
Cec06g0165 876 FunFam Peptide chain release factor subunit 1 719 876 - -
Cec06g0165 876 FunFam Eukaryotic peptide chain release factor subunit 1 576 717 - -
Cec06g0165 876 SUPERFAMILY Translational machinery components 582 716 - -
Cec06g0165 876 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 446 580 IPR024049 -
Cec06g0165 876 Pfam Nucleotide exchange factor Fes1 91 182 IPR013918 -
Cec06g0165 876 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 442 867 IPR004403 GO:0002184(PANTHER)|GO:0003747(InterPro)|GO:0005829(PANTHER)|GO:0006415(InterPro)|GO:0016149(PANTHER)|GO:0018444(PANTHER)|GO:1990825(PANTHER)
Cec06g0165 876 Pfam eRF1 domain 2 584 717 IPR005141 -
Cec06g0165 876 Pfam eRF1 domain 1 457 579 IPR005140 -
Cec06g0165 876 SMART eRF1_1_2 444 580 IPR005140 -
Cec06g0165 876 Coils Coil 149 169 - -
Cec06g0165 876 NCBIfam peptide chain release factor aRF-1 452 857 IPR004403 GO:0003747(InterPro)|GO:0006415(InterPro)
Cec06g0165 876 FunFam Eukaryotic peptide chain release factor subunit 1 442 575 - -
Cec06g0165 876 Gene3D eRF1 domain 2 576 717 IPR042226 -
Cec06g0165 876 SUPERFAMILY ARM repeat 130 361 IPR016024 -
Cec06g0165 876 Gene3D - 124 409 IPR011989 -
Cec06g0165 876 SUPERFAMILY L30e-like 718 860 IPR029064 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g0165 K03265 - csv:101218139 842.802