Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec06g0165 | ATGGGGAAAGAGAAACTACCTACCCATCTTTGGAATTTCCAAGTCCTTAAGAGCAAATACATGGGGCGTTCCCTAGTTGCTGGCCTCTGTTTATGGTTCTCTCTGACATTGGTGATTGCAGATGCTAATGACTCTTCTTTGGGGGGTTTAGTCTGGTCTTCTGCAAAAGAAGAGGGCGATCTCCTTATTGAGCACAGGCCCCAGGAAGATTCCGCCGCCGCCACACCTGTCGTTCACGACGCCGATGGCTTTGATGGCGGCTTTTCTTCCCTCGATAGCATGTTACAGTGGGCTATAGGCCATTCTGATCCTGCAAAACTGAAGGATACTGCACAGGATGTGAAACGATTGTCTCCAAGTGAGATAAAGAAGCGTCAAGAAGAAATTAAGGACCTAATAGAGGAGTTGAAGGTGCCATCAGATGCAAAGCTGATGCAAATTGCGATAGATGACTTGAAAAATTCCTCTCTATCATTGGAAGATCGCCATCGGGCATTACAGGAGCTTTTAGTACTCGTTGAGCCAATAGACAATGCAAATGATTTGGACAAACTTGGGGGCCTTGCTGTGCTTATTCATGAGCTTAATCATTTCGATCCTGATATTAGGAAAGTTGCAGCGTGGATTCTCGGAAAAGCAAGTCAGAATAACCCTATTGTTCAAAAGCAGGTATTGGAACTCGGGGCACTAGCAAAATTAGTAACGATGGTAAAATCTGATTTTGTAGAAGAAGCCATCAAGGCATTGTATGCTATTTCATCGTTGGTTCAAAATAATTTATCTGGCCAGGAATTATTCTATGCCGAAGCTGGAGAAACTATGCTTCAGGATATTTTAAGCAACTCGAGCATGGATATCAGATTGCAAAAGAAAGCTGTTTTTCTTGCAAGTGATTTGGCTGTGACACAACTAGAAAAAACAGATGAAGCTGAAAGGCCATTTTTTGGAGATCGCCTTTTCTTGAAGTCTGTGGTTGATCTCATCCATTCCACAGACATTGATCTCCAGGAGAAGGCCCTCATTGCTCTAAAGAACCTCCTGCTTTTGAGAACAACGAAAGCTCAAGTTTTAAGAGAATTTTGTGGGTTGGATGTTGCTTTGGAGAGGATGAGGGTGAAGCTGGAGGTATTAAAGGAAGGGGAAGATCACCGAGATTATGCAATGGATGTGGAAGATCTACGAAGCCAAGTGGAGTTACTTTTCCTTGAAAAGCTGGGAAAGAGAATGCAGCGGCCGGCGGCATCTTTCTCTCACGAACATCCATCCCGGCGGCATCTTTCTCTCTCGAGCACCCATCCCGCCGTATTTTCATTTATTACGATGGCTGATGCTCATGAAACTGATAAGAACATTGAAATATGGAAAATTAAGAAGTTGATTAAAGCACTTGAAGCTGCAAGAGGTAATGGGACTAGCATGATCTCTCTCATCATGCCTCCGCGTGATCAAATATCTCGTGTTACTAAGATGCTTGGTGATGAATTTGGAACTGCTTCGAACATTAAGAGCAGGGTAAATCGTCAATCTGTTTTGGGTGCTATCACGTCTGCTCAGCAGAGACTCAAGCTGTATAACAAGGTTCCTCCAAATGGGCTTGTGCTTTATACTGGGACAATCGTGACTGAAGATGGAAAAGAAAAGAAAGTCACAATTGATTTTGAGCCTTTCAGGCCTATAAATGCATCTCTTTATCTCTGTGACAACAAGTTCCACACGGAAGCTCTGAATGAACTGTTAGAATCTGATGACAAGTTTGGCTTCATTGTCATGGATGGTAATGGAACTCTCTTTGGCACATTGAGTGGTAACACACGTGAAGTCCTTCACAAATTTAGTGTCGACCTTCCTAAGAAACATGGAAGAGGAGGTCAGTCAGCACTTAGGTTTGCCCGTCTTCGGATGGAGAAGCGGCACAACTATGTGAGGAAAACAGCAGAGCTTGCAACCCAGTTCTTTATTAATCCTGCCACTAGTCAACCCAATGTTGCAGGATTGATACTGGCTGGATCAGCTGACTTCAAAACAGAGCTCAGTCAATCCGACATGTTTGATCCTCGTCTTCAGGCCAAAATACTTAATGTTGTCGATGTCTCTTATGGAGGGGAAAATGGATTCAATCAAGCTATTGAATTGTCATCCGAGATCTTGTCGAATGTAAAATTTATACAGGAGAAGCGCTTGATTGGAAAATACTTTGAAGAGATTAGCCAGGACACAGGGAAGTATGTTTTTGGTGTTGACGACACACTGAAAGCTCTGGAGATGGGTGCTGTTGAAATACTTATTGTTTGGGAAAATTTAGATATCAATAGGTATGTATTAAAGAATGCTGCCACTGGTGAGATTATTATAAAGCACTTGAACAAGGAACAGGAAGCCAATCAGAGCAACTTTCGTGACACCGCCACCTCTGCTGAGTTGGAGGTTCAAGAAAAGATGGCCTTGCTGGAATGGTTTGCAAACGAGTACAAGAAGTTTGGTTGCACCCTGGAGTTCGTTACCAACAAATCACAGGAAGGATCACAGTTCTGCAGAGGTTTTGGTGGTATTGGAGGAATTCTTCGTTACCAGCTTGACATAAGATCGTTTGATGAACTATCTGATGGGGAAGAGTACGGTGATTCTGAATAG | 2631 | 43.14 | MGKEKLPTHLWNFQVLKSKYMGRSLVAGLCLWFSLTLVIADANDSSLGGLVWSSAKEEGDLLIEHRPQEDSAAATPVVHDADGFDGGFSSLDSMLQWAIGHSDPAKLKDTAQDVKRLSPSEIKKRQEEIKDLIEELKVPSDAKLMQIAIDDLKNSSLSLEDRHRALQELLVLVEPIDNANDLDKLGGLAVLIHELNHFDPDIRKVAAWILGKASQNNPIVQKQVLELGALAKLVTMVKSDFVEEAIKALYAISSLVQNNLSGQELFYAEAGETMLQDILSNSSMDIRLQKKAVFLASDLAVTQLEKTDEAERPFFGDRLFLKSVVDLIHSTDIDLQEKALIALKNLLLLRTTKAQVLREFCGLDVALERMRVKLEVLKEGEDHRDYAMDVEDLRSQVELLFLEKLGKRMQRPAASFSHEHPSRRHLSLSSTHPAVFSFITMADAHETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVEILIVWENLDINRYVLKNAATGEIIIKHLNKEQEANQSNFRDTATSAELEVQEKMALLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDIRSFDELSDGEEYGDSE | 876 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 1683433 | 1691176 | - | CePI673135_06g001650.1 | Cec06g0165 | 204902 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec06g0165 | 876 | Pfam | eRF1 domain 3 | 721 | 858 | IPR005142 | - | |
Cec06g0165 | 876 | Gene3D | - | 719 | 876 | IPR029064 | - | |
Cec06g0165 | 876 | Gene3D | eRF1 domain 1 | 437 | 575 | IPR024049 | - | |
Cec06g0165 | 876 | FunFam | Peptide chain release factor subunit 1 | 719 | 876 | - | - | |
Cec06g0165 | 876 | FunFam | Eukaryotic peptide chain release factor subunit 1 | 576 | 717 | - | - | |
Cec06g0165 | 876 | SUPERFAMILY | Translational machinery components | 582 | 716 | - | - | |
Cec06g0165 | 876 | SUPERFAMILY | N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 | 446 | 580 | IPR024049 | - | |
Cec06g0165 | 876 | Pfam | Nucleotide exchange factor Fes1 | 91 | 182 | IPR013918 | - | |
Cec06g0165 | 876 | PANTHER | PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 | 442 | 867 | IPR004403 | GO:0002184(PANTHER)|GO:0003747(InterPro)|GO:0005829(PANTHER)|GO:0006415(InterPro)|GO:0016149(PANTHER)|GO:0018444(PANTHER)|GO:1990825(PANTHER) | |
Cec06g0165 | 876 | Pfam | eRF1 domain 2 | 584 | 717 | IPR005141 | - | |
Cec06g0165 | 876 | Pfam | eRF1 domain 1 | 457 | 579 | IPR005140 | - | |
Cec06g0165 | 876 | SMART | eRF1_1_2 | 444 | 580 | IPR005140 | - | |
Cec06g0165 | 876 | Coils | Coil | 149 | 169 | - | - | |
Cec06g0165 | 876 | NCBIfam | peptide chain release factor aRF-1 | 452 | 857 | IPR004403 | GO:0003747(InterPro)|GO:0006415(InterPro) | |
Cec06g0165 | 876 | FunFam | Eukaryotic peptide chain release factor subunit 1 | 442 | 575 | - | - | |
Cec06g0165 | 876 | Gene3D | eRF1 domain 2 | 576 | 717 | IPR042226 | - | |
Cec06g0165 | 876 | SUPERFAMILY | ARM repeat | 130 | 361 | IPR016024 | - | |
Cec06g0165 | 876 | Gene3D | - | 124 | 409 | IPR011989 | - | |
Cec06g0165 | 876 | SUPERFAMILY | L30e-like | 718 | 860 | IPR029064 | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec06g0165 | K03265 | - | csv:101218139 | 842.802 |