Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g0196 ATGGCCGACGGCAAGTTCGATCTCCCTGACGATCTTCTCTCCTCCCGCCCTTCCGATCACTCCTGGACACCCAAAGTGGAAGCTTCTGGAGGGAATGACGAGGAGAAGGTGCTCTCGTCCTTCCTTGACGAGTCAAAAGACCCAGTGGCTTCAGAGAACAGCATACCTTTGTCCCCTCAATGGCTATATGCCAAACCAAGTGAAACTAAGATGGAAGTGCGTGCTCCAACACCAGTGTCCCTTGCTAACTCAACTGATCTCAATCAGAAAGAGGGTTGGCGCCCTGATGGGTCCGAGGACAAGAAAGATTGGAGGAAGAGTACTTCTGAAAATGAAAGTGGCCGCCGTTGGCGAGAGGAAGAGCGAGAAACTGGCTTACTTGGTGGTCGCCGCAGGAAAACTGAGCGCCGCATTGATAACATGTCAACTAAAGAGGCAATGGAGAGTAGAGTTCTGACTAATTCGGATAGATGGCATGATGGTCGCACTTCTGGGCATGATAGTCGCACTTCTGGTCATGACGGTCGTACTTCTGGACATGATGGCCGTACTTCTGGGCATGATAGTCGTACTTCTAGTCATGATGCACGACGTGACAACAAATGGACGTTGAGATGGGGACCAGATGACAAAGAAAAGGAATCACGGATGGACAAGCGTTCAGATACTGATAAGGAAGATGTTCGCAATGACAGTCAATCAGTGAGTGGCAATCGCCCTACTTCTGAGCGTGATTCTGAATCGCGTGATAAATGGAGGCCTCGCCATAGGATGGAAAGCCATTCTGTTGGCTCAACTTCCTCTCGCGCTGCACCTGGTTTTTCACTTGAGAGAGGGCGGGGAGATGGGGGGTCTAATTTAGGATTTACAATTGGAAGAGGAAGGGCAAATACTATTGGGAGATCGTCTACTGGTCTCATTGGAGTTCCACACTTGGATAAGATTGAAAATGTTCCTGGGAAACCAAGATACTCATCTCATACTTTTTGTTACCCCAGGGGCAAGCTTCTTGACATATATAGGAGGCAGAAATCTAATCCATCGTTCTCAGCTCTGCCTGATGATATGGAAGAATTGCAGCCTGTGACTCAACCTTGTGTTGTAGAACCATTAGCTTTTGTTTCTCCAGATGCTGAAGAGGAGACTACCCTTAGTGACATATGGAAGGGGAAAATCACCAGTAGCGGGGTTGTTTACAATTCACATAAGAAGGGGAAGCTAGCTGAATGTGTTTTAGGAGATGTAGACTCCATAGATGGATATCAGACTGGGCTGGATTCAACTTTAGAGTCTGAGAATATAGCAGCAACTCCGGTTGAAGATATTGCTAATGTGACTCATGAAGTTACTAATGATGAAGCATGCCAAGATGCTAGTGACAGGAGCATTTGGAGTCATCCTTCAATGAGAGATGTCCTAGATGGAAAATATGTCAGCCATAAGGAAGATGATAAAAGGTCTAGTGCCATTTCTACGTCAAACTCTGGTGGATTGGCCCACACAGTTTCTTCAGTAGCCTCCCAACGTGGGATGGAGATTGGTGGACACCCTGGTACTCAGCTAAATGTTGGTGTCAATGGGCGAGCAGATTCTGATCATAAAAAGCCTCATAACTTTGATGAAAATGAGTTTGCCAATTCGTTTGATGCCAGATCCAAGCTTTCTGATGATCCTAGCTCTATTTTCTTTATTCCCTTCTCTGAGCAAAATCCAAATAAAAGTTCTGATGTGAAATCTGAGGAGATGAGTTTGTTCTATCTTGATCCTCAAGGGGTTATACAGGGGCCTTTTATTGGGGCTGACATCATCTTGTGGTATGAACAAGGTTTCTTTGGGTTGGACCTGCCTGTTCGGTTGGCAGATGCCCCTGAGTCCCCATTTTGTGAGTTGGGGGAGGTTATGCCACATTTGAAAGTTAGAGAGGGAAGTGTTGATTGTGCTGATACGAAATCTCTTTCAGGCCAGTCTGGTGCCTCAGGAGGAATAATGGAGACCAATTTACCTTCTAAGCATCCAGCTCTTGATGCGAATGATGCATCCACAACAAATGAGGTTCATCGGTCACTTGCTGAGTTACATAGCCTCTCCAATCAACACATTTCATCTGGAATGTCTGAGACTGAAGCACCATTTCAATTGCATTCCAAGGGTCAAAGCTTTCATGATGTTGTTGCTCAGGATGAAGAAATTGTGTTTTCTGGAAGACCTGGAAATGATGGCTACCAATTTCCAAACTCTTCTGGGGTACTGCCTATGGTGAATTCTATCAGCCAACCTTCTCTTTTGAATGAGTTAACTGACCGCAGTGTGCCTGTTCAGAATGAAAATAAGTTGCACCCTTTTGGATTGCTGTGGTCTGAGCTGGAAGGTACAAATATGAAACCAATTGAAGTTACAAATTCGAAACATACCAAGTCAGCTAACATGCCTTCAAGCATGGTAAGAACTGCACCATTAGTTGGGAAGCCGGAAGCATCTCTTAATGCAGAGACTTGGCTTGATGTTTACAGAAGAAGTATGCATTCTGACCAGAGCATATACCAGGATGCGAGTGTTGCTCATTCGTTGCCACATATAGAACAGGAATCTAATAGGTTTGATTTGGCAGATCAACTCATGTCACATCAATATCATCAGGCACTTCAACAGCGGAATTTGTTGTCTCACTCTAATGAAGCTACTTTAGATCATCATATGCAACAGCAGAATTTTATTCACCAGCAGCAGCTGTTGGCTAATAGAAGTACACCCGATCTCGATCATTTCTTGAACTTGCAGATGCAACAGCAACAGCAACGTCAGCTGCAGTTACAGCATCAATTACAACAGCAGCAGTTGCAGCAGCAGCAAAAGCTTTTGCAGGAACAACATCAGTCTCAAGTCCAGCAGGTACTGCTTGAACAGTTGTTGCGTCGACAAATGCATGATTCAGGCCTTGGGCCGACACATATTGATCCAATTAGAGCCAATAATGCTCTTGATCAGGTGATGATGGAGCAGCGTCTTTTACATGAGCTACAGCAACAATCTCATCATCAACAAAGATCTGTTGATCCATCTTTTGAGCAGCTTTTCAAAGCGAAGTTTGGTCACTTGCCACCACACCAAGAACAAAGAGATCTGTCTGAATTAATATCTCGGGCTCAGCATGGACAGATACAATCATTGGATCATCAACTGCTCCAGCAGGAGATGCTACAGTCGAGACAGTTGTCTATGGCATTAAGGCAGAGGGCCAATATGGAGGACAAGAGACATGTTGGTGGTCCTATCTGGCCAGAGGATGAGGCTGATCAGCAGTTTTTCAGAGGACATACTGGCACACAACGCTTACCGACTTCAGGGTTTGAATTATACCAGCATCAACAGAGGCAAGCTCATGCAGACCAGCTGAATCACCTTGAGCGCAATCTTTCCTTTCAAGATCGGTTTAGACTAGGTCTTTATGAGCCTGCTTCACTTCCACTCGAGAGATCAATATCCTATCCTGATGTTGCTCAGGGGATGAATCTGGATGTTGTTAATGCTATGGCTCGTGCTCGGGCTTTAGAATTGCAAGAATCTAGTGCACATAATCCACCTGGTGGTCAACTGGGGCAATATGCACCCGGTACCATTCCACAGAATCATCATCACTCTCTAGTCGGTAACCAGTTTCACGTTTCACATTTTGATGGAACTGAAGGCAGCTGGTCTGAGAAAAATGAGCGACTTGGAAATGATTGGATGGAGTCTCGCATTCAACAACTGCATATAAATGCTGAGCAACAGAAAAGGGAGTTGGAAGCTAAAATGATTTCCGAGGATCCAACTTTATGGATGTCAGATGGGCTGAATGATGAGAAGTCAAAGCAGTTATTAATGGAACTCCTCAATCAGAAATCTGTTCATCAACCTACAGAATCCTTGGATGTAGGAAGTGGAGCATCTGTCAATAGAGCATCATCTGGCCTCTATTCTGGATCAGGCTCTCTTGAACAGTCGTTCATTCTTCATTCAGGCAAGGAAAGAGGTATGAACAACACATTGCCAGTGGGGTCTTATGGTCCTAATTCTTATGAACCACTGCAAGATGAGCATCCTGGCAGCTTGACCAGCAATGAGAAGGTCCCATACAGGTCGGATTCTGTCTCTGTTGTCAAGGGAGCATCAATTTTGGCTGGTCTTAAAGCCAATGGTGCGGTTAACAGCTCTAGTTCCGGCATGGCTGGCAACCTTTCTATGAATAGAGATGTCTTAGAGGTGGAGGGCAGGGCGCGAGGATTGAAAGGTGAGGGTTTGATGAAAACTCAAGCCTTTCAAATTCAAGAAAGCATGCTTGATCAAGTGGCATCTGCTGATCGTGGGGAATTTTCAATGGATACTCATACCCTTAGTCGGCATTCGTCTCTTGGTTCTGCTGGCTTTCACAATGAAAAGATTGCCAATACGTTTCCTGAAGAGGTTGCTAAAGACCAGGCGACTATTCACAATAAAGATAACACTTTATTGAAACGCCCTCCCGTCTCACGCACTTCGGCATCCCAGGATAGTTTGTCTGTCCTGATTCCAGATCCGGTTGTCAGAGGGAAGAATTCAGATGGTGGAAGACCGGACCCGACTGGTATCTTGGTGAACCAAGAAAATATGGCAGCCATGAAGAAAGAGATGCGTTTCCGTCGCTCTTCTTCTTGTAGTGACAGTGACGTGTCGGAGGCTTCTTTTATTGATATGCTGAAGAAGACAGCTCCACAAGAAGCCCATTTGACGACGGCAGGAGTTTCGGAGCCATCTGATGGAATGCAGGGAGGGAAAGGTGGGAAGAAGAAAGGGAAGAAGGGGAGACAGATAGATCCCGCTCTACTCGGTTTCAAAGTCACCAGCAACCGAATTATGATGGGTGAAATTCAACGCTTAGATGATTAG 4905 45.42 MADGKFDLPDDLLSSRPSDHSWTPKVEASGGNDEEKVLSSFLDESKDPVASENSIPLSPQWLYAKPSETKMEVRAPTPVSLANSTDLNQKEGWRPDGSEDKKDWRKSTSENESGRRWREEERETGLLGGRRRKTERRIDNMSTKEAMESRVLTNSDRWHDGRTSGHDSRTSGHDGRTSGHDGRTSGHDSRTSSHDARRDNKWTLRWGPDDKEKESRMDKRSDTDKEDVRNDSQSVSGNRPTSERDSESRDKWRPRHRMESHSVGSTSSRAAPGFSLERGRGDGGSNLGFTIGRGRANTIGRSSTGLIGVPHLDKIENVPGKPRYSSHTFCYPRGKLLDIYRRQKSNPSFSALPDDMEELQPVTQPCVVEPLAFVSPDAEEETTLSDIWKGKITSSGVVYNSHKKGKLAECVLGDVDSIDGYQTGLDSTLESENIAATPVEDIANVTHEVTNDEACQDASDRSIWSHPSMRDVLDGKYVSHKEDDKRSSAISTSNSGGLAHTVSSVASQRGMEIGGHPGTQLNVGVNGRADSDHKKPHNFDENEFANSFDARSKLSDDPSSIFFIPFSEQNPNKSSDVKSEEMSLFYLDPQGVIQGPFIGADIILWYEQGFFGLDLPVRLADAPESPFCELGEVMPHLKVREGSVDCADTKSLSGQSGASGGIMETNLPSKHPALDANDASTTNEVHRSLAELHSLSNQHISSGMSETEAPFQLHSKGQSFHDVVAQDEEIVFSGRPGNDGYQFPNSSGVLPMVNSISQPSLLNELTDRSVPVQNENKLHPFGLLWSELEGTNMKPIEVTNSKHTKSANMPSSMVRTAPLVGKPEASLNAETWLDVYRRSMHSDQSIYQDASVAHSLPHIEQESNRFDLADQLMSHQYHQALQQRNLLSHSNEATLDHHMQQQNFIHQQQLLANRSTPDLDHFLNLQMQQQQQRQLQLQHQLQQQQLQQQQKLLQEQHQSQVQQVLLEQLLRRQMHDSGLGPTHIDPIRANNALDQVMMEQRLLHELQQQSHHQQRSVDPSFEQLFKAKFGHLPPHQEQRDLSELISRAQHGQIQSLDHQLLQQEMLQSRQLSMALRQRANMEDKRHVGGPIWPEDEADQQFFRGHTGTQRLPTSGFELYQHQQRQAHADQLNHLERNLSFQDRFRLGLYEPASLPLERSISYPDVAQGMNLDVVNAMARARALELQESSAHNPPGGQLGQYAPGTIPQNHHHSLVGNQFHVSHFDGTEGSWSEKNERLGNDWMESRIQQLHINAEQQKRELEAKMISEDPTLWMSDGLNDEKSKQLLMELLNQKSVHQPTESLDVGSGASVNRASSGLYSGSGSLEQSFILHSGKERGMNNTLPVGSYGPNSYEPLQDEHPGSLTSNEKVPYRSDSVSVVKGASILAGLKANGAVNSSSSGMAGNLSMNRDVLEVEGRARGLKGEGLMKTQAFQIQESMLDQVASADRGEFSMDTHTLSRHSSLGSAGFHNEKIANTFPEEVAKDQATIHNKDNTLLKRPPVSRTSASQDSLSVLIPDPVVRGKNSDGGRPDPTGILVNQENMAAMKKEMRFRRSSSCSDSDVSEASFIDMLKKTAPQEAHLTTAGVSEPSDGMQGGKGGKKKGKKGRQIDPALLGFKVTSNRIMMGEIQRLDD 1634
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2030391 2038995 + CePI673135_06g001960.1 Cec06g0196 204933

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g0196 1634 PANTHER GYF DOMAIN-CONTAINING PROTEIN 1 1634 - -
Cec06g0196 1634 SUPERFAMILY GYF domain 577 637 IPR035445 -
Cec06g0196 1634 MobiDBLite consensus disorder prediction 69 286 - -
Cec06g0196 1634 MobiDBLite consensus disorder prediction 92 232 - -
Cec06g0196 1634 CDD GYF 581 638 IPR003169 GO:0005515(InterPro)
Cec06g0196 1634 MobiDBLite consensus disorder prediction 242 262 - -
Cec06g0196 1634 SMART gyf_5 582 636 IPR003169 GO:0005515(InterPro)
Cec06g0196 1634 MobiDBLite consensus disorder prediction 1347 1369 - -
Cec06g0196 1634 Coils Coil 925 947 - -
Cec06g0196 1634 Coils Coil 989 1009 - -
Cec06g0196 1634 ProSiteProfiles GYF domain profile. 581 631 IPR003169 GO:0005515(InterPro)
Cec06g0196 1634 MobiDBLite consensus disorder prediction 1583 1610 - -
Cec06g0196 1634 Pfam GYF domain 585 622 IPR003169 GO:0005515(InterPro)
Cec06g0196 1634 Coils Coil 1240 1264 - -
Cec06g0196 1634 Gene3D - 568 651 IPR035445 -
Cec06g0196 1634 MobiDBLite consensus disorder prediction 1 35 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g0196 K18730 - - csv:101204211 2766.49
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec06g0196 Cec-Chr6:2030391 Cec08g1563 Cec-Chr8:27239655 4.80E-24 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1304 . . . . Bpe13g00818 . . . . . . . . . . . . . . . . . . . Cla06g00177 Cam06g0034 Cec06g0196 Cco06g0191 Clacu06g0193 Cmu06g0187 Cre06g0959 . . . . . . . . Blo02g00198 . . . Bpe14g00803 . . . . . . . . . . . . Bhi12g02418 . . . Hepe03g1143 . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003820 2 2 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 4 1 2 44