Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec06g0201 ATGGCAGACCACAACAACAACAACAACAACAAGCCATCAGTTGCAGCTTCATCAACTCCAATTACTCCATTACCACCTTCCTCAGATATCAAAGACTTCAGTCTCATTATTGCTAACAAAGATCAAAACAAGAAACAACAACAACATCAACAACAACAATTGGCTCCTAAACGTACCTCCAATAAAGACCGTCACAAGAAAGTCGACGGCCGTGGTCGTAGGATCCGTATGCCTGCTCTCTGCGCTGCCCGTGTCTTTCAATTGACTCGCGAATTAGGCCATAAGACTGATGGCGAAACCATCCAGTGGCTTCTCCAACAAGCTGAGCCTTCCATCATCGCCGCCACTGGCTCCGGTACTATCCCTGCCTCCGCTCTCCACGTTGCTGGTGTTTCCCTTTCCGACCATGATTCCTCTGTCTCCGTCTCTGCTACCTTAACCCCCAAAATCGACGCGGTTCCCAGGTCGAATTGGCCGATGATGGGAGCCAATTTGAATAGATCTCACATGGCGACGCCTGGATTCTGGCCGTCCTTAGGCGGAATCGGCACCGGATTCGTCAGTGAGAATTCGGGTTCGATTATGCCGAAATTCGGGTTCCATGGATTTGAATTTCAAGGGATGAATTTGGGATCGGTGAATTTCCCGACGATAATTGGGAATCAACACCAACAAATACCGGGGCTGGAGTTAGGGCTTTCGCAGGATGGGAATAATCTGAGAGGGATGTTGAATCCGCCTTCGTATTCTCAAATTTATCACCAAATAGGGCTAAATCGGGAATCCTCTGCAGCGGCGCCATTGGAGCAGGATCAAGCTCCTGATAAAGACGATTCTCAAGAATCGAGATAA 852 48.59 MADHNNNNNNKPSVAASSTPITPLPPSSDIKDFSLIIANKDQNKKQQQHQQQQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIPASALHVAGVSLSDHDSSVSVSATLTPKIDAVPRSNWPMMGANLNRSHMATPGFWPSLGGIGTGFVSENSGSIMPKFGFHGFEFQGMNLGSVNFPTIIGNQHQQIPGLELGLSQDGNNLRGMLNPPSYSQIYHQIGLNRESSAAAPLEQDQAPDKDDSQESR 283
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2083440 2084291 - CePI673135_06g002010.1 Cec06g0201 204938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec06g0201 283 MobiDBLite consensus disorder prediction 1 74 - -
Cec06g0201 283 ProSiteProfiles TCP domain profile. 61 115 IPR017887 -
Cec06g0201 283 Pfam TCP family transcription factor 59 143 IPR017887 -
Cec06g0201 283 MobiDBLite consensus disorder prediction 39 57 - -
Cec06g0201 283 MobiDBLite consensus disorder prediction 260 283 - -
Cec06g0201 283 MobiDBLite consensus disorder prediction 1 25 - -
Cec06g0201 283 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 29 259 IPR005333 GO:0003700(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0043565(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g2244 Cec-Chr2:39879017 Cec06g0201 Cec-Chr6:2083440 2.30E-20 dispersed
Cec05g1534 Cec-Chr5:20053651 Cec06g0201 Cec-Chr6:2083440 4.20E-54 dispersed
Cec06g0201 Cec-Chr6:2083440 Cec11g1393 Cec-Chr11:28166933 2.30E-27 dispersed
Cec06g0201 Cec-Chr6:2083440 Cec06g1822 Cec-Chr6:31656827 3.00E-30 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
29719 PF03634 TCP 1.20E-30 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec06g0201 - - - 0.0