Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec06g0214 | ATGTATTGGAAACTCAGAGGCATTGGTAATATGGATGAAAGGTCTACGGATGACATGAAAGGAACTAGAGTTGCTTTGATGGAGTCATCGTCTTCGAGATTAATGAAGAGGTCACGTGCCCCTGGAAGCGTAGCCCAAGTCCCTTCGTGTATGGTTGATGGCTGCAGTTCAGACCTTAGCAAATGCAGGGACTATCATCGTCGCCATAAAGTATGCGAGCTCCATTCTAAAACACCGAAAGTAACCATTTGCGGTCAGGAACAACGATTCTGCCAGCAGTGTAGCAGATTCCATTCGTTGGTGGAGTTTGATGATCGAAAACGAAGCTGTAGGAAACGTCTTGATGGGCACAACCGACGTCGAAGAAAGCCTCAACCAGCGACTATGACACTAAATGCAGGAAGATTTCTCTATGGCAACCAAGGTCCAAGATTCTTGCCATTTGGCAATCAATTACTGTCTGCCAGCAATGATGTGAGCTCTTCTTGGATTGGAATGATCAAACCCGAGAACAACACGCCTCTTTGCAGTGGCAACTCACAGTTCGACTTTACTGACAGAAGAAAAAGTATGTTGCCCGGGTCGTTGGCTTTTGATTACAAAGAAAAACAACTTGCAATCTCTTGCATTCCCATAGGACTGTTTCCCAAATCATCTGATACTCAGCCATTTCTCAATGTTGGATCCAGCAACGTAGGGAATGTTCAGAAAGTGCTCGGAAACGGATCAAATCGGTTCTTCAACTCTGACTGTGCTCTCTCTCTTCTGTCAACACCAGTTGAGCCTGGGGAGATTAATCTAAGCTCCATGAGCCAACCCAACCTCATCCCCCCAGCCAATTTCATCCACAGCGACGGTCTTGGCTTGGAGAGTGACCCCATTAATTCTGGTTTGGTCTCGGATGGTAGCAGCGATGCCAATATCCGGTGCTACTCAACGTTCCAGGACGGACCTGATGGATCATCTGTTGATTTATTCAGGTTTTGA | 987 | 46.4 | MYWKLRGIGNMDERSTDDMKGTRVALMESSSSRLMKRSRAPGSVAQVPSCMVDGCSSDLSKCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPENNTPLCSGNSQFDFTDRRKSMLPGSLAFDYKEKQLAISCIPIGLFPKSSDTQPFLNVGSSNVGNVQKVLGNGSNRFFNSDCALSLLSTPVEPGEINLSSMSQPNLIPPANFIHSDGLGLESDPINSGLVSDGSSDANIRCYSTFQDGPDGSSVDLFRF | 328 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 2224405 | 2226190 | + | CePI673135_06g002140.1 | Cec06g0214 | 204951 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec06g0214 | 328 | FunFam | Squamosa promoter-binding-like protein 14 | 42 | 111 | - | - | |
Cec06g0214 | 328 | Pfam | SBP domain | 50 | 123 | IPR004333 | GO:0003677(InterPro) | |
Cec06g0214 | 328 | PANTHER | SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 | 27 | 297 | IPR044817 | GO:0003677(InterPro) | |
Cec06g0214 | 328 | Gene3D | - | 42 | 111 | IPR036893 | GO:0003677(InterPro)|GO:0005634(InterPro) | |
Cec06g0214 | 328 | ProSiteProfiles | Zinc finger SBP-type profile. | 47 | 124 | IPR004333 | GO:0003677(InterPro) | |
Cec06g0214 | 328 | SUPERFAMILY | SBT domain | 48 | 129 | IPR036893 | GO:0003677(InterPro)|GO:0005634(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec01g1706 | Cec-Chr1:31693043 | Cec06g0214 | Cec-Chr6:2224405 | 7.20E-33 | dispersed | |
Cec05g1523 | Cec-Chr5:19451192 | Cec06g0214 | Cec-Chr6:2224405 | 4.40E-36 | dispersed | |
Cec06g0214 | Cec-Chr6:2224405 | Cec06g1994 | Cec-Chr6:33168652 | 6.90E-39 | dispersed | |
Cec03g0370 | Cec-Chr3:4097623 | Cec06g0214 | Cec-Chr6:2224405 | 9.50E-43 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
29720 | PF03110 | SBP | 7.40E-29 | No_clan | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec06g0214 | - | - | - | 0.0 |