Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec06g0221 | ATGATGAACGCCGGATATGATATTAATGATCTTTATCGAGAAGCACAAACCCGTTGGCTGAAGCCTCCAGAAGTGTTCTTTATTTTACAGAATCATGAGAATTATCAGCTGACTGAGGAGGCTCCTAAACAGCCAACTAGTGGTTCCTTGTTTCTTTTTAACAAGAGAGTACTCCGTTTCTTCCGTAAAGATGGTCATAGCTGGAGGAAGAAAAGGGACGGAAGAACTGTTGGAGAAGCACATGAACGACTTAAGGTTGGAAATGCTGAAGCGTTAAATTGCTATTATGCACATGGAGAGCACAACCCCAATTTCCAGAGACGTAGCTATTGGATGCTGGATCAGTCATGTGATCACATTGTTCTTGTACACTACAGAGATATCAGTGAGGAGCGGACTAAATATATTGAAGTGAATTGTCATTCATTTGTGAGAAAATACAAGATATGGTTGACAGATTTGTTCCAACTTGAGGGAAGGTCTGGGACGGAATCGGGTTCTACTTCCAGTTCCTATTCGTCCCAAAATCTTGCTTCAGAATGTCAACAGACTTCATTGAGTCCAGGGTCTGTAGAAGTTACTTCTGACACTGGCAACCTTACTATTGGGTCAAATGGCATGGATGGGCAGTATGAAATATCCGAATTAAAAAGTTCAAACGATCGTGATGTTTCTCAAGCTTTGAGAAGGATAGAGGAGCAATTAAGTTTGAATGAAGACAGCTTGAAAGACATTGGTCCATTTTATGGTCACGAGGAAGGTTCAAATTCTAACCTTATAGACTACTATGAGATGTCCAATGAGGATCAGTTTTCAGTGCTCCAGCATTCAGAAAATACTGTCCATGATAATACTTGTACGTCTGAGATGCAAGATGCTAATGGAAAACATCACCATTACAATATGGCACACGAGTTTATATTCAGTGGTGAAGGAACTCAACCATGGGGTAATGCACTTGATTCTAGTAAGACAGCCATTCTTGAGTCTCAAGACAGACATTCTCTTCTATGGAATGAAAAAGAAAATCCATCATCACCTTCGACTGTTGACAATGAACAATGCAACTGGCTGTACAGCAGAGGAAAAACTTTTCCTATGCTAGGAGGCTGCACGTCTACAGAATATTCTTCACCACTAGACAATCATGATGTTAATACCAACTACAACATACCATTTCTTAAACAAGAACATGGCAATTCTTTTGAGGTTGATACCAGTTTAATTGTTGCACAAGTGCAGAAATTTACAATCCACCAAATAGTACCGGAGCAGGGTCATGCCACCGAGAGTACCAAGGTCATCATTATTGGATCTTTTCTATGTGATCCTTCAGAATCTCCATGGGCTTGTATGTTTGGAGATATTGAAGTTCCTCTTCAGATTGTTCAGAACGGGGTACTTTGTTGCGAAGCACCTCCTCACCTCCCTGGGAAGGTTGCTCTCTGCATTACATCTGGCAATCAGGAACCCTGCAGTGAAGTCAGACAGTTTGAATATAAAATGAATGTTTGCACTCATTGCCAGTCACATTCGACTGGAGCTACGAAGAGTCCAGAGGAGCTGTTATTACTTGTCAGGCTTGTGCAATTGCTGCTCTCTGACTCATCAGTGCAGAAATCTGACAAGTTAGATTCTGAATTTTGGAGCAATAATTTGAAAGCTGGTGATGATCAATGGAGTTCTTTGATAGAGGCTCTACTAGTTGGTAGTGAAACTCCTTCTGGTGCCATTGATTGGCTTCTTCAAGAGTTGCTAAAAGACAAGTTGCGACTCTGGCTTTCTTCTCAACAGAAAGATAGGCACGATCTAGCAGGCTGTTCCTTGTCCAAGAAAGAACAAGGCATTATACACATGATTGCCGGCTTGGGCTATGTGTGGGCACTAAACCCAATTCTTGGTTGTGGAGTAAATATAAATTTCCGTGACATTAATGGATGGACTGCTCTACACTGGGCAGCACGATTTGGAAGGGAAAAAATGGTTGCTGCACTAATAGCCTCTGGAGCATCAGCTGGCGCTGTAACTGATCCTAGTTCACAAGAACCAGATGGTAAAAGTGCAGCGTCTATCGCAGACATCCATGGACACAAGGGGCTTGCTGGTTATTTATCAGAGGTTGCACTTACTAGTCATCTTTCATCCCTCACATTTGAAGAAAGTGAGCTTCCTAAAGGCTCTGCTGAGGTAGAAGCAGAAATGACGGTAAATTGCATTTCAAATGGGAACCTCTCTTCCGCGGAGGACTATATCCCTCTAAAAAATACGTTAGCTGCAGTAAGGAATGCTGCTCAGGCAGCAGCCCGTATTCAATCTGCTTTCCGTGCACATTCTTTCAGAAAGCGACAGCAGAAAGAGGCAGCTTTTGCAGCTTGTATAGATGAGTATGGAATCGATCCAAATGACATTCAGGGGCTCTTAGCTATGTCAAAGTTGAATTTTTCTAATCGGCGTGATTACAATGCTGCTGCATTATCTATACAAAAGAAGTATAGAGGTTGGAAAGGTCGTAAAGAGTTCTTATTGCTACGTCAGAAAGTCGTGAAGATACAGGCACATGTGAGGGGTTATCAAGTTAGAAAGCATTACAAAATAATTTGTTGGGCTGTCGGAATTCTTGATAAAGTTGTATTGCGTTGGAGAAGGAAAGGAGTTGGTTTGAGAGGGTTTCGTAGCGAGGTAGAATCCATTGATGAAAGTGAAGATGATGATATTATAACGGTGTTCCGCAAACAAAAGGTGGAAGGAACCATTGATGAGGCTGTTTCACGAGTGCTATCCATGGTTGACTCTCCGGATGCTCGTCAGCAATATCATCGTATGCTTCAAGGATTTCGAGAAGCCAAGGCTGAACTTGATGGTGCCAGTAACAACCCTGCAGCATTGACTTCTCTCGCCGATGTTTCTGGAATGGAAGATTGTGCCACGTGGATTTTACTGCTACCTGTCACCCTCACAGCTGCGGTTACCCATGGCGGCCATACTTCTGAAAGCCTCAATCAATGGCGGCACCCTATACTGGAAGAGCTCGATTGA | 3036 | 42.59 | MMNAGYDINDLYREAQTRWLKPPEVFFILQNHENYQLTEEAPKQPTSGSLFLFNKRVLRFFRKDGHSWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQRRSYWMLDQSCDHIVLVHYRDISEERTKYIEVNCHSFVRKYKIWLTDLFQLEGRSGTESGSTSSSYSSQNLASECQQTSLSPGSVEVTSDTGNLTIGSNGMDGQYEISELKSSNDRDVSQALRRIEEQLSLNEDSLKDIGPFYGHEEGSNSNLIDYYEMSNEDQFSVLQHSENTVHDNTCTSEMQDANGKHHHYNMAHEFIFSGEGTQPWGNALDSSKTAILESQDRHSLLWNEKENPSSPSTVDNEQCNWLYSRGKTFPMLGGCTSTEYSSPLDNHDVNTNYNIPFLKQEHGNSFEVDTSLIVAQVQKFTIHQIVPEQGHATESTKVIIIGSFLCDPSESPWACMFGDIEVPLQIVQNGVLCCEAPPHLPGKVALCITSGNQEPCSEVRQFEYKMNVCTHCQSHSTGATKSPEELLLLVRLVQLLLSDSSVQKSDKLDSEFWSNNLKAGDDQWSSLIEALLVGSETPSGAIDWLLQELLKDKLRLWLSSQQKDRHDLAGCSLSKKEQGIIHMIAGLGYVWALNPILGCGVNINFRDINGWTALHWAARFGREKMVAALIASGASAGAVTDPSSQEPDGKSAASIADIHGHKGLAGYLSEVALTSHLSSLTFEESELPKGSAEVEAEMTVNCISNGNLSSAEDYIPLKNTLAAVRNAAQAAARIQSAFRAHSFRKRQQKEAAFAACIDEYGIDPNDIQGLLAMSKLNFSNRRDYNAAALSIQKKYRGWKGRKEFLLLRQKVVKIQAHVRGYQVRKHYKIICWAVGILDKVVLRWRRKGVGLRGFRSEVESIDESEDDDIITVFRKQKVEGTIDEAVSRVLSMVDSPDARQQYHRMLQGFREAKAELDGASNNPAALTSLADVSGMEDCATWILLLPVTLTAAVTHGGHTSESLNQWRHPILEELD | 1011 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 2358294 | 2377213 | + | CePI673135_06g002210.1 | Cec06g0221 | 204958 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec06g0221 | 1011 | Pfam | CG-1 domain | 14 | 127 | IPR005559 | GO:0003677(InterPro) | |
Cec06g0221 | 1011 | SUPERFAMILY | Ankyrin repeat | 615 | 706 | IPR036770 | - | |
Cec06g0221 | 1011 | ProSiteProfiles | CG-1 DNA-binding domain profile. | 8 | 134 | IPR005559 | GO:0003677(InterPro) | |
Cec06g0221 | 1011 | ProSiteProfiles | IQ motif profile. | 763 | 791 | - | - | |
Cec06g0221 | 1011 | PANTHER | CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA | 6 | 949 | - | GO:0003690(PANTHER)|GO:0003712(PANTHER)|GO:0005634(PANTHER)|GO:0006357(PANTHER) | |
Cec06g0221 | 1011 | Gene3D | - | 576 | 707 | IPR036770 | - | |
Cec06g0221 | 1011 | ProSiteProfiles | IQ motif profile. | 843 | 867 | - | - | |
Cec06g0221 | 1011 | MobiDBLite | consensus disorder prediction | 162 | 206 | - | - | |
Cec06g0221 | 1011 | ProSiteProfiles | Ankyrin repeat region circular profile. | 645 | 671 | - | - | |
Cec06g0221 | 1011 | FunFam | Calmodulin-binding transcription activator 2 | 819 | 867 | - | - | |
Cec06g0221 | 1011 | SMART | CG_1_2 | 11 | 129 | IPR005559 | GO:0003677(InterPro) | |
Cec06g0221 | 1011 | SMART | iq_5 | 842 | 864 | IPR000048 | GO:0005515(InterPro) | |
Cec06g0221 | 1011 | SMART | iq_5 | 762 | 784 | IPR000048 | GO:0005515(InterPro) | |
Cec06g0221 | 1011 | SMART | iq_5 | 819 | 841 | IPR000048 | GO:0005515(InterPro) | |
Cec06g0221 | 1011 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 765 | 871 | IPR027417 | - | |
Cec06g0221 | 1011 | Gene3D | Immunoglobulins | 411 | 504 | IPR013783 | - | |
Cec06g0221 | 1011 | SUPERFAMILY | E set domains | 417 | 500 | IPR014756 | - | |
Cec06g0221 | 1011 | SMART | ANK_2a | 645 | 674 | IPR002110 | GO:0005515(InterPro) | |
Cec06g0221 | 1011 | ProSiteProfiles | Ankyrin repeat profile. | 645 | 677 | IPR002110 | GO:0005515(InterPro) | |
Cec06g0221 | 1011 | CDD | IPT | 417 | 501 | - | - | |
Cec06g0221 | 1011 | Gene3D | - | 820 | 867 | - | - | |
Cec06g0221 | 1011 | ProSiteProfiles | IQ motif profile. | 820 | 849 | - | - | |
Cec06g0221 | 1011 | Pfam | IQ calmodulin-binding motif | 822 | 840 | IPR000048 | GO:0005515(InterPro) | |
Cec06g0221 | 1011 | Pfam | IQ calmodulin-binding motif | 845 | 864 | IPR000048 | GO:0005515(InterPro) | |
Cec06g0221 | 1011 | Pfam | IPT/TIG domain | 417 | 500 | IPR002909 | - | |
Cec06g0221 | 1011 | Pfam | Ankyrin repeats (3 copies) | 618 | 704 | IPR002110 | GO:0005515(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec04g0880 | Cec-Chr4:28534803 | Cec06g0221 | Cec-Chr6:2358294 | 5.50E-140 | dispersed | |
Cec06g0221 | Cec-Chr6:2358294 | Cec06g0470 | Cec-Chr6:5282011 | 1.20E-110 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
29722 | PF03859 | CG-1 | 5.60E-48 | No_clan | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec06g0221 | K21596 | - | csv:101222798 | 1640.94 |