Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec06g0277 | ATGGGGAAGAAAGGAGGTAGCTCATGGTTGACTGCCGTCAAAAGGGCTTTCAGATCTCCCACTAAAGATGATGATGAAAAGAGAAGAGAGAAACGCCGCTGGATTTTCAGAAAACCAACAAATCAGCCGCCGGAGCCACTCGCCGCCCACCAGCCGCCGTCTACGCCACCGGCTCTCTCCACTCATTCTGTAGCTTTAGAAGACCAGAAACATGCCCTTGCAGTGGCTGAAGCTGCCATGGTCGCCGCCAGAGCGGCTGCACAAGCCGTCCACCTCACCCGCCCTGCCCGTCCTGGATTGGATCGCCATCGCCTCGCCGCCATTGTGATTCAAACTGCCTTTAGAGGATATCTGGCAAGGAGGGCTCTACGGGCATTGAAGGGGTTGGTGAAGTTGCAGGCATTAGTGAGAGGACACAATGTGAGGAAGCAAGCAAAGACGACGCTGCAGTGTATGAAAGCATTAGTGAGAGTGCAGGAAAAAGTTCTCGATCACCGGATGCGACTTTCCCTCGAGGGTAGCCGACGGTCTACATTCAGCGACACCAACAGCGTGTATGAATCTCGCTATGCTCAAGACGTCTCCGAGAGGAAGACTATTTGTGTATCAAGAGAAGGAAGCAGAATTACGGAGGATTGGGATGAACGTGCTCACACAGTTGAAGAAGTAAAAGCAATGTTACAATATAGAAGAGATGCTGCTTTGAATCGTGACAACATTTTATCTCATTCCTTTTCTCAACAGATATGGAGGACTGGAAAGAGCCCATCAATAGGAAATCAAGCGGAGCTTGAAGAAGGACAAAAATGGCTCGACCAATGGATGGCGAAGAAGCCATGGGAGAATAGAGCAAGAGCTTCCACAGATAACAGACCACAGCCCCTTAAAACGCTCGAAATCGACACCTCTAGGCCCTACTCTTACTTATCTCCCAACAATCTCCACGCAACGAATTATCAAACGCAATCACAAAGATCGAACTCGCTTTCCTCATCCTCCCCACTCCACAGAGCCCATCACCATCAGTTCTCCATCACCCCGTCCCCATCAAAATCTCGACCGGTCCAGCAAGTTCGGTCGGCGAGTCCCCGCTACAGCAGAGAAGATAGAAACCAAATCAGCCACCACATTACATCCCAAACACCAAGCTTGAGGACAAAACATCAACATCACAAATGGGGTAGTGGTGGTGGGACTTCAATGCCAAATTACATGGCAGCAACAGAGTCAGCCAAGGCACGAGTCCGGTCGCAAAGTGCGCCGAGGCAAAGGCCAGCAACACCCGAGAGGGAACGAGTTGGAACTGCGAGGAAGCGGCTATCTTTTCCAGTACCACCGGATCCTTATGGTAGAATAGCAGGGTGCGGTGTTTATGGGGATAGCATGAAGAGCCCAAGTTTTAAGAGTGCTTGTGGAAGGTATGGTGGGTTGGAGGAACAGTCTAACTATTCTTCTTGCTATACAGAAAGCCATGGAGGAGAGGTTTCACCATCTTCAACCACTGACCTCAGAAGGTGGCTGAGATGA | 1527 | 50.49 | MGKKGGSSWLTAVKRAFRSPTKDDDEKRREKRRWIFRKPTNQPPEPLAAHQPPSTPPALSTHSVALEDQKHALAVAEAAMVAARAAAQAVHLTRPARPGLDRHRLAAIVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKTTLQCMKALVRVQEKVLDHRMRLSLEGSRRSTFSDTNSVYESRYAQDVSERKTICVSREGSRITEDWDERAHTVEEVKAMLQYRRDAALNRDNILSHSFSQQIWRTGKSPSIGNQAELEEGQKWLDQWMAKKPWENRARASTDNRPQPLKTLEIDTSRPYSYLSPNNLHATNYQTQSQRSNSLSSSSPLHRAHHHQFSITPSPSKSRPVQQVRSASPRYSREDRNQISHHITSQTPSLRTKHQHHKWGSGGGTSMPNYMAATESAKARVRSQSAPRQRPATPERERVGTARKRLSFPVPPDPYGRIAGCGVYGDSMKSPSFKSACGRYGGLEEQSNYSSCYTESHGGEVSPSSTTDLRRWLR | 508 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 3116200 | 3118522 | + | CePI673135_06g002770.1 | Cec06g0277 | 205014 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec06g0277 | 508 | SMART | iq_5 | 102 | 124 | IPR000048 | GO:0005515(InterPro) | |
Cec06g0277 | 508 | SMART | iq_5 | 125 | 146 | IPR000048 | GO:0005515(InterPro) | |
Cec06g0277 | 508 | MobiDBLite | consensus disorder prediction | 482 | 508 | - | - | |
Cec06g0277 | 508 | MobiDBLite | consensus disorder prediction | 282 | 435 | - | - | |
Cec06g0277 | 508 | PANTHER | IQ-DOMAIN 5-RELATED | 9 | 437 | - | - | |
Cec06g0277 | 508 | ProSiteProfiles | IQ motif profile. | 103 | 131 | - | - | |
Cec06g0277 | 508 | MobiDBLite | consensus disorder prediction | 1 | 61 | - | - | |
Cec06g0277 | 508 | FunFam | IQ-domain 11 | 102 | 153 | - | - | |
Cec06g0277 | 508 | Pfam | IQ calmodulin-binding motif | 130 | 146 | IPR000048 | GO:0005515(InterPro) | |
Cec06g0277 | 508 | Pfam | IQ calmodulin-binding motif | 106 | 124 | IPR000048 | GO:0005515(InterPro) | |
Cec06g0277 | 508 | Gene3D | - | 100 | 157 | - | - | |
Cec06g0277 | 508 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 88 | 148 | IPR027417 | - | |
Cec06g0277 | 508 | ProSiteProfiles | IQ motif profile. | 127 | 154 | - | - | |
Cec06g0277 | 508 | MobiDBLite | consensus disorder prediction | 17 | 38 | - | - | |
Cec06g0277 | 508 | MobiDBLite | consensus disorder prediction | 303 | 362 | - | - | |
Cec06g0277 | 508 | MobiDBLite | consensus disorder prediction | 401 | 424 | - | - | |
Cec06g0277 | 508 | Pfam | Protein of unknown function (DUF4005) | 362 | 456 | IPR025064 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec05g0021 | Cec-Chr5:246665 | Cec06g0277 | Cec-Chr6:3116200 | 1.90E-117 | dispersed | |
Cec05g0950 | Cec-Chr5:8294342 | Cec06g0277 | Cec-Chr6:3116200 | 1.10E-18 | dispersed | |
Cec06g0277 | Cec-Chr6:3116200 | Cec09g2145 | Cec-Chr9:38401423 | 2.00E-29 | dispersed | |
Cec06g0277 | Cec-Chr6:3116200 | Cec04g1024 | Cec-Chr4:29828467 | 3.10E-22 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec06g0277 | - | - | - | 0.0 |