Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec06g0288 | ATGTCGTTGAGTAGCGAAATCGAAAGCCTTTGGGTTCTGGCTTTGGCTTCCAAATGCTCAGCTCTCACTAAACAAAACATCTTTTTCTCTCTACTTCTTCTTCTCCTAATTTGGTTTTTCCTTTCCATTTTCTATTGGGCCCATCCTGGCGGCCCAGCTTGGGGCCGCCGCCGCAATTCCTCCTCCTCCTCCTCCTCCTCCTCCGCCACCATCCCTGGCCCAAGAGGCCTCCCCCTCATCGGCAGTATGAGCTTGATGACGGGTCTGGCCCACCAAAAGATCGCCGCCATGGCCAAATCTCTAGGAGCTACTCGTCTCATGGCTTTCTCACTCGCCAACACTCGCGTGATTGTCACATGCCACCCAGACGTAGCTAAAGACATCCTAAACAGTTCCGTCTTCGCTGACCGTCCGATCAAAGAATCAGCTTACTCTTTGATGTTCAATCGTGCCATTGGATTTGCTCCTTACGGACTTTACTGGCGAACCCTCCGACGAATCGCTTCACACCATCTCTTCTGCCCTAAACAAATCAAATCCTCTGAATCACAACGCCGCCAAATCGCTTCCCAAATGGTCAAAATCTTGTCTTCCACTGCCGCCACCTCATCTTCTCTCCACATTCGTCAAACTCTTAAAACCGCCTCTTTGAATAGCATGATGGGTTCGGTTTTCGGCCGGTTTTACAATCTCTCCGACTCTAATCCTGAAGTCCAACTCCTCCAAAGCCTTGTGGATGAAGGGTATGATTTACTAGGCCTTCTTAACTGGTCCGACCATCTTCCCTTTTTGGCTGATTTCGACCCACAAAAAATCCGGTTCAGATGCTCCCGGTTGGTTCCACAGGTGAACCGCTTCGTCACCCGGATCATCAACCAACATCGGCAAAATTCATCCCAACAAACCATGGATTTTGTCCATGTTCTTCTCTCTCTTCAACAAAACGACAACCTCTCTGACTCCGATATCATCTCCGTTCTTTGGGAAATGATATTTAGAGGAACAGACACGGTAGCGGTTTTAATCGAGTGGATTCTAGCGAGGATGGTGGTTCACAAGGAGGAGCAACAAAAAATACAAGAGGAATTAGATAAGGTGGTTGGGAGATCACGTGCCGTCGTGGAATCCGACATTCCGTCGTTGGTTTATTTAACCGCGGTGGTTAAGGAAGTTCTAAGGTTGCATCCACCCGGCCCACTTCTGTCTTGGGCTCGTCTTGCTATTACCGATACAATCGTCGATGGTCATCACGTGCCTCGTGGGACCACTGCCATGGTTAACATGTGGTCGATAGCGCGGGACCCACAGATCTGGTCGGACCCACTTGAATTTATTCCTGAGAGGTTTCTCTCTGGTGGTGCTGACTTGGAGTTTTCGATTATGGGTTCGGATCTACGACTAGCTCCATTCGGGTCGGGTCGGAGGACTTGTCCTGGGAAGGCACTTGCTTGGACAACTGTCACGTTTTGGGTGGCTACGCTATTACATGAATTTAAATGGTTGCCTTCTCCTGATCAAAACGACGCCGTCGACTTCTCTGAGGTTCTTAAGCTCTCTTGTGAGATGGCTAATCCACTCACGGTTAAACTATGCCCAAGGCGCACTTAA | 1608 | 49.38 | MSLSSEIESLWVLALASKCSALTKQNIFFSLLLLLLIWFFLSIFYWAHPGGPAWGRRRNSSSSSSSSSATIPGPRGLPLIGSMSLMTGLAHQKIAAMAKSLGATRLMAFSLANTRVIVTCHPDVAKDILNSSVFADRPIKESAYSLMFNRAIGFAPYGLYWRTLRRIASHHLFCPKQIKSSESQRRQIASQMVKILSSTAATSSSLHIRQTLKTASLNSMMGSVFGRFYNLSDSNPEVQLLQSLVDEGYDLLGLLNWSDHLPFLADFDPQKIRFRCSRLVPQVNRFVTRIINQHRQNSSQQTMDFVHVLLSLQQNDNLSDSDIISVLWEMIFRGTDTVAVLIEWILARMVVHKEEQQKIQEELDKVVGRSRAVVESDIPSLVYLTAVVKEVLRLHPPGPLLSWARLAITDTIVDGHHVPRGTTAMVNMWSIARDPQIWSDPLEFIPERFLSGGADLEFSIMGSDLRLAPFGSGRRTCPGKALAWTTVTFWVATLLHEFKWLPSPDQNDAVDFSEVLKLSCEMANPLTVKLCPRRT | 535 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 3306613 | 3308304 | + | CePI673135_06g002880.1 | Cec06g0288 | 205025 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec06g0288 | 535 | FunFam | Cytochrome P450 78A5 | 63 | 533 | - | - | |
| Cec06g0288 | 535 | Pfam | Cytochrome P450 | 72 | 508 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec06g0288 | 535 | CDD | CYP78 | 102 | 526 | - | - | |
| Cec06g0288 | 535 | PRINTS | E-class P450 group I signature | 342 | 368 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec06g0288 | 535 | PRINTS | E-class P450 group I signature | 322 | 339 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec06g0288 | 535 | PRINTS | E-class P450 group I signature | 427 | 451 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec06g0288 | 535 | PRINTS | E-class P450 group I signature | 215 | 233 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec06g0288 | 535 | PRINTS | E-class P450 group I signature | 385 | 403 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec06g0288 | 535 | PRINTS | E-class P450 group I signature | 477 | 500 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec06g0288 | 535 | PRINTS | E-class P450 group I signature | 467 | 477 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec06g0288 | 535 | PRINTS | P450 superfamily signature | 386 | 397 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec06g0288 | 535 | PRINTS | P450 superfamily signature | 468 | 477 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec06g0288 | 535 | PRINTS | P450 superfamily signature | 333 | 350 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec06g0288 | 535 | PRINTS | P450 superfamily signature | 477 | 488 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec06g0288 | 535 | SUPERFAMILY | Cytochrome P450 | 71 | 533 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec06g0288 | 535 | PANTHER | CYTOCHROME P450 78A7-RELATED | 5 | 529 | IPR051996 | - | |
| Cec06g0288 | 535 | MobiDBLite | consensus disorder prediction | 56 | 72 | - | - | |
| Cec06g0288 | 535 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 470 | 479 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cec06g0288 | 535 | Gene3D | Cytochrome P450 | 56 | 530 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cec06g0288 | 535 | MobiDBLite | consensus disorder prediction | 54 | 74 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cec06g0288 | Cec-Chr6:3306613 | Cec11g1421 | Cec-Chr11:28400575 | 1.50E-128 | dispersed | |
| Cec06g0288 | Cec-Chr6:3306613 | Cec08g1078 | Cec-Chr8:22611547 | 9.20E-134 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec06g0288 | K20619 | - | csv:101216159 | 918.302 |